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MS026294 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026294
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold317:208149..208918
RNA-Seq ExpressionMS026294
SyntenyMS026294
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153201.1 uncharacterized protein LOC111020757 [Momordica charantia]3.9e-2250.71Show/hide
Query:  PVTKERDKGKKIVDDPLEEEVWEEARPVGDGVTDEE----GNDGQAPYKKTRKNKFKKRISRRLRMLGDQVGTIEATLGGIEDTLKDIQRYLKKMPKGKF
        P + ER     + D P + E+     PV D    +E     NDG+   K+ +KNKFKKRISRRL+ L + VG IE  LG     LK IQ YLKK+ KGKF
Subjt:  PVTKERDKGKKIVDDPLEEEVWEEARPVGDGVTDEE----GNDGQAPYKKTRKNKFKKRISRRLRMLGDQVGTIEATLGGIEDTLKDIQRYLKKMPKGKF

Query:  PHPSKYFGGRGGPDEDGLSGERPDEDPKIGGGPSNMDEDR
        P  SKYFGG GGPD+DG S +RPDE PK  GG  +MDED+
Subjt:  PHPSKYFGGRGGPDEDGLSGERPDEDPKIGGGPSNMDEDR
XP_022154965.1 uncharacterized protein LOC111022110 [Momordica charantia]2.5e-0837.34Show/hide
Query:  RENPVTKERDKGKKIVDDPLE-EEVWEEARPVGDGVTD-----EEGNDGQAPYKKT--RKNKFKKRISRRLRMLGDQVGTIEATLGGIEDTLKDIQRYLK
        +++PVT E       V D +E ++V ++A P+ D VT+     + G D   P K T  +K K K + SR LR LGD+V  IE TL G+   +KDI++++K
Subjt:  RENPVTKERDKGKKIVDDPLE-EEVWEEARPVGDGVTD-----EEGNDGQAPYKKT--RKNKFKKRISRRLRMLGDQVGTIEATLGGIEDTLKDIQRYLK

Query:  KMPKGKFPHPSKYFGGRGGPDEDGLSGERP-----------DEDPKIGGGPSNMDEDR
        ++ K      +KY    G PD+DG SG R            DEDPK G  P   DE R
Subjt:  KMPKGKFPHPSKYFGGRGGPDEDGLSGERP-----------DEDPKIGGGPSNMDEDR
TrEMBL top hitse value%identityAlignment
A0A6J1DJX9 uncharacterized protein LOC1110207571.9e-2250.71Show/hide
Query:  PVTKERDKGKKIVDDPLEEEVWEEARPVGDGVTDEE----GNDGQAPYKKTRKNKFKKRISRRLRMLGDQVGTIEATLGGIEDTLKDIQRYLKKMPKGKF
        P + ER     + D P + E+     PV D    +E     NDG+   K+ +KNKFKKRISRRL+ L + VG IE  LG     LK IQ YLKK+ KGKF
Subjt:  PVTKERDKGKKIVDDPLEEEVWEEARPVGDGVTDEE----GNDGQAPYKKTRKNKFKKRISRRLRMLGDQVGTIEATLGGIEDTLKDIQRYLKKMPKGKF

Query:  PHPSKYFGGRGGPDEDGLSGERPDEDPKIGGGPSNMDEDR
        P  SKYFGG GGPD+DG S +RPDE PK  GG  +MDED+
Subjt:  PHPSKYFGGRGGPDEDGLSGERPDEDPKIGGGPSNMDEDR
A0A6J1DL40 uncharacterized protein LOC1110221101.2e-0837.34Show/hide
Query:  RENPVTKERDKGKKIVDDPLE-EEVWEEARPVGDGVTD-----EEGNDGQAPYKKT--RKNKFKKRISRRLRMLGDQVGTIEATLGGIEDTLKDIQRYLK
        +++PVT E       V D +E ++V ++A P+ D VT+     + G D   P K T  +K K K + SR LR LGD+V  IE TL G+   +KDI++++K
Subjt:  RENPVTKERDKGKKIVDDPLE-EEVWEEARPVGDGVTD-----EEGNDGQAPYKKT--RKNKFKKRISRRLRMLGDQVGTIEATLGGIEDTLKDIQRYLK

Query:  KMPKGKFPHPSKYFGGRGGPDEDGLSGERP-----------DEDPKIGGGPSNMDEDR
        ++ K      +KY    G PD+DG SG R            DEDPK G  P   DE R
Subjt:  KMPKGKFPHPSKYFGGRGGPDEDGLSGERP-----------DEDPKIGGGPSNMDEDR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGGGAAAATCCTGTAACAAAAGAAAGAGACAAAGGGAAGAAGATTGTAGACGATCCGCTAGAAGAAGAAGTTTGGGAAGAGGCCCGTCCAGTTGGCGATGGCGT
GACCGACGAAGAAGGAAATGACGGGCAAGCGCCATACAAGAAAACGAGAAAGAATAAATTCAAGAAGAGGATCAGTAGACGGTTGAGGATGCTCGGTGATCAAGTTGGTA
CTATTGAGGCCACCTTGGGTGGCATTGAAGACACCTTAAAAGATATCCAGAGGTACCTTAAGAAAATGCCAAAGGGTAAGTTCCCCCATCCGAGCAAATATTTTGGAGGT
AGGGGTGGGCCAGATGAAGATGGTCTCTCGGGTGAAAGGCCTGATGAGGACCCGAAGATAGGTGGGGGTCCGAGCAATATGGATGAGGACCGCTTCTTCATCCCTGCGAA
TCTCAATACTCCTTCTTCTGACTCTCCCAACGAGTCATATGATTCATCACTTTCATCTACGTTATCATTCCACAATCCCAGCACATCCCAATCACATACCCTGTCATCTC
TCAAGTTACATGGAACAACATCTTATCCCAATGGTGTTAAACCCGCTATATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGGGAAAATCCTGTAACAAAAGAAAGAGACAAAGGGAAGAAGATTGTAGACGATCCGCTAGAAGAAGAAGTTTGGGAAGAGGCCCGTCCAGTTGGCGATGGCGT
GACCGACGAAGAAGGAAATGACGGGCAAGCGCCATACAAGAAAACGAGAAAGAATAAATTCAAGAAGAGGATCAGTAGACGGTTGAGGATGCTCGGTGATCAAGTTGGTA
CTATTGAGGCCACCTTGGGTGGCATTGAAGACACCTTAAAAGATATCCAGAGGTACCTTAAGAAAATGCCAAAGGGTAAGTTCCCCCATCCGAGCAAATATTTTGGAGGT
AGGGGTGGGCCAGATGAAGATGGTCTCTCGGGTGAAAGGCCTGATGAGGACCCGAAGATAGGTGGGGGTCCGAGCAATATGGATGAGGACCGCTTCTTCATCCCTGCGAA
TCTCAATACTCCTTCTTCTGACTCTCCCAACGAGTCATATGATTCATCACTTTCATCTACGTTATCATTCCACAATCCCAGCACATCCCAATCACATACCCTGTCATCTC
TCAAGTTACATGGAACAACATCTTATCCCAATGGTGTTAAACCCGCTATATCATGA
Protein sequenceShow/hide protein sequence
MKRENPVTKERDKGKKIVDDPLEEEVWEEARPVGDGVTDEEGNDGQAPYKKTRKNKFKKRISRRLRMLGDQVGTIEATLGGIEDTLKDIQRYLKKMPKGKFPHPSKYFGG
RGGPDEDGLSGERPDEDPKIGGGPSNMDEDRFFIPANLNTPSSDSPNESYDSSLSSTLSFHNPSTSQSHTLSSLKLHGTTSYPNGVKPAIS