; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS026299 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026299
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
Genome locationscaffold38:369272..372052
RNA-Seq ExpressionMS026299
SyntenyMS026299
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005743 - mitochondrial inner membrane (cellular component)
InterPro domainsIPR007523 - NDUFAF3/Mth938 domain-containing protein
IPR036748 - MTH938-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152792.1 LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Momordica charantia]1.8e-6794.48Show/hide
Query:  MAATATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAES
        MAATA QK VATLPNLIRSLRKDR RPGLSQPLPSLRRAFSLYDQINL     EDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAES
Subjt:  MAATATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAES

Query:  LSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
        LSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  LSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
XP_022964366.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita moschata]8.7e-6790.78Show/hide
Query:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF
        A QKAVATLPNLIRS+RKDR RPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNG+DYEGSLLCVG+LLMSWSP+KFSEIT ESLSIF
Subjt:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF

Query:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
        QI+RPIPEIL+LGCG+Y EPVNP+LRQFIRSTGMKLEAVD+
Subjt:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
XP_023513625.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita pepo subsp. pepo]3.9e-6791.49Show/hide
Query:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF
        A QKAVATLPNLIRS+RKDR RPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNG+DYEGSLLCVG+LLMSWSP+KFSEIT ESLSIF
Subjt:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF

Query:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
        QI+RPIPEIL+LGCG+Y EPVNPELRQFIRSTGMKLEAVD+
Subjt:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
XP_031743290.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus]8.7e-6790.07Show/hide
Query:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF
        A QKAVATLPNLIR+L+ DR +PG SQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVG+LLMSW+P+KFSEIT++SLSIF
Subjt:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF

Query:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
        QIVRPIPEIL+LGCG+YTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
XP_038906819.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benincasa hispida]9.3e-6994.33Show/hide
Query:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF
        A QKAVATLPNLIRSLR DR RPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVG+LLMSWSP+KFSEIT ESLSIF
Subjt:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF

Query:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
        QIVRPIPEIL+LGCG+YTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
TrEMBL top hitse value%identityAlignment
A0A1S3CB84 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 34.6e-6689.36Show/hide
Query:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF
        A QKAVATLP+LIR+L+ DR +PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVG+LLMSWSP+KFSEIT +SLSIF
Subjt:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF

Query:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
        QIVRPIPEIL+LGCG+YTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
A0A5A7TES8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 34.6e-6689.36Show/hide
Query:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF
        A QKAVATLP+LIR+L+ DR +PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVG+LLMSWSP+KFSEIT +SLSIF
Subjt:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF

Query:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
        QIVRPIPEIL+LGCG+YTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
A0A6J1DH82 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 38.5e-6894.48Show/hide
Query:  MAATATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAES
        MAATA QK VATLPNLIRSLRKDR RPGLSQPLPSLRRAFSLYDQINL     EDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAES
Subjt:  MAATATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAES

Query:  LSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
        LSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  LSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
A0A6J1HIQ3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 34.2e-6790.78Show/hide
Query:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF
        A QKAVATLPNLIRS+RKDR RPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNG+DYEGSLLCVG+LLMSWSP+KFSEIT ESLSIF
Subjt:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF

Query:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
        QI+RPIPEIL+LGCG+Y EPVNP+LRQFIRSTGMKLEAVD+
Subjt:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
A0A6J1KD25 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 31.2e-6690.78Show/hide
Query:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF
        A QKAVATLPNLIRS+RKDR RPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ YTETGFTVNG+DYEGSLLCVG LLMSWSP+KFSEIT ESLSIF
Subjt:  ATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIF

Query:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
        QI+RPIPEIL+LGCG+Y EPVNPELRQFIRSTGMKLEAVD+
Subjt:  QIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
SwissProt top hitse value%identityAlignment
A1L1F1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 35.6e-0832.14Show/hide
Query:  YTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
        Y+  GF +NG    G    +   ++ W+    S+I+ ESLS+F ++ P  E+L+LG G  TE ++ E+ + ++  G+ +E  DT
Subjt:  YTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
O08776 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 31.1e-0830.69Show/hide
Query:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVD
        +I+L+ N     +    Y   GFT+NG    G    +   ++ W+     +IT ES SIF ++ P  EI+++G G  TE ++ ++ Q +R  G+ +E  D
Subjt:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVD

Query:  T
        T
Subjt:  T
Q2HJI2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 37.3e-0828.71Show/hide
Query:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVD
        +I+L+       +    Y+  GF VNG    G    +   ++ W+   + +IT ES S+F ++ P  EI+++G G  TE + P + + +R  G+ +E  D
Subjt:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVD

Query:  T
        T
Subjt:  T
Q6DFN1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 33.9e-0931.4Show/hide
Query:  QRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
        + Y+  GF +NG    G    +   ++ W+   + +I  ESLS+F ++ P  EIL++G G   E ++P + +F+R  G+ +E  DT
Subjt:  QRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
Q9JKL4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 33.3e-0828.71Show/hide
Query:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVD
        +I+L+ +     +    Y+  GFT+ G    G  + +   ++ W+     +IT ES S+F ++ P  EI+++G G  TE ++P++ Q +R  G+ +E  D
Subjt:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVD

Query:  T
        T
Subjt:  T
Arabidopsis top hitse value%identityAlignment
AT2G44525.1 Protein of unknown function (DUF498/DUF598)2.0e-5373.38Show/hide
Query:  KAVATLPNLIRSLRKDRWRPGLSQP-LPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQI
        K++ATLP LI+S+RK+   P  S P LPSLRRAFSLYDQINLIDNVPEDQLRFQ + +T FTVNGV YEGSLLCVG+LLMSWSPRKFSEIT +SLSIFQ 
Subjt:  KAVATLPNLIRSLRKDRWRPGLSQP-LPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQI

Query:  VRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
        VRPIPE+L++GCG+   PV PE+RQF++S GMKLE VD+
Subjt:  VRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
AT3G60150.1 Protein of unknown function (DUF498/DUF598)6.9e-5471.94Show/hide
Query:  QKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQI
        QKA+ATLP LI+S+R +  +   S  LPSLRRAFSLYDQINLIDNVPEDQLRFQ + ET FTVNGV YEGSLLCVG+LLMSWSPR FS+IT +SLSIFQ 
Subjt:  QKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQI

Query:  VRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT
        VRPIPE+L++GCG+Y  P+NP++RQF++S GMKLE VD+
Subjt:  VRPIPEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGACGGCGACACAAAAAGCGGTGGCGACGCTGCCGAATCTCATCAGAAGCCTCAGAAAGGATCGCTGGAGGCCTGGACTCAGCCAGCCTCTGCCGTCGTTGAG
ACGCGCCTTTTCACTTTACGATCAGATCAATCTCATCGACAATGTCCCCGAAGATCAGCTTCGCTTTCAACGGTATACTGAGACGGGTTTTACGGTAAATGGAGTGGATT
ATGAAGGGAGCTTGCTCTGCGTTGGGAGCTTATTAATGTCGTGGAGTCCCAGGAAATTTTCGGAGATTACGGCGGAGAGTTTGTCTATCTTCCAGATTGTGCGGCCTATT
CCAGAAATTCTACTACTTGGCTGTGGGAAATATACTGAACCAGTAAATCCTGAATTAAGGCAATTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGGTACT
TATAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCGACGGCGACACAAAAAGCGGTGGCGACGCTGCCGAATCTCATCAGAAGCCTCAGAAAGGATCGCTGGAGGCCTGGACTCAGCCAGCCTCTGCCGTCGTTGAG
ACGCGCCTTTTCACTTTACGATCAGATCAATCTCATCGACAATGTCCCCGAAGATCAGCTTCGCTTTCAACGGTATACTGAGACGGGTTTTACGGTAAATGGAGTGGATT
ATGAAGGGAGCTTGCTCTGCGTTGGGAGCTTATTAATGTCGTGGAGTCCCAGGAAATTTTCGGAGATTACGGCGGAGAGTTTGTCTATCTTCCAGATTGTGCGGCCTATT
CCAGAAATTCTACTACTTGGCTGTGGGAAATATACTGAACCAGTAAATCCTGAATTAAGGCAATTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGGTACT
TATAGCTTGA
Protein sequenceShow/hide protein sequence
MAATATQKAVATLPNLIRSLRKDRWRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGSLLMSWSPRKFSEITAESLSIFQIVRPI
PEILLLGCGKYTEPVNPELRQFIRSTGMKLEAVDTVLIA