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MS026357 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026357
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionankyrin repeat-containing protein NPR4-like
Genome locationscaffold459:585381..585800
RNA-Seq ExpressionMS026357
SyntenyMS026357
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002110 - Ankyrin repeat
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153557.1 ankyrin repeat-containing protein At2g01680-like [Momordica charantia]2.2e-4088.42Show/hide
Query:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP
        MD RLFQAVKWNDRRRFRNLVDENWEI+KQ SEETG+TALH AVRHG V+FV EILRLWPEAAAVENLKNETPF++AC+EGSEPEILMLLLEMEP
Subjt:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP

XP_022153566.1 ankyrin repeat-containing protein At2g01680-like [Momordica charantia]3.5e-3885.26Show/hide
Query:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP
        MD RLFQAV WNDR+RF NLVDEN EI+K+ISEETGDT LH A RHG V+FV +ILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP
Subjt:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP

XP_022153567.1 ankyrin repeat-containing protein ITN1-like [Momordica charantia]2.0e-2570.65Show/hide
Query:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE
        MD RLFQAV  N +RRF  LV +N+EI+KQISEETG+TALH AVRHG V  V EIL LWPEAA VENLK ETPF EACREG E +IL +LL+
Subjt:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE

XP_022153606.1 ankyrin repeat-containing protein NPR4-like [Momordica charantia]1.3e-4597.89Show/hide
Query:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP
        MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVEN KNETPFQEACREGSEPEILMLLL MEP
Subjt:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP

XP_022153656.1 ankyrin repeat-containing protein At5g02620-like [Momordica charantia]2.5e-2876.09Show/hide
Query:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE
        MD RLFQAV WN  R F  LV EN EI+KQ S+ TGDTALH AVRHGHV FV EILR+WPEAAAVENLK ETPF EACREG E +ILMLLLE
Subjt:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE

TrEMBL top hitse value%identityAlignment
A0A6J1DH91 ankyrin repeat-containing protein At2g01680-like9.8e-2668.42Show/hide
Query:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP
        MD RLF+AV+W D R F N+V +N EI+KQ SE TGDTALH AVR+G    V +IL+LWPEAAA ENLK ETPF EAC+EG E EILMLLLEM P
Subjt:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP

A0A6J1DJ89 ankyrin repeat-containing protein At2g01680-like1.1e-4088.42Show/hide
Query:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP
        MD RLFQAVKWNDRRRFRNLVDENWEI+KQ SEETG+TALH AVRHG V+FV EILRLWPEAAAVENLKNETPF++AC+EGSEPEILMLLLEMEP
Subjt:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP

A0A6J1DL07 ankyrin repeat-containing protein At2g01680-like1.7e-3885.26Show/hide
Query:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP
        MD RLFQAV WNDR+RF NLVDEN EI+K+ISEETGDT LH A RHG V+FV +ILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP
Subjt:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP

A0A6J1DL48 ankyrin repeat-containing protein NPR4-like6.5e-4697.89Show/hide
Query:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP
        MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVEN KNETPFQEACREGSEPEILMLLL MEP
Subjt:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEP

A0A6J1DLC6 ankyrin repeat-containing protein At5g02620-like1.2e-2876.09Show/hide
Query:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE
        MD RLFQAV WN  R F  LV EN EI+KQ S+ TGDTALH AVRHGHV FV EILR+WPEAAAVENLK ETPF EACREG E +ILMLLLE
Subjt:  MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10340.1 Ankyrin repeat family protein2.2e-0632Show/hide
Query:  LFQAVKWNDRRRFRNLVDENWEIMKQISEE--TGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE--MEPCTTRN
        +F A+  ND   F  LV+++   +++ +EE    +T LH A + GH   V++I+ L P   +  N    TP   A   G +  I+M +LE  +E C+ RN
Subjt:  LFQAVKWNDRRRFRNLVDENWEIMKQISEE--TGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE--MEPCTTRN

AT1G10340.2 Ankyrin repeat family protein2.2e-0632Show/hide
Query:  LFQAVKWNDRRRFRNLVDENWEIMKQISEE--TGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE--MEPCTTRN
        +F A+  ND   F  LV+++   +++ +EE    +T LH A + GH   V++I+ L P   +  N    TP   A   G +  I+M +LE  +E C+ RN
Subjt:  LFQAVKWNDRRRFRNLVDENWEIMKQISEE--TGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE--MEPCTTRN

AT2G24600.1 Ankyrin repeat family protein1.1e-0529.27Show/hide
Query:  LFQAVKWNDRRRFRNLVDENWEIMKQISEE--TGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE--MEPCTTRN
        +F A+  ND   F  LV+     +++ SEE  T +T LH A + GH   V +I+ L P   +  N   +TP   A   G +  I+M +L+  +E  + RN
Subjt:  LFQAVKWNDRRRFRNLVDENWEIMKQISEE--TGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE--MEPCTTRN

Query:  S--------VYRDVFLESQKSFV
        +         +  +F+E+ K  V
Subjt:  S--------VYRDVFLESQKSFV

AT2G24600.2 Ankyrin repeat family protein1.1e-0529.27Show/hide
Query:  LFQAVKWNDRRRFRNLVDENWEIMKQISEE--TGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE--MEPCTTRN
        +F A+  ND   F  LV+     +++ SEE  T +T LH A + GH   V +I+ L P   +  N   +TP   A   G +  I+M +L+  +E  + RN
Subjt:  LFQAVKWNDRRRFRNLVDENWEIMKQISEE--TGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE--MEPCTTRN

Query:  S--------VYRDVFLESQKSFV
        +         +  +F+E+ K  V
Subjt:  S--------VYRDVFLESQKSFV

AT2G24600.3 Ankyrin repeat family protein1.1e-0529.27Show/hide
Query:  LFQAVKWNDRRRFRNLVDENWEIMKQISEE--TGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE--MEPCTTRN
        +F A+  ND   F  LV+     +++ SEE  T +T LH A + GH   V +I+ L P   +  N   +TP   A   G +  I+M +L+  +E  + RN
Subjt:  LFQAVKWNDRRRFRNLVDENWEIMKQISEE--TGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLE--MEPCTTRN

Query:  S--------VYRDVFLESQKSFV
        +         +  +F+E+ K  V
Subjt:  S--------VYRDVFLESQKSFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACAAGGCTTTTCCAGGCAGTGAAATGGAACGACAGAAGGCGTTTCAGGAATCTGGTGGACGAAAATTGGGAAATTATGAAGCAGATATCAGAAGAGACGGGGGA
CACGGCGCTGCACTCGGCGGTGAGGCACGGCCATGTCAACTTTGTGACGGAGATCCTGAGGCTGTGGCCGGAAGCTGCGGCGGTGGAGAATCTGAAGAATGAGACTCCAT
TCCAAGAAGCTTGTAGGGAAGGATCGGAACCCGAAATCTTAATGCTGCTTCTGGAGATGGAGCCATGCACTACTAGAAATTCGGTCTACCGTGACGTTTTTTTGGAGTCA
CAAAAATCTTTCGTGACGTTTTTATTGGCGTCACGTATACGCCCATCACAAAAGGTATACGAGACGTTTAAAAAACGTCACCAAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATACAAGGCTTTTCCAGGCAGTGAAATGGAACGACAGAAGGCGTTTCAGGAATCTGGTGGACGAAAATTGGGAAATTATGAAGCAGATATCAGAAGAGACGGGGGA
CACGGCGCTGCACTCGGCGGTGAGGCACGGCCATGTCAACTTTGTGACGGAGATCCTGAGGCTGTGGCCGGAAGCTGCGGCGGTGGAGAATCTGAAGAATGAGACTCCAT
TCCAAGAAGCTTGTAGGGAAGGATCGGAACCCGAAATCTTAATGCTGCTTCTGGAGATGGAGCCATGCACTACTAGAAATTCGGTCTACCGTGACGTTTTTTTGGAGTCA
CAAAAATCTTTCGTGACGTTTTTATTGGCGTCACGTATACGCCCATCACAAAAGGTATACGAGACGTTTAAAAAACGTCACCAAAATTAG
Protein sequenceShow/hide protein sequence
MDTRLFQAVKWNDRRRFRNLVDENWEIMKQISEETGDTALHSAVRHGHVNFVTEILRLWPEAAAVENLKNETPFQEACREGSEPEILMLLLEMEPCTTRNSVYRDVFLES
QKSFVTFLLASRIRPSQKVYETFKKRHQN