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MS026359 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026359
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionankyrin repeat-containing protein At5g02620-like
Genome locationscaffold459:632669..632980
RNA-Seq ExpressionMS026359
SyntenyMS026359
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR020683 - Ankyrin repeat-containing domain
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153557.1 ankyrin repeat-containing protein At2g01680-like [Momordica charantia]1.0e-2666.67Show/hide
Query:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVG-EGEILSVLLE-TVWGSS
        MDPR+ Q V WN  R  F+ LV EN EILKQRSEETG+TA HLAVRHGRV+FVKEILR+WPE+AAVENLK ETP  +AC+ G E EIL +LLE   W  S
Subjt:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVG-EGEILSVLLE-TVWGSS

Query:  KLTSR
        +L+ R
Subjt:  KLTSR

XP_022153566.1 ankyrin repeat-containing protein At2g01680-like [Momordica charantia]8.8e-2666.02Show/hide
Query:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVG-EGEILSVLLE-TVWGSS
        MDPR+ Q VTWN +R  F  LV EN EILK+ SEETGDT  HLA RHGRV+FVK+ILR+WPE+AAVENLK ETP  EACR G E EIL +LLE   W  S
Subjt:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVG-EGEILSVLLE-TVWGSS

Query:  KLT
        +L+
Subjt:  KLT

XP_022153567.1 ankyrin repeat-containing protein ITN1-like [Momordica charantia]5.9e-3068.93Show/hide
Query:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLETVWGSSKL
        MDPR+ Q VT NQ+R  F KLV +N EI+KQ SEETG+TA HLAVRHGRVE VKEIL +WPE+A VENLK+ETP HEACR GE +IL VLL++ WGSS+L
Subjt:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLETVWGSSKL

Query:  TSR
          R
Subjt:  TSR

XP_022153622.1 ankyrin repeat-containing protein ITN1-like [Momordica charantia]2.2e-2976.6Show/hide
Query:  MDPRVLQMVTWNQERYCFKKLVGENA-EILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLET
        MDPRV + VT N+E+  FKKLVG++  +I++QRSEETGDTA HLAVRHGRVEFVKEILR+WPESAAVENLK+ETP HEACR GEGEIL +LLET
Subjt:  MDPRVLQMVTWNQERYCFKKLVGENA-EILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLET

XP_022153656.1 ankyrin repeat-containing protein At5g02620-like [Momordica charantia]8.8e-3480.65Show/hide
Query:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLET
        MDPR+ Q VTWNQER CF KLVGENAEILKQRS+ TGDTA HLAVRHG V+FVKEILRVWPE+AAVENLK+ETP HEACR GE +IL +LLET
Subjt:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLET

TrEMBL top hitse value%identityAlignment
A0A6J1DJ89 ankyrin repeat-containing protein At2g01680-like5.0e-2766.67Show/hide
Query:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVG-EGEILSVLLE-TVWGSS
        MDPR+ Q V WN  R  F+ LV EN EILKQRSEETG+TA HLAVRHGRV+FVKEILR+WPE+AAVENLK ETP  +AC+ G E EIL +LLE   W  S
Subjt:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVG-EGEILSVLLE-TVWGSS

Query:  KLTSR
        +L+ R
Subjt:  KLTSR

A0A6J1DJA0 ankyrin repeat-containing protein ITN1-like2.8e-3068.93Show/hide
Query:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLETVWGSSKL
        MDPR+ Q VT NQ+R  F KLV +N EI+KQ SEETG+TA HLAVRHGRVE VKEIL +WPE+A VENLK+ETP HEACR GE +IL VLL++ WGSS+L
Subjt:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLETVWGSSKL

Query:  TSR
          R
Subjt:  TSR

A0A6J1DJF7 ankyrin repeat-containing protein ITN1-like1.1e-2976.6Show/hide
Query:  MDPRVLQMVTWNQERYCFKKLVGENA-EILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLET
        MDPRV + VT N+E+  FKKLVG++  +I++QRSEETGDTA HLAVRHGRVEFVKEILR+WPESAAVENLK+ETP HEACR GEGEIL +LLET
Subjt:  MDPRVLQMVTWNQERYCFKKLVGENA-EILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLET

A0A6J1DL07 ankyrin repeat-containing protein At2g01680-like4.2e-2666.02Show/hide
Query:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVG-EGEILSVLLE-TVWGSS
        MDPR+ Q VTWN +R  F  LV EN EILK+ SEETGDT  HLA RHGRV+FVK+ILR+WPE+AAVENLK ETP  EACR G E EIL +LLE   W  S
Subjt:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVG-EGEILSVLLE-TVWGSS

Query:  KLT
        +L+
Subjt:  KLT

A0A6J1DLC6 ankyrin repeat-containing protein At5g02620-like4.2e-3480.65Show/hide
Query:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLET
        MDPR+ Q VTWNQER CF KLVGENAEILKQRS+ TGDTA HLAVRHG V+FVKEILRVWPE+AAVENLK+ETP HEACR GE +IL +LLET
Subjt:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLET

SwissProt top hitse value%identityAlignment
Q01484 Ankyrin-29.8e-0444.83Show/hide
Query:  GDTAQHLAVRHGRVEFVKEILRVWPESAAVE--NLKEETPLHEACRVGEGEILSVLLE
        G+TA H+A R G+VE V+ +LR     A V+    +E+TPLH A R+G+ EI+ +LL+
Subjt:  GDTAQHLAVRHGRVEFVKEILRVWPESAAVE--NLKEETPLHEACRVGEGEILSVLLE

Q8C8R3 Ankyrin-29.8e-0444.83Show/hide
Query:  GDTAQHLAVRHGRVEFVKEILRVWPESAAVE--NLKEETPLHEACRVGEGEILSVLLE
        G+TA H+A R G+VE V+ +LR     A V+    +E+TPLH A R+G+ EI+ +LL+
Subjt:  GDTAQHLAVRHGRVEFVKEILRVWPESAAVE--NLKEETPLHEACRVGEGEILSVLLE

Q8LPS2 Protein ACCELERATED CELL DEATH 63.0e-0532.53Show/hide
Query:  NQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLETV
        N E+ C +KL   N   +++    TGD+  H+A + G +E VKEI+   P     +N   +TPLH A   G  +++  L+ +V
Subjt:  NQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLETV

Arabidopsis top hitse value%identityAlignment
AT4G14390.1 Ankyrin repeat family protein1.3e-0632.65Show/hide
Query:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLETVWGSS
        M P V   ++ +  + C +KL      + + +S  TGD+  HLAV  G +E VKEI+   P     +N   +TPLH A   G   I+   +  V  SS
Subjt:  MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLETVWGSS

AT4G14400.1 ankyrin repeat family protein2.2e-0632.53Show/hide
Query:  NQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLETV
        N E+ C +KL   N   +++    TGD+  H+A + G +E VKEI+   P     +N   +TPLH A   G  +++  L+ +V
Subjt:  NQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLETV

AT4G14400.2 ankyrin repeat family protein2.2e-0632.53Show/hide
Query:  NQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLETV
        N E+ C +KL   N   +++    TGD+  H+A + G +E VKEI+   P     +N   +TPLH A   G  +++  L+ +V
Subjt:  NQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLETV

AT4G14400.3 ankyrin repeat family protein2.2e-0632.53Show/hide
Query:  NQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLETV
        N E+ C +KL   N   +++    TGD+  H+A + G +E VKEI+   P     +N   +TPLH A   G  +++  L+ +V
Subjt:  NQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLETV

AT5G50140.1 Ankyrin repeat family protein3.9e-0841.54Show/hide
Query:  LKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLET
        L+++ E  G T  HLAV+ G  E VK+I+ + P   +  N K +TPLH A R+G   IL ++LE+
Subjt:  LKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAAGGGTTTTGCAGATGGTGACATGGAACCAGGAAAGGTACTGTTTCAAGAAGTTGGTGGGCGAGAATGCTGAAATTCTGAAGCAGAGGTCAGAAGAGACGGG
CGACACGGCGCAGCACTTGGCGGTGAGGCACGGCCGCGTGGAGTTTGTGAAGGAGATCCTGAGGGTGTGGCCGGAATCTGCGGCGGTGGAGAATCTGAAGGAGGAGACTC
CATTACACGAAGCCTGTAGGGTAGGAGAAGGCGAAATCTTGAGTGTTCTGCTGGAGACGGTATGGGGCAGTTCAAAACTCACCAGCCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCAAGGGTTTTGCAGATGGTGACATGGAACCAGGAAAGGTACTGTTTCAAGAAGTTGGTGGGCGAGAATGCTGAAATTCTGAAGCAGAGGTCAGAAGAGACGGG
CGACACGGCGCAGCACTTGGCGGTGAGGCACGGCCGCGTGGAGTTTGTGAAGGAGATCCTGAGGGTGTGGCCGGAATCTGCGGCGGTGGAGAATCTGAAGGAGGAGACTC
CATTACACGAAGCCTGTAGGGTAGGAGAAGGCGAAATCTTGAGTGTTCTGCTGGAGACGGTATGGGGCAGTTCAAAACTCACCAGCCGTTAA
Protein sequenceShow/hide protein sequence
MDPRVLQMVTWNQERYCFKKLVGENAEILKQRSEETGDTAQHLAVRHGRVEFVKEILRVWPESAAVENLKEETPLHEACRVGEGEILSVLLETVWGSSKLTSR