; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS026303 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026303
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold38:1075721..1076966
RNA-Seq ExpressionMS026303
SyntenyMS026303
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596879.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.7e-13778.93Show/hide
Query:  IIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEE----SCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTT
        +IINLR +RAYA+ F SLF     ++NLH NSNEE    SCS H P+RTHLVSPNN+ P+VH   TSDVVSLNK+I++ VRAGDLESAH+VFDKMPVRTT
Subjt:  IIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEE----SCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTT

Query:  VTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAM
        VTWNS+LSGY++V GKMKEAREVFDKIP+PDSVSYNIMLACYLRN GV  AL FFN MPVKDIASWNT+I+GFA+NGQ++EAF+LFSVMPEKNGVSWSAM
Subjt:  VTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAM

Query:  ISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLG
        IS YVE GDL++AEELY+ AFIKSVVVETAMLTGYMKFGKV+LAER+F +M VRNLVTWNSMIAGYVENCRAEDGLKLFKAMIE+R RPN SS+SSVLL 
Subjt:  ISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLG

Query:  CSNLSALPMGRQVHQLAS
        CSNLSALPMGRQVH + S
Subjt:  CSNLSALPMGRQVHQLAS

XP_022154015.1 pentatricopeptide repeat-containing protein At4g16835, mitochondrial-like [Momordica charantia]1.8e-17399.05Show/hide
Query:  MIIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEESCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTW
        MIIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEESCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTW
Subjt:  MIIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEESCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTW

Query:  NSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISV
        NSMLSGYSKVVGKMKEA EVFD+IPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISV
Subjt:  NSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISV

Query:  YVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSN
        YVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSN
Subjt:  YVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSN

Query:  LSALPMGRQVHQLAS
        LSALPMGRQVHQL S
Subjt:  LSALPMGRQVHQLAS

XP_022158469.1 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g16835, mitochondrial [Momordica charantia]3.6e-15087.3Show/hide
Query:  MIIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEESCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTW
        MIIINLRIARAYA+ F SLFLH VPV+NLH+NSNEES SGHP +RTHLVSPN+V PKV FAT SDVVSLNKTI+SLVRAGDL+SAH VFDKMPVRTTVTW
Subjt:  MIIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEESCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTW

Query:  NSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISV
        NS+LSGYSKV GKMKEAREVFDKIPQPDSV YNIMLACYLRN GVG AL FFNRMPVKDI SWNTMITGFA NGQVRE FELF VMPEKNG+SWSAMISV
Subjt:  NSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISV

Query:  YVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSN
        YVEQGDLDS EELYEKAFIKSVV E  MLTGY+KFG VDLAER+FHKM +RNLVTWNS+I GYVENCRAE GLKLFKAMIESRVRPNASSLSSVLLGCSN
Subjt:  YVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSN

Query:  LSALPMGRQVHQLAS
        LSALPMGRQVHQL S
Subjt:  LSALPMGRQVHQLAS

XP_022942378.1 pentatricopeptide repeat-containing protein At4g16835, mitochondrial isoform X1 [Cucurbita moschata]3.5e-13779.25Show/hide
Query:  IIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEE----SCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTT
        +IINLR +RAYA+   SLF     ++NLH NSNEE    SCS H P+RTHLVSPNN+ P+VH  TTSDVVSLNK+I++ VRAGDLESAH+VFDKMPVRTT
Subjt:  IIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEE----SCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTT

Query:  VTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAM
        VTWNS+LSGY+KV GKMKEAREVFDKIP+PDSVSYNIMLACYLRN GV  AL FFN MPVKDIASWNT+I+GFA++GQ++EAF+LFSVMPEKNGVSWSAM
Subjt:  VTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAM

Query:  ISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLG
        IS YVE GDL++AEELY+ AFIKSVVVETAMLTGYMKFGKV+LAER+F +M VRNLVTWNSMIAGYVENCRAEDGLKLFKAMIE+R RPN SS+SSVLL 
Subjt:  ISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLG

Query:  CSNLSALPMGRQVHQLAS
        CSNLSALPMGRQVH L S
Subjt:  CSNLSALPMGRQVHQLAS

XP_023005325.1 pentatricopeptide repeat-containing protein At4g16835, mitochondrial isoform X1 [Cucurbita maxima]9.2e-13878.26Show/hide
Query:  IIINLRIARAYAKNFLSLFLHFVP----VKNLHANSNEE----SCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMP
        +IINLR +RAYA+   SLF  F P    ++NLH NSNEE    SCS H P+RTHLVSPNN+ PKVH   TSDVVSLNK+I++ VRAGDLESAH+VFDKMP
Subjt:  IIINLRIARAYAKNFLSLFLHFVP----VKNLHANSNEE----SCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMP

Query:  VRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVS
        VRTTVTWNS+LSGY+KV GKMKEAREVFDKIP+PDSVSYNIMLACYLRN GV  AL FFN MPVKDIASWNT+I+GFA+NGQ+++AF+LFSVMPEKNGVS
Subjt:  VRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVS

Query:  WSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSS
        WSAMIS YVE GDL++AEELY+ AFIKSVVVETAMLTGYMKFGKV+LAER+F +M VRNLVTWNSMIAGYVENCR+ DGLKLFKAMIESR RPN+SS+SS
Subjt:  WSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSS

Query:  VLLGCSNLSALPMGRQVHQLAS
        VLL CSNLSALPMGRQVH + S
Subjt:  VLLGCSNLSALPMGRQVHQLAS

TrEMBL top hitse value%identityAlignment
A0A5D3CKW0 Pentatricopeptide repeat-containing protein3.0e-13476.23Show/hide
Query:  IIINLRIARAYAKNFLSLFLHFVPV----KNLHANSNEES----CSG--HPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDK
        +II+ R +RAYAK   SLF HF+P+    +NLH  SNEES    CS   HPP+R HLVSPNN+ PK+H  T SDVVSLNKTI+S VR  DLESA  VFDK
Subjt:  IIINLRIARAYAKNFLSLFLHFVPV----KNLHANSNEES----CSG--HPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDK

Query:  MPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNG
        M VRTTVTWN++LSGY+KV GK+KEA E+FDKIP+PDSVSYNIMLACYLRNYGV  AL FFNRMPVKDIASWNT+I+GFAQNGQ+++AF+LFSVMPEKNG
Subjt:  MPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNG

Query:  VSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSL
        VSWSAMIS +VE GDL++AEELY+K  +KSVVVETAMLTGYMKFGKV+LAER+F +M V+NLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPN  SL
Subjt:  VSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSL

Query:  SSVLLGCSNLSALPMGRQVHQLAS
        SSVLLGCSNLSALP+GRQ+HQL S
Subjt:  SSVLLGCSNLSALPMGRQVHQLAS

A0A6J1DMF8 pentatricopeptide repeat-containing protein At4g16835, mitochondrial-like8.6e-17499.05Show/hide
Query:  MIIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEESCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTW
        MIIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEESCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTW
Subjt:  MIIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEESCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTW

Query:  NSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISV
        NSMLSGYSKVVGKMKEA EVFD+IPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISV
Subjt:  NSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISV

Query:  YVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSN
        YVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSN
Subjt:  YVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSN

Query:  LSALPMGRQVHQLAS
        LSALPMGRQVHQL S
Subjt:  LSALPMGRQVHQLAS

A0A6J1DZH8 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g16835, mitochondrial1.7e-15087.3Show/hide
Query:  MIIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEESCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTW
        MIIINLRIARAYA+ F SLFLH VPV+NLH+NSNEES SGHP +RTHLVSPN+V PKV FAT SDVVSLNKTI+SLVRAGDL+SAH VFDKMPVRTTVTW
Subjt:  MIIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEESCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTW

Query:  NSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISV
        NS+LSGYSKV GKMKEAREVFDKIPQPDSV YNIMLACYLRN GVG AL FFNRMPVKDI SWNTMITGFA NGQVRE FELF VMPEKNG+SWSAMISV
Subjt:  NSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISV

Query:  YVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSN
        YVEQGDLDS EELYEKAFIKSVV E  MLTGY+KFG VDLAER+FHKM +RNLVTWNS+I GYVENCRAE GLKLFKAMIESRVRPNASSLSSVLLGCSN
Subjt:  YVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSN

Query:  LSALPMGRQVHQLAS
        LSALPMGRQVHQL S
Subjt:  LSALPMGRQVHQLAS

A0A6J1FUN8 pentatricopeptide repeat-containing protein At4g16835, mitochondrial isoform X11.7e-13779.25Show/hide
Query:  IIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEE----SCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTT
        +IINLR +RAYA+   SLF     ++NLH NSNEE    SCS H P+RTHLVSPNN+ P+VH  TTSDVVSLNK+I++ VRAGDLESAH+VFDKMPVRTT
Subjt:  IIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEE----SCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTT

Query:  VTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAM
        VTWNS+LSGY+KV GKMKEAREVFDKIP+PDSVSYNIMLACYLRN GV  AL FFN MPVKDIASWNT+I+GFA++GQ++EAF+LFSVMPEKNGVSWSAM
Subjt:  VTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAM

Query:  ISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLG
        IS YVE GDL++AEELY+ AFIKSVVVETAMLTGYMKFGKV+LAER+F +M VRNLVTWNSMIAGYVENCRAEDGLKLFKAMIE+R RPN SS+SSVLL 
Subjt:  ISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLG

Query:  CSNLSALPMGRQVHQLAS
        CSNLSALPMGRQVH L S
Subjt:  CSNLSALPMGRQVHQLAS

A0A6J1KX44 pentatricopeptide repeat-containing protein At4g16835, mitochondrial isoform X14.5e-13878.26Show/hide
Query:  IIINLRIARAYAKNFLSLFLHFVP----VKNLHANSNEE----SCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMP
        +IINLR +RAYA+   SLF  F P    ++NLH NSNEE    SCS H P+RTHLVSPNN+ PKVH   TSDVVSLNK+I++ VRAGDLESAH+VFDKMP
Subjt:  IIINLRIARAYAKNFLSLFLHFVP----VKNLHANSNEE----SCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMP

Query:  VRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVS
        VRTTVTWNS+LSGY+KV GKMKEAREVFDKIP+PDSVSYNIMLACYLRN GV  AL FFN MPVKDIASWNT+I+GFA+NGQ+++AF+LFSVMPEKNGVS
Subjt:  VRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVS

Query:  WSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSS
        WSAMIS YVE GDL++AEELY+ AFIKSVVVETAMLTGYMKFGKV+LAER+F +M VRNLVTWNSMIAGYVENCR+ DGLKLFKAMIESR RPN+SS+SS
Subjt:  WSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSS

Query:  VLLGCSNLSALPMGRQVHQLAS
        VLL CSNLSALPMGRQVH + S
Subjt:  VLLGCSNLSALPMGRQVHQLAS

SwissProt top hitse value%identityAlignment
O64766 Pentatricopeptide repeat-containing protein At2g35030, mitochondrial2.7e-4736.51Show/hide
Query:  DVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWN
        +VV+    +S  +R+  L  A  +F +MP R  V+WN+M+ GY++  G++ +A E+FD++P+ + VS+N M+   ++   +  A+  F RMP +D+ SW 
Subjt:  DVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWN

Query:  TMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYV
         M+ G A+NG+V EA  LF  MPE+N +SW+AMI+ Y +   +D A++L++    +       M+TG+++  +++ A  LF +M  +N+++W +MI GYV
Subjt:  TMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYV

Query:  ENCRAEDGLKLFKAMI-ESRVRPNASSLSSVLLGCSNLSALPMGRQVHQLAS
        EN   E+ L +F  M+ +  V+PN  +  S+L  CS+L+ L  G+Q+HQL S
Subjt:  ENCRAEDGLKLFKAMI-ESRVRPNASSLSSVLLGCSNLSALPMGRQVHQLAS

Q56XI1 Pentatricopeptide repeat-containing protein At1g09410, mitochondrial1.0e-3832.01Show/hide
Query:  DVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKD-----
        +++S N  +S  ++ G+++ A +VFD MP R  V+W +++ GY    GK+  A  +F K+P+ + VS+ +ML  +L++  +  A   +  +P KD     
Subjt:  DVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKD-----

Query:  --------------------------IASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYM
                                  + +W TM+TG+ QN +V +A ++F VMPEK  VSW++M+  YV+ G ++ AEEL+E   +K V+   AM++G  
Subjt:  --------------------------IASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYM

Query:  KFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSNLSALPMGRQVH
        + G++  A R+F  M  RN  +W ++I  +  N    + L LF  M +  VRP   +L S+L  C++L++L  G+QVH
Subjt:  KFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSNLSALPMGRQVH

Q9FXB9 Pentatricopeptide repeat-containing protein At1g56690, mitochondrial1.2e-3938.3Show/hide
Query:  TSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIAS
        TS  V+ +  IS L R G +  A + FD +  +   +WNS++SGY    G  KEAR++FD++ + + VS+N +++ Y++N  +  A   F  MP +++ S
Subjt:  TSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIAS

Query:  WNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAG
        W  M+ G+ Q G V EA  LF  MPE+N VSW+ M    ++ G +D A +LY+   +K VV  T M+ G  + G+VD A  +F +M  RN+VTW +MI G
Subjt:  WNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAG

Query:  YVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLG
        Y +N R +   KLF+ M E        S +S+LLG
Subjt:  YVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLG

Q9M4P3 Pentatricopeptide repeat-containing protein At4g16835, mitochondrial1.3e-7852.8Show/hide
Query:  NEESCSGHPP---QRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSV
        +  SCS   P   +  +L  P++            +  LNK I+  VR+GD++ A  VF  M  + T+TWNS+L G SK   +M EA ++FD+IP+PD+ 
Subjt:  NEESCSGHPP---QRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSV

Query:  SYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLT
        SYNIML+CY+RN     A +FF+RMP KD ASWNTMITG+A+ G++ +A ELF  M EKN VSW+AMIS Y+E GDL+ A   ++ A ++ VV  TAM+T
Subjt:  SYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLT

Query:  GYMKFGKVDLAERLFHKMGV-RNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSNLSALPMGRQVHQLAS
        GYMK  KV+LAE +F  M V +NLVTWN+MI+GYVEN R EDGLKLF+AM+E  +RPN+S LSS LLGCS LSAL +GRQ+HQ+ S
Subjt:  GYMKFGKVDLAERLFHKMGV-RNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSNLSALPMGRQVHQLAS

Q9SY02 Pentatricopeptide repeat-containing protein At4g027502.0e-4235.02Show/hide
Query:  DVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSK------------------------VVG------KMKEAREVFDKIPQPDSVSYNI
        DV S N  +S   + G ++ A  VFD+MP +  V+WN++LS Y +                        ++G      K+ EAR+ FD +   D VS+N 
Subjt:  DVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSK------------------------VVG------KMKEAREVFDKIPQPDSVSYNI

Query:  MLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMK
        ++  Y ++  +  A   F+  PV+D+ +W  M++G+ QN  V EA ELF  MPE+N VSW+AM++ YV+   ++ A+EL++    ++V     M+TGY +
Subjt:  MLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMK

Query:  FGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSNLSALPMGRQVH
         GK+  A+ LF KM  R+ V+W +MIAGY ++  + + L+LF  M     R N SS SS L  C+++ AL +G+Q+H
Subjt:  FGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSNLSALPMGRQVH

Arabidopsis top hitse value%identityAlignment
AT1G09410.1 pentatricopeptide (PPR) repeat-containing protein7.2e-4032.01Show/hide
Query:  DVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKD-----
        +++S N  +S  ++ G+++ A +VFD MP R  V+W +++ GY    GK+  A  +F K+P+ + VS+ +ML  +L++  +  A   +  +P KD     
Subjt:  DVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKD-----

Query:  --------------------------IASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYM
                                  + +W TM+TG+ QN +V +A ++F VMPEK  VSW++M+  YV+ G ++ AEEL+E   +K V+   AM++G  
Subjt:  --------------------------IASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYM

Query:  KFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSNLSALPMGRQVH
        + G++  A R+F  M  RN  +W ++I  +  N    + L LF  M +  VRP   +L S+L  C++L++L  G+QVH
Subjt:  KFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSNLSALPMGRQVH

AT1G56690.1 Pentatricopeptide repeat (PPR) superfamily protein8.5e-4138.3Show/hide
Query:  TSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIAS
        TS  V+ +  IS L R G +  A + FD +  +   +WNS++SGY    G  KEAR++FD++ + + VS+N +++ Y++N  +  A   F  MP +++ S
Subjt:  TSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIAS

Query:  WNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAG
        W  M+ G+ Q G V EA  LF  MPE+N VSW+ M    ++ G +D A +LY+   +K VV  T M+ G  + G+VD A  +F +M  RN+VTW +MI G
Subjt:  WNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAG

Query:  YVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLG
        Y +N R +   KLF+ M E        S +S+LLG
Subjt:  YVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLG

AT2G35030.1 Pentatricopeptide repeat (PPR) superfamily protein1.9e-4836.51Show/hide
Query:  DVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWN
        +VV+    +S  +R+  L  A  +F +MP R  V+WN+M+ GY++  G++ +A E+FD++P+ + VS+N M+   ++   +  A+  F RMP +D+ SW 
Subjt:  DVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWN

Query:  TMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYV
         M+ G A+NG+V EA  LF  MPE+N +SW+AMI+ Y +   +D A++L++    +       M+TG+++  +++ A  LF +M  +N+++W +MI GYV
Subjt:  TMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYV

Query:  ENCRAEDGLKLFKAMI-ESRVRPNASSLSSVLLGCSNLSALPMGRQVHQLAS
        EN   E+ L +F  M+ +  V+PN  +  S+L  CS+L+ L  G+Q+HQL S
Subjt:  ENCRAEDGLKLFKAMI-ESRVRPNASSLSSVLLGCSNLSALPMGRQVHQLAS

AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.4e-4335.02Show/hide
Query:  DVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSK------------------------VVG------KMKEAREVFDKIPQPDSVSYNI
        DV S N  +S   + G ++ A  VFD+MP +  V+WN++LS Y +                        ++G      K+ EAR+ FD +   D VS+N 
Subjt:  DVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSK------------------------VVG------KMKEAREVFDKIPQPDSVSYNI

Query:  MLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMK
        ++  Y ++  +  A   F+  PV+D+ +W  M++G+ QN  V EA ELF  MPE+N VSW+AM++ YV+   ++ A+EL++    ++V     M+TGY +
Subjt:  MLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLTGYMK

Query:  FGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSNLSALPMGRQVH
         GK+  A+ LF KM  R+ V+W +MIAGY ++  + + L+LF  M     R N SS SS L  C+++ AL +G+Q+H
Subjt:  FGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSNLSALPMGRQVH

AT4G16835.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.3e-8052.8Show/hide
Query:  NEESCSGHPP---QRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSV
        +  SCS   P   +  +L  P++            +  LNK I+  VR+GD++ A  VF  M  + T+TWNS+L G SK   +M EA ++FD+IP+PD+ 
Subjt:  NEESCSGHPP---QRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKVVGKMKEAREVFDKIPQPDSV

Query:  SYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLT
        SYNIML+CY+RN     A +FF+RMP KD ASWNTMITG+A+ G++ +A ELF  M EKN VSW+AMIS Y+E GDL+ A   ++ A ++ VV  TAM+T
Subjt:  SYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIKSVVVETAMLT

Query:  GYMKFGKVDLAERLFHKMGV-RNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSNLSALPMGRQVHQLAS
        GYMK  KV+LAE +F  M V +NLVTWN+MI+GYVEN R EDGLKLF+AM+E  +RPN+S LSS LLGCS LSAL +GRQ+HQ+ S
Subjt:  GYMKFGKVDLAERLFHKMGV-RNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSNLSALPMGRQVHQLAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATCATCAATCTTAGAATCGCGAGGGCCTACGCCAAAAATTTCCTATCTTTATTCCTCCATTTTGTTCCTGTCAAGAACCTCCATGCCAATTCAAATGAAGAATC
ATGTTCCGGCCACCCACCGCAAAGAACACATTTGGTTTCCCCCAATAACGTGAACCCAAAAGTTCATTTTGCCACCACTTCTGATGTTGTTTCGTTGAATAAAACAATCA
GTAGTTTAGTAAGAGCTGGGGATTTAGAGTCCGCCCACGAGGTGTTCGACAAAATGCCTGTTAGAACCACGGTTACTTGGAATTCTATGTTGTCGGGATACTCGAAGGTG
GTTGGAAAAATGAAGGAAGCCCGTGAAGTGTTTGATAAAATTCCTCAACCAGATTCCGTGTCTTATAACATTATGTTGGCTTGTTATTTAAGAAACTATGGTGTTGGGGT
TGCTTTGACTTTCTTTAACAGGATGCCTGTCAAGGATATTGCGTCTTGGAACACGATGATCACGGGATTTGCCCAGAATGGACAAGTGCGAGAGGCGTTTGAATTGTTTT
CAGTGATGCCGGAGAAGAACGGCGTCTCATGGAGCGCTATGATTTCTGTGTACGTGGAGCAAGGAGATTTGGATTCAGCCGAGGAGTTGTATGAGAAAGCGTTTATAAAG
AGTGTGGTTGTGGAGACTGCAATGCTTACTGGGTACATGAAGTTTGGGAAGGTGGACTTAGCTGAAAGGTTATTTCATAAGATGGGTGTGAGGAATTTGGTCACGTGGAA
CTCTATGATAGCAGGGTATGTCGAGAATTGTCGCGCTGAGGATGGTCTGAAGCTCTTCAAGGCAATGATTGAATCTCGGGTGAGGCCGAATGCTTCGAGTTTGAGCAGTG
TCCTTCTTGGTTGTAGCAACTTGTCTGCTTTGCCTATGGGTAGGCAAGTGCATCAACTGGCCTCGTCGATCTCGGCGTTCAGTATTTCCAATCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCATCATCAATCTTAGAATCGCGAGGGCCTACGCCAAAAATTTCCTATCTTTATTCCTCCATTTTGTTCCTGTCAAGAACCTCCATGCCAATTCAAATGAAGAATC
ATGTTCCGGCCACCCACCGCAAAGAACACATTTGGTTTCCCCCAATAACGTGAACCCAAAAGTTCATTTTGCCACCACTTCTGATGTTGTTTCGTTGAATAAAACAATCA
GTAGTTTAGTAAGAGCTGGGGATTTAGAGTCCGCCCACGAGGTGTTCGACAAAATGCCTGTTAGAACCACGGTTACTTGGAATTCTATGTTGTCGGGATACTCGAAGGTG
GTTGGAAAAATGAAGGAAGCCCGTGAAGTGTTTGATAAAATTCCTCAACCAGATTCCGTGTCTTATAACATTATGTTGGCTTGTTATTTAAGAAACTATGGTGTTGGGGT
TGCTTTGACTTTCTTTAACAGGATGCCTGTCAAGGATATTGCGTCTTGGAACACGATGATCACGGGATTTGCCCAGAATGGACAAGTGCGAGAGGCGTTTGAATTGTTTT
CAGTGATGCCGGAGAAGAACGGCGTCTCATGGAGCGCTATGATTTCTGTGTACGTGGAGCAAGGAGATTTGGATTCAGCCGAGGAGTTGTATGAGAAAGCGTTTATAAAG
AGTGTGGTTGTGGAGACTGCAATGCTTACTGGGTACATGAAGTTTGGGAAGGTGGACTTAGCTGAAAGGTTATTTCATAAGATGGGTGTGAGGAATTTGGTCACGTGGAA
CTCTATGATAGCAGGGTATGTCGAGAATTGTCGCGCTGAGGATGGTCTGAAGCTCTTCAAGGCAATGATTGAATCTCGGGTGAGGCCGAATGCTTCGAGTTTGAGCAGTG
TCCTTCTTGGTTGTAGCAACTTGTCTGCTTTGCCTATGGGTAGGCAAGTGCATCAACTGGCCTCGTCGATCTCGGCGTTCAGTATTTCCAATCTATGA
Protein sequenceShow/hide protein sequence
MIIINLRIARAYAKNFLSLFLHFVPVKNLHANSNEESCSGHPPQRTHLVSPNNVNPKVHFATTSDVVSLNKTISSLVRAGDLESAHEVFDKMPVRTTVTWNSMLSGYSKV
VGKMKEAREVFDKIPQPDSVSYNIMLACYLRNYGVGVALTFFNRMPVKDIASWNTMITGFAQNGQVREAFELFSVMPEKNGVSWSAMISVYVEQGDLDSAEELYEKAFIK
SVVVETAMLTGYMKFGKVDLAERLFHKMGVRNLVTWNSMIAGYVENCRAEDGLKLFKAMIESRVRPNASSLSSVLLGCSNLSALPMGRQVHQLASSISAFSISNL