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MS026351 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026351
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionankyrin repeat-containing protein ITN1-like
Genome locationscaffold459:525367..526725
RNA-Seq ExpressionMS026351
SyntenyMS026351
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153557.1 ankyrin repeat-containing protein At2g01680-like [Momordica charantia]2.2e-3671.3Show/hide
Query:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL
        M   FTSATWL LPQ+++T+WLPNVIL +VGG+M T FIY G+ELVKH MRKLK RR R +KPIV    N DDNSDH+STDDLSS+K KS IE+RDL+KL
Subjt:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL

Query:  YSFSTNSDVASSRGL
        YS STNSDVASSRG+
Subjt:  YSFSTNSDVASSRGL

XP_022153566.1 ankyrin repeat-containing protein At2g01680-like [Momordica charantia]3.8e-4177.19Show/hide
Query:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL
        MAT FTSATWLILPQ+Y+T+W+PNVIL VVGG+MGT FI+ GVELV+HWMRKLK RR R +KPIV   GN D NSDHQSTDDLSS+K KS IE++DL+KL
Subjt:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL

Query:  YSFSTNSDVASSRG
        YSFSTNSDVASSRG
Subjt:  YSFSTNSDVASSRG

XP_022153567.1 ankyrin repeat-containing protein ITN1-like [Momordica charantia]2.0e-4279.82Show/hide
Query:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL
        MA  FTSATWL LPQ+Y+T+WLPNVIL VVGG+MGT FIY GVELVKHWMRKLK RR R +KP +SAS NFD NSDHQSTDD SS K KS+IEQRDL+KL
Subjt:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL

Query:  YSFSTNSDVASSRG
        YSFSTNSDVASSRG
Subjt:  YSFSTNSDVASSRG

XP_022153605.1 ankyrin repeat-containing protein At2g01680-like [Momordica charantia]2.2e-3675Show/hide
Query:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDD-NSDHQSTDDLSSTKVKSNIEQRDLKK
        MAT FTSATWL LPQ+Y+T+WLP  IL VVGG+MGT FIY GVELVKHWMRKLK RR R  KP V    N  D NSDHQSTDDLSS K  S+IE+RDL+K
Subjt:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDD-NSDHQSTDDLSSTKVKSNIEQRDLKK

Query:  LYSFSTNSDVASSRGL
        LYSFSTNSDVASSRGL
Subjt:  LYSFSTNSDVASSRGL

XP_022153623.1 ankyrin repeat-containing protein ITN1-like [Momordica charantia]4.0e-3877.19Show/hide
Query:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL
        MAT FTSATWLILPQ+YRTHWLPNVIL VVGG MG  FIY GVELVKHWMRKLK RR R  KPIV  S     NSDHQSTDDLSS K + +IE+RDL +L
Subjt:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL

Query:  YSFSTNSDVASSRG
        YSFSTNSDVASSRG
Subjt:  YSFSTNSDVASSRG

TrEMBL top hitse value%identityAlignment
A0A6J1DH91 ankyrin repeat-containing protein At2g01680-like1.1e-3675Show/hide
Query:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDD-NSDHQSTDDLSSTKVKSNIEQRDLKK
        MAT FTSATWL LPQ+Y+T+WLP  IL VVGG+MGT FIY GVELVKHWMRKLK RR R  KP V    N  D NSDHQSTDDLSS K  S+IE+RDL+K
Subjt:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDD-NSDHQSTDDLSSTKVKSNIEQRDLKK

Query:  LYSFSTNSDVASSRGL
        LYSFSTNSDVASSRGL
Subjt:  LYSFSTNSDVASSRGL

A0A6J1DHZ0 ankyrin repeat-containing protein ITN1-like1.9e-3877.19Show/hide
Query:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL
        MAT FTSATWLILPQ+YRTHWLPNVIL VVGG MG  FIY GVELVKHWMRKLK RR R  KPIV  S     NSDHQSTDDLSS K + +IE+RDL +L
Subjt:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL

Query:  YSFSTNSDVASSRG
        YSFSTNSDVASSRG
Subjt:  YSFSTNSDVASSRG

A0A6J1DJA0 ankyrin repeat-containing protein ITN1-like9.8e-4379.82Show/hide
Query:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL
        MA  FTSATWL LPQ+Y+T+WLPNVIL VVGG+MGT FIY GVELVKHWMRKLK RR R +KP +SAS NFD NSDHQSTDD SS K KS+IEQRDL+KL
Subjt:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL

Query:  YSFSTNSDVASSRG
        YSFSTNSDVASSRG
Subjt:  YSFSTNSDVASSRG

A0A6J1DL07 ankyrin repeat-containing protein At2g01680-like1.9e-4177.19Show/hide
Query:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL
        MAT FTSATWLILPQ+Y+T+W+PNVIL VVGG+MGT FI+ GVELV+HWMRKLK RR R +KPIV   GN D NSDHQSTDDLSS+K KS IE++DL+KL
Subjt:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL

Query:  YSFSTNSDVASSRG
        YSFSTNSDVASSRG
Subjt:  YSFSTNSDVASSRG

A0A6J1DL48 ankyrin repeat-containing protein NPR4-like1.1e-3670.18Show/hide
Query:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL
        M TTFTSATWL LPQ+Y+T+WLPN IL VVGG++GT FIY G+ELV HW RK+K R+ R  KPIV    N DDN DHQSTDDLSS K KSNIEQRDL + 
Subjt:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL

Query:  YSFSTNSDVASSRG
        +S STNSD ASSRG
Subjt:  YSFSTNSDVASSRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10340.1 Ankyrin repeat family protein1.0e-0739.62Show/hide
Query:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKL
        MAT + +A+W+ +P  + T WL   I+ V GG++   F Y GVE + HW +K+
Subjt:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKL

AT1G10340.2 Ankyrin repeat family protein1.0e-0739.62Show/hide
Query:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKL
        MAT + +A+W+ +P  + T WL   I+ V GG++   F Y GVE + HW +K+
Subjt:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKL

AT2G24600.1 Ankyrin repeat family protein1.7e-0735.09Show/hide
Query:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL
        MAT + +A+ + +P    T WL  VI++V GGS+   F Y GVE + HW +K+  R GRG  PI     N          +D+ +   K+  E   L + 
Subjt:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL

Query:  YSFSTNSDVASSRG
            TNSD+A+S G
Subjt:  YSFSTNSDVASSRG

AT2G24600.2 Ankyrin repeat family protein1.7e-0735.09Show/hide
Query:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL
        MAT + +A+ + +P    T WL  VI++V GGS+   F Y GVE + HW +K+  R GRG  PI     N          +D+ +   K+  E   L + 
Subjt:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL

Query:  YSFSTNSDVASSRG
            TNSD+A+S G
Subjt:  YSFSTNSDVASSRG

AT2G24600.3 Ankyrin repeat family protein1.7e-0735.09Show/hide
Query:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL
        MAT + +A+ + +P    T WL  VI++V GGS+   F Y GVE + HW +K+  R GRG  PI     N          +D+ +   K+  E   L + 
Subjt:  MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKL

Query:  YSFSTNSDVASSRG
            TNSD+A+S G
Subjt:  YSFSTNSDVASSRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACAACTTTCACGTCAGCCACATGGCTCATCTTGCCGCAAGAGTATAGGACACATTGGCTTCCAAATGTGATACTGACGGTGGTGGGAGGGAGCATGGGAACACC
ATTCATTTATTTTGGAGTAGAATTGGTAAAGCATTGGATGAGGAAGCTCAAGTTGAGAAGAGGGAGAGGCGATAAGCCAATTGTTTCGGCTAGCGGTAATTTCGACGACA
ATTCTGACCATCAATCCACGGATGATCTATCATCTACCAAAGTTAAGTCAAATATAGAGCAACGTGATCTAAAGAAGCTCTATTCATTTTCTACTAATTCTGATGTTGCA
AGCTCCAGAGGTCTTGAGAGAGTCGATCGAGAGAGGAGTCCACCGTCCCCCGCTACCATGGCCACCGTCGCCGTGAACCCGCTGCCGTCCCCGTCGTGTGGATGCCGTCG
ATCTCGGGGTGGAATCATCCATCTCCGACGTGCTGCCGCCGTTAGATTGTCCTTGTCAAGGCATTCCAACGTCTCTCGCCAGTATTCTGACGAGAAGATATACGTTGAAG
AGTTTCAGCTGAAGGCTCAAGAAGGGAGGGATCGGCTCCATGTGGATGGAGATGAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGACAACTTTCACGTCAGCCACATGGCTCATCTTGCCGCAAGAGTATAGGACACATTGGCTTCCAAATGTGATACTGACGGTGGTGGGAGGGAGCATGGGAACACC
ATTCATTTATTTTGGAGTAGAATTGGTAAAGCATTGGATGAGGAAGCTCAAGTTGAGAAGAGGGAGAGGCGATAAGCCAATTGTTTCGGCTAGCGGTAATTTCGACGACA
ATTCTGACCATCAATCCACGGATGATCTATCATCTACCAAAGTTAAGTCAAATATAGAGCAACGTGATCTAAAGAAGCTCTATTCATTTTCTACTAATTCTGATGTTGCA
AGCTCCAGAGGTCTTGAGAGAGTCGATCGAGAGAGGAGTCCACCGTCCCCCGCTACCATGGCCACCGTCGCCGTGAACCCGCTGCCGTCCCCGTCGTGTGGATGCCGTCG
ATCTCGGGGTGGAATCATCCATCTCCGACGTGCTGCCGCCGTTAGATTGTCCTTGTCAAGGCATTCCAACGTCTCTCGCCAGTATTCTGACGAGAAGATATACGTTGAAG
AGTTTCAGCTGAAGGCTCAAGAAGGGAGGGATCGGCTCCATGTGGATGGAGATGAGTTTTAG
Protein sequenceShow/hide protein sequence
MATTFTSATWLILPQEYRTHWLPNVILTVVGGSMGTPFIYFGVELVKHWMRKLKLRRGRGDKPIVSASGNFDDNSDHQSTDDLSSTKVKSNIEQRDLKKLYSFSTNSDVA
SSRGLERVDRERSPPSPATMATVAVNPLPSPSCGCRRSRGGIIHLRRAAAVRLSLSRHSNVSRQYSDEKIYVEEFQLKAQEGRDRLHVDGDEF