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MS026308 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026308
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Genome locationscaffold344:37872..38294
RNA-Seq ExpressionMS026308
SyntenyMS026308
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV90605.1 hypothetical protein CFOL_v3_34014 [Cephalotus follicularis]1.1e-0742.86Show/hide
Query:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSASFAVLPITHRDGRLDSSSTSAISSNWGFDSA
        FA    S HCG  TIG P ++ SS EFH  C+TK P+    RIS+C HH TI P   S    +N+    S +V   T R G+L S    AISS W   + 
Subjt:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSASFAVLPITHRDGRLDSSSTSAISSNWGFDSA

Query:  MMLSK
         ML K
Subjt:  MMLSK

RYR16957.1 hypothetical protein Ahy_B03g061784 [Arachis hypogaea]1.3e-1650.45Show/hide
Query:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSAS----FAVLPITHRDGRLDSSSTSAISSNWG
        FA V  S HCGN TIG P   +S  EF   C+TKHP    D+ STCEHH TIFP AS+S+LQLN+SSS+S    F+   ITH++G L+S+   AISS   
Subjt:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSAS----FAVLPITHRDGRLDSSSTSAISSNWG

Query:  FDSAMMLSKMT
        F +   L   T
Subjt:  FDSAMMLSKMT

RYR23552.1 hypothetical protein Ahy_B03g068754 [Arachis hypogaea]7.2e-1548.67Show/hide
Query:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSAS------FAVLPITHRDGRLDSSSTSAISSN
        FA V  S HCGN TIG P   +S  EF   C+TKHP    D+ STCEHH TIFP AS+S+LQLN+SSS+S      F    ITH++G   S++  AISS 
Subjt:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSAS------FAVLPITHRDGRLDSSSTSAISSN

Query:  WGFDSAMMLSKMT
          F +   L   T
Subjt:  WGFDSAMMLSKMT

RYR23553.1 hypothetical protein Ahy_B03g068755 [Arachis hypogaea]6.6e-1648.7Show/hide
Query:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSAS--------FAVLPITHRDGRLDSSSTSAIS
        FA V  S HCGN TIG P   +S  EF   C+TKHP    D+ STCEHH TIFP AS+S+LQLN+SSS+S        F    ITH++G L+S++  AIS
Subjt:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSAS--------FAVLPITHRDGRLDSSSTSAIS

Query:  SNWGFDSAMMLSKMT
        S   F +   L   T
Subjt:  SNWGFDSAMMLSKMT

RZS14066.1 hypothetical protein BHM03_00045722, partial [Ensete ventricosum]4.3e-0752.83Show/hide
Query:  ALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFP
        ALV  S HCG  T+G PH  +S+ EF   C+TKHP  G D   TCEHH T  P
Subjt:  ALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFP

TrEMBL top hitse value%identityAlignment
A0A1Q3DDV3 Uncharacterized protein5.4e-0842.86Show/hide
Query:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSASFAVLPITHRDGRLDSSSTSAISSNWGFDSA
        FA    S HCG  TIG P ++ SS EFH  C+TK P+    RIS+C HH TI P   S    +N+    S +V   T R G+L S    AISS W   + 
Subjt:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSASFAVLPITHRDGRLDSSSTSAISSNWGFDSA

Query:  MMLSK
         ML K
Subjt:  MMLSK

A0A444ZRZ5 Uncharacterized protein6.4e-1750.45Show/hide
Query:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSAS----FAVLPITHRDGRLDSSSTSAISSNWG
        FA V  S HCGN TIG P   +S  EF   C+TKHP    D+ STCEHH TIFP AS+S+LQLN+SSS+S    F+   ITH++G L+S+   AISS   
Subjt:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSAS----FAVLPITHRDGRLDSSSTSAISSNWG

Query:  FDSAMMLSKMT
        F +   L   T
Subjt:  FDSAMMLSKMT

A0A445AAQ9 Uncharacterized protein3.2e-1648.7Show/hide
Query:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSAS--------FAVLPITHRDGRLDSSSTSAIS
        FA V  S HCGN TIG P   +S  EF   C+TKHP    D+ STCEHH TIFP AS+S+LQLN+SSS+S        F    ITH++G L+S++  AIS
Subjt:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSAS--------FAVLPITHRDGRLDSSSTSAIS

Query:  SNWGFDSAMMLSKMT
        S   F +   L   T
Subjt:  SNWGFDSAMMLSKMT

A0A445AB88 Uncharacterized protein3.5e-1548.67Show/hide
Query:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSAS------FAVLPITHRDGRLDSSSTSAISSN
        FA V  S HCGN TIG P   +S  EF   C+TKHP    D+ STCEHH TIFP AS+S+LQLN+SSS+S      F    ITH++G   S++  AISS 
Subjt:  FALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSAS------FAVLPITHRDGRLDSSSTSAISSN

Query:  WGFDSAMMLSKMT
          F +   L   T
Subjt:  WGFDSAMMLSKMT

T1N767 Uncharacterized protein4.6e-0739.81Show/hide
Query:  ALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIF-PCASSSTLQLNASSSASFAVLP----------ITHRDGRLDSSSTSA
        A VP S +CG  T+G P  T+SS EFH  C+TKHP  G +      HH T   P ASSS +  +A + +     P           THR+G LD    SA
Subjt:  ALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIF-PCASSSTLQLNASSSASFAVLP----------ITHRDGRLDSSSTSA

Query:  ISS
        IS+
Subjt:  ISS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATTCGCATTGGTCCCCTCATCCATCCACTGCGGAAACACCACCATTGGCGACCCACACGTAACGATCTCGAGCGACGAATTCCACCTACATTGCATCACGAAACA
CCCTGTTGTCGGATTGGACAGAATCTCCACCTGCGAGCACCACGACACTATCTTCCCATGTGCCTCCAGCTCAACTCTGCAACTCAACGCCTCGTCCTCAGCCTCATTCG
CGGTTCTCCCCATCACCCATAGAGATGGGCGCCTCGACTCCAGCAGCACTTCGGCGATTTCCTCCAATTGGGGCTTCGACAGCGCCATGATGCTCTCGAAAATGACACGT
ACACCATCGACGACTTTGGCTTCGAGCTCAGCCACGCCATGTGGGATTTCGTCAAAGAATCTGAGGAAATCTCGCGTTGAACCACCAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATATTCGCATTGGTCCCCTCATCCATCCACTGCGGAAACACCACCATTGGCGACCCACACGTAACGATCTCGAGCGACGAATTCCACCTACATTGCATCACGAAACA
CCCTGTTGTCGGATTGGACAGAATCTCCACCTGCGAGCACCACGACACTATCTTCCCATGTGCCTCCAGCTCAACTCTGCAACTCAACGCCTCGTCCTCAGCCTCATTCG
CGGTTCTCCCCATCACCCATAGAGATGGGCGCCTCGACTCCAGCAGCACTTCGGCGATTTCCTCCAATTGGGGCTTCGACAGCGCCATGATGCTCTCGAAAATGACACGT
ACACCATCGACGACTTTGGCTTCGAGCTCAGCCACGCCATGTGGGATTTCGTCAAAGAATCTGAGGAAATCTCGCGTTGAACCACCAGCTTGA
Protein sequenceShow/hide protein sequence
MIFALVPSSIHCGNTTIGDPHVTISSDEFHLHCITKHPVVGLDRISTCEHHDTIFPCASSSTLQLNASSSASFAVLPITHRDGRLDSSSTSAISSNWGFDSAMMLSKMTR
TPSTTLASSSATPCGISSKNLRKSRVEPPA