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MS026293 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026293
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlyco_trans_4-like_N domain-containing protein
Genome locationscaffold63:4104808..4105155
RNA-Seq ExpressionMS026293
SyntenyMS026293
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB8116295.1 hypothetical protein EE612_057325 [Oryza sativa]2.1e-1259.21Show/hide
Query:  MFVIRILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAKYSFL
        M V+R+LWF P LFGPKSS V +TAAA MKPEL P SAVP   V    +   RKNAIG+G +A  SHPV A  +FL
Subjt:  MFVIRILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAKYSFL

KAD4384970.1 hypothetical protein E3N88_25138 [Mikania micrantha]2.6e-1053.52Show/hide
Query:  ILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAKYSFL
        +LWFTP   GPK S V++TAA   KPEL PT  VP+++ ++V  +   +NAI VG S   SHPVLAKY FL
Subjt:  ILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAKYSFL

KAF2586189.1 hypothetical protein F2Q70_00034653 [Brassica cretica]1.5e-1066.67Show/hide
Query:  MFVIRILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVG
        MFVI+ILW TP  FGPKSS VMETAAANM PEL P SAVP      V D A++  AIGVG
Subjt:  MFVIRILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVG

PON56672.1 hypothetical protein PanWU01x14_178900 [Parasponia andersonii]2.5e-2161.54Show/hide
Query:  PCESYTTAASMPYSSDPIGMFVIRILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAK
        P ESYTTAAS PY SDPIGMFV+R+LW TP LF PKSS V++TAA N  PEL P  AVPM     + D A++  AIG G  A+ SHPVL K
Subjt:  PCESYTTAASMPYSSDPIGMFVIRILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAK

PON87479.1 hypothetical protein TorRG33x02_166570 [Trema orientale]1.6e-2060.44Show/hide
Query:  PCESYTTAASMPYSSDPIGMFVIRILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAK
        P ESYTTAAS PY SDPIGM V+R+LW  P LF PKSS V++TAA N  PEL P  AVPM     + D A++K AIG G  A+ SHPVL K
Subjt:  PCESYTTAASMPYSSDPIGMFVIRILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAK

TrEMBL top hitse value%identityAlignment
A0A0P0Y697 Os12g0106525 protein1.0e-1259.21Show/hide
Query:  MFVIRILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAKYSFL
        M V+R+LWF P LFGPKSS V +TAAA MKPEL P SAVP   V    +   RKNAIG+G +A  SHPV A  +FL
Subjt:  MFVIRILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAKYSFL

A0A2P5C6G8 Uncharacterized protein1.2e-2161.54Show/hide
Query:  PCESYTTAASMPYSSDPIGMFVIRILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAK
        P ESYTTAAS PY SDPIGMFV+R+LW TP LF PKSS V++TAA N  PEL P  AVPM     + D A++  AIG G  A+ SHPVL K
Subjt:  PCESYTTAASMPYSSDPIGMFVIRILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAK

A0A2P5EPN9 Uncharacterized protein7.8e-2160.44Show/hide
Query:  PCESYTTAASMPYSSDPIGMFVIRILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAK
        P ESYTTAAS PY SDPIGM V+R+LW  P LF PKSS V++TAA N  PEL P  AVPM     + D A++K AIG G  A+ SHPVL K
Subjt:  PCESYTTAASMPYSSDPIGMFVIRILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAK

A0A5N6N5L0 Glyco_trans_4-like_N domain-containing protein1.3e-1053.52Show/hide
Query:  ILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAKYSFL
        +LWFTP   GPK S V++TAA   KPEL PT  VP+++ ++V  +   +NAI VG S   SHPVLAKY FL
Subjt:  ILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAKYSFL

A0A5N6PKL0 Glyco_trans_4-like_N domain-containing protein6.2e-1052.11Show/hide
Query:  ILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAKYSFL
        +LWFTP   GPK S V++TAA   KPEL P   VP+++ ++V  +   +NAI VG S   SHPVLAKY FL
Subjt:  ILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAKYSFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACACAACCGCCTCGCCATGGCCGGAGCTTCCGTGCGAATCGTACACCACCGCCGCCAGCATGCCGTACAGCAGCGATCCGATCGGAATGTTTGTGATCAGAATATT
GTGGTTCACGCCTAAGCTGTTCGGCCCGAAGAGCTCCGCTGTTATGGAAACTGCGGCGGCGAATATGAAGCCGGAGCTCATACCGACCAGCGCCGTGCCTATGTACACGG
TCACCGTGGTGGACGACGCCGCTAACAGGAAGAATGCTATTGGAGTTGGAATTAGCGCAATCGACAGCCATCCTGTTCTTGCGAAGTACAGTTTCCTGCAGAAGAAAAAT
TGGCGGTGTTTGTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACACAACCGCCTCGCCATGGCCGGAGCTTCCGTGCGAATCGTACACCACCGCCGCCAGCATGCCGTACAGCAGCGATCCGATCGGAATGTTTGTGATCAGAATATT
GTGGTTCACGCCTAAGCTGTTCGGCCCGAAGAGCTCCGCTGTTATGGAAACTGCGGCGGCGAATATGAAGCCGGAGCTCATACCGACCAGCGCCGTGCCTATGTACACGG
TCACCGTGGTGGACGACGCCGCTAACAGGAAGAATGCTATTGGAGTTGGAATTAGCGCAATCGACAGCCATCCTGTTCTTGCGAAGTACAGTTTCCTGCAGAAGAAAAAT
TGGCGGTGTTTGTGTTAG
Protein sequenceShow/hide protein sequence
MHTTASPWPELPCESYTTAASMPYSSDPIGMFVIRILWFTPKLFGPKSSAVMETAAANMKPELIPTSAVPMYTVTVVDDAANRKNAIGVGISAIDSHPVLAKYSFLQKKN
WRCLC