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MS026247 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026247
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold63:415467..415862
RNA-Seq ExpressionMS026247
SyntenyMS026247
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERN02758.1 hypothetical protein AMTR_s00086p00036940 [Amborella trichopoda]4.7e-0848.91Show/hide
Query:  NNPSPKIDFSIPKLSLFNRIESRCR----ILPPNHTLINPSAFPISRCDSVLFAVILKNGPKVWSRRSRFWAAPAAKISRIVGMLSSLDFSG
        N PSPKID SIP +SL   IESRC+    IL  N +L+ PSA P S   + L AV LK GPKV      FW    A  S I GM S L   G
Subjt:  NNPSPKIDFSIPKLSLFNRIESRCR----ILPPNHTLINPSAFPISRCDSVLFAVILKNGPKVWSRRSRFWAAPAAKISRIVGMLSSLDFSG
KAG9129828.1 hypothetical protein Leryth_016016 [Lithospermum erythrorhizon]9.2e-0455.56Show/hide
Query:  ILPPNHTLINPSAFPISRCDSVLFAVILKNGPKVWSRRSRFWAAPAAKISRIVG
        I P NHTL +PSA P S   S+L AV  KNGPKV + RSRF A   + IS I G
Subjt:  ILPPNHTLINPSAFPISRCDSVLFAVILKNGPKVWSRRSRFWAAPAAKISRIVG
TrEMBL top hitse value%identityAlignment
W1P4B8 Uncharacterized protein2.3e-0848.91Show/hide
Query:  NNPSPKIDFSIPKLSLFNRIESRCR----ILPPNHTLINPSAFPISRCDSVLFAVILKNGPKVWSRRSRFWAAPAAKISRIVGMLSSLDFSG
        N PSPKID SIP +SL   IESRC+    IL  N +L+ PSA P S   + L AV LK GPKV      FW    A  S I GM S L   G
Subjt:  NNPSPKIDFSIPKLSLFNRIESRCR----ILPPNHTLINPSAFPISRCDSVLFAVILKNGPKVWSRRSRFWAAPAAKISRIVGMLSSLDFSG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAATCCGAGTCCGAAGATCGATTTCTCCATTCCCAAGCTCTCTCTGTTCAATCGGATCGAATCCAGATGCAGAATCCTCCCTCCAAACCACACTCTTATCAATCC
CTCCGCCTTCCCGATTTCCCGCTGCGATTCCGTGCTTTTCGCCGTGATTCTGAAGAACGGCCCCAAGGTTTGGAGCCGGAGGTCCAGATTCTGGGCCGCGCCGGCCGCCA
AAATCTCACGCATCGTCGGTATGTTATCTTCTCTGGATTTCAGTGGTTTTGGCGATTTTGAAGGGGCTGGTAATTGGGAATTAGGGCATTTGGATGAGGAAGAGGAGGAG
GCGTGGATTTTACTAAGGAATCTTGGAATTGGCGAGAAATTTTGGGGGATTCGGGAAATTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAATCCGAGTCCGAAGATCGATTTCTCCATTCCCAAGCTCTCTCTGTTCAATCGGATCGAATCCAGATGCAGAATCCTCCCTCCAAACCACACTCTTATCAATCC
CTCCGCCTTCCCGATTTCCCGCTGCGATTCCGTGCTTTTCGCCGTGATTCTGAAGAACGGCCCCAAGGTTTGGAGCCGGAGGTCCAGATTCTGGGCCGCGCCGGCCGCCA
AAATCTCACGCATCGTCGGTATGTTATCTTCTCTGGATTTCAGTGGTTTTGGCGATTTTGAAGGGGCTGGTAATTGGGAATTAGGGCATTTGGATGAGGAAGAGGAGGAG
GCGTGGATTTTACTAAGGAATCTTGGAATTGGCGAGAAATTTTGGGGGATTCGGGAAATTGTTTGA
Protein sequenceShow/hide protein sequence
MNNPSPKIDFSIPKLSLFNRIESRCRILPPNHTLINPSAFPISRCDSVLFAVILKNGPKVWSRRSRFWAAPAAKISRIVGMLSSLDFSGFGDFEGAGNWELGHLDEEEEE
AWILLRNLGIGEKFWGIREIV