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MS026313 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026313
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description(-)-germacrene D synthase-like
Genome locationscaffold344:196476..196808
RNA-Seq ExpressionMS026313
SyntenyMS026313
Gene Ontology termsGO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0000287 - magnesium ion binding (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144020.1 (-)-germacrene D synthase-like [Momordica charantia]1.1e-1079.55Show/hide
Query:  EEGGYRGAANLEEAVKKAIIAAWSPEVAGVRGWRSYGLLASPDV
        EEGGY GAANLEEAV+KA+  AWSPEVAGVRGWRSY  LASP++
Subjt:  EEGGYRGAANLEEAVKKAIIAAWSPEVAGVRGWRSYGLLASPDV
TrEMBL top hitse value%identityAlignment
A0A6J1CQG9 (-)-germacrene D synthase-like5.4e-1179.55Show/hide
Query:  EEGGYRGAANLEEAVKKAIIAAWSPEVAGVRGWRSYGLLASPDV
        EEGGY GAANLEEAV+KA+  AWSPEVAGVRGWRSY  LASP++
Subjt:  EEGGYRGAANLEEAVKKAIIAAWSPEVAGVRGWRSYGLLASPDV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTTAATATAAAAAAGTTCTTTTCCAACGGATTTGTTTACTCACTTAAAGCACACCATGAGGAAGGAGGTTACCGTGGTGCAGCGAACTTGGAAGAAGCTGTGAA
GAAGGCTATTATTGCTGCGTGGTCGCCGGAGGTCGCTGGAGTTCGTGGTTGGAGGTCTTACGGTTTGCTTGCATCGCCTGATGTAGTCGTGGGTATGAAGGAGAAAAGGT
GGTGGTGGTGGGATATGAAAGGAGAAGAGATGGAGTGGTGGTTATGGAGGAAAAAGACAATCTTAGAGAGGGAGAGAAGAAGAAAAGATGAGGGGTTTGTAGTGAGTATT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCTTAATATAAAAAAGTTCTTTTCCAACGGATTTGTTTACTCACTTAAAGCACACCATGAGGAAGGAGGTTACCGTGGTGCAGCGAACTTGGAAGAAGCTGTGAA
GAAGGCTATTATTGCTGCGTGGTCGCCGGAGGTCGCTGGAGTTCGTGGTTGGAGGTCTTACGGTTTGCTTGCATCGCCTGATGTAGTCGTGGGTATGAAGGAGAAAAGGT
GGTGGTGGTGGGATATGAAAGGAGAAGAGATGGAGTGGTGGTTATGGAGGAAAAAGACAATCTTAGAGAGGGAGAGAAGAAGAAAAGATGAGGGGTTTGTAGTGAGTATT
TAA
Protein sequenceShow/hide protein sequence
MFLNIKKFFSNGFVYSLKAHHEEGGYRGAANLEEAVKKAIIAAWSPEVAGVRGWRSYGLLASPDVVVGMKEKRWWWWDMKGEEMEWWLWRKKTILERERRRKDEGFVVSI