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MS026284 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026284
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING/U-box superfamily protein
Genome locationscaffold63:3260922..3261158
RNA-Seq ExpressionMS026284
SyntenyMS026284
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS28590.1 hypothetical protein Acr_00g0002670 [Actinidia rufa]2.5e-0463.27Show/hide
Query:  MRSSGLRAWEHSSNKEE-SGLNSGSACPSAARSRNGARRGRRYAPQLCC
        +RSSGL AWE    +   SGLNSG+  PSAAR  NGARRG  YAP LCC
Subjt:  MRSSGLRAWEHSSNKEE-SGLNSGSACPSAARSRNGARRGRRYAPQLCC
GFY85168.1 RING/U-box superfamily protein [Actinidia rufa]2.5e-0463.27Show/hide
Query:  MRSSGLRAWEHSSNKEE-SGLNSGSACPSAARSRNGARRGRRYAPQLCC
        +RSSGL AWE    +   SGLNSG+  PSAAR  NGARRG  YAP LCC
Subjt:  MRSSGLRAWEHSSNKEE-SGLNSGSACPSAARSRNGARRGRRYAPQLCC
KYP33254.1 hypothetical protein KK1_045899 [Cajanus cajan]2.5e-0486.21Show/hide
Query:  LHLIPTAGIDLMRPAYYYDEKSPALFLRY
        LHLIPTAGIDLMRPA+YY EKSPA  LRY
Subjt:  LHLIPTAGIDLMRPAYYYDEKSPALFLRY
TYI32627.1 hypothetical protein ES332_A04G077300v1 [Gossypium tomentosum]4.3e-0958.9Show/hide
Query:  MRSSGLRAWEHSSNKEE-SGLNSGSACPSAARSRNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAYYYDEKSP
        +RSSGLRAWE    +   SGLNSG A PSAARSRNGARRGRRYAP LCCD            RP  Y  E  P
Subjt:  MRSSGLRAWEHSSNKEE-SGLNSGSACPSAARSRNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAYYYDEKSP
TrEMBL top hitse value%identityAlignment
A0A151QSM8 Uncharacterized protein1.2e-0486.21Show/hide
Query:  LHLIPTAGIDLMRPAYYYDEKSPALFLRY
        LHLIPTAGIDLMRPA+YY EKSPA  LRY
Subjt:  LHLIPTAGIDLMRPAYYYDEKSPALFLRY
A0A5D2QVI1 Uncharacterized protein2.1e-0958.9Show/hide
Query:  MRSSGLRAWEHSSNKEE-SGLNSGSACPSAARSRNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAYYYDEKSP
        +RSSGLRAWE    +   SGLNSG A PSAARSRNGARRGRRYAP LCCD            RP  Y  E  P
Subjt:  MRSSGLRAWEHSSNKEE-SGLNSGSACPSAARSRNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAYYYDEKSP
A0A7J0D7M3 Uncharacterized protein1.2e-0463.27Show/hide
Query:  MRSSGLRAWEHSSNKEE-SGLNSGSACPSAARSRNGARRGRRYAPQLCC
        +RSSGL AWE    +   SGLNSG+  PSAAR  NGARRG  YAP LCC
Subjt:  MRSSGLRAWEHSSNKEE-SGLNSGSACPSAARSRNGARRGRRYAPQLCC
A0A7J0EFA7 RING/U-box superfamily protein1.2e-0463.27Show/hide
Query:  MRSSGLRAWEHSSNKEE-SGLNSGSACPSAARSRNGARRGRRYAPQLCC
        +RSSGL AWE    +   SGLNSG+  PSAAR  NGARRG  YAP LCC
Subjt:  MRSSGLRAWEHSSNKEE-SGLNSGSACPSAARSRNGARRGRRYAPQLCC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCTTCCGGTCTGCGTGCGTGGGAGCACAGCTCAAACAAAGAAGAGTCTGGTCTGAATTCAGGCTCGGCCTGCCCGTCTGCTGCTAGGTCCAGGAATGGTGCCAG
GCGAGGGCGCCGCTATGCCCCGCAGCTCTGCTGCGACCTTCATTTGATTCCGACGGCCGGCATAGATCTCATGAGACCCGCCTACTATTACGACGAAAAAAGCCCTGCCC
TTTTCCTTCGCTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGATCTTCCGGTCTGCGTGCGTGGGAGCACAGCTCAAACAAAGAAGAGTCTGGTCTGAATTCAGGCTCGGCCTGCCCGTCTGCTGCTAGGTCCAGGAATGGTGCCAG
GCGAGGGCGCCGCTATGCCCCGCAGCTCTGCTGCGACCTTCATTTGATTCCGACGGCCGGCATAGATCTCATGAGACCCGCCTACTATTACGACGAAAAAAGCCCTGCCC
TTTTCCTTCGCTACTAG
Protein sequenceShow/hide protein sequence
MRSSGLRAWEHSSNKEESGLNSGSACPSAARSRNGARRGRRYAPQLCCDLHLIPTAGIDLMRPAYYYDEKSPALFLRY