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MS026386 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026386
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncystatin-1-like
Genome locationscaffold402:9098..9502
RNA-Seq ExpressionMS026386
SyntenyMS026386
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142678.1 cystatin-1-like [Momordica charantia]3.7e-0834.38Show/hide
Query:  LLLGSLLVLLVAAEATIDSVITLGEKKPVGGSDYKRIDVTEPRIHELVRLTVAIHNWQKGSELQLEGVSCGRSETVLNGVDYNFCLFAGNKAGTEGGMFT
        L L SLL+L+VAA    + +   G  KPV        D+++P+   L ++TV IHNWQ GS LQ   + CG S  ++ G++Y FCL   +K         
Subjt:  LLLGSLLVLLVAAEATIDSVITLGEKKPVGGSDYKRIDVTEPRIHELVRLTVAIHNWQKGSELQLEGVSCGRSETVLNGVDYNFCLFAGNKAGTEGGMFT

Query:  ALVFVDAATNNIRVNSFFQ---DIDCCF
         +      + NI +N F     D++CCF
Subjt:  ALVFVDAATNNIRVNSFFQ---DIDCCF
TrEMBL top hitse value%identityAlignment
A0A6J1CNV2 cystatin-1-like1.8e-0834.38Show/hide
Query:  LLLGSLLVLLVAAEATIDSVITLGEKKPVGGSDYKRIDVTEPRIHELVRLTVAIHNWQKGSELQLEGVSCGRSETVLNGVDYNFCLFAGNKAGTEGGMFT
        L L SLL+L+VAA    + +   G  KPV        D+++P+   L ++TV IHNWQ GS LQ   + CG S  ++ G++Y FCL   +K         
Subjt:  LLLGSLLVLLVAAEATIDSVITLGEKKPVGGSDYKRIDVTEPRIHELVRLTVAIHNWQKGSELQLEGVSCGRSETVLNGVDYNFCLFAGNKAGTEGGMFT

Query:  ALVFVDAATNNIRVNSFFQ---DIDCCF
         +      + NI +N F     D++CCF
Subjt:  ALVFVDAATNNIRVNSFFQ---DIDCCF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGTCGTGTGTGTTCTTGCTGCTGGGATCTCTTCTGGTGCTGCTGGTGGCGGCCGAGGCAACAATTGACAGTGTGATAACTTTGGGCGAAAAGAAACCAGTTGG
TGGGAGTGACTATAAACGAATAGACGTAACTGAGCCAAGAATCCACGAGCTGGTGCGGCTTACGGTGGCGATACACAATTGGCAAAAGGGGTCGGAGCTGCAGCTGGAGG
GAGTGTCGTGTGGAAGGTCCGAAACCGTGCTGAACGGAGTCGACTACAACTTTTGCTTATTCGCCGGTAACAAGGCTGGAACTGAAGGGGGCATGTTCACCGCCCTCGTC
TTCGTCGACGCCGCAACCAACAACATTCGTGTCAACAGCTTCTTCCAAGACATTGACTGTTGCTTTGGCTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGTCGTGTGTGTTCTTGCTGCTGGGATCTCTTCTGGTGCTGCTGGTGGCGGCCGAGGCAACAATTGACAGTGTGATAACTTTGGGCGAAAAGAAACCAGTTGG
TGGGAGTGACTATAAACGAATAGACGTAACTGAGCCAAGAATCCACGAGCTGGTGCGGCTTACGGTGGCGATACACAATTGGCAAAAGGGGTCGGAGCTGCAGCTGGAGG
GAGTGTCGTGTGGAAGGTCCGAAACCGTGCTGAACGGAGTCGACTACAACTTTTGCTTATTCGCCGGTAACAAGGCTGGAACTGAAGGGGGCATGTTCACCGCCCTCGTC
TTCGTCGACGCCGCAACCAACAACATTCGTGTCAACAGCTTCTTCCAAGACATTGACTGTTGCTTTGGCTACTGA
Protein sequenceShow/hide protein sequence
MAKSCVFLLLGSLLVLLVAAEATIDSVITLGEKKPVGGSDYKRIDVTEPRIHELVRLTVAIHNWQKGSELQLEGVSCGRSETVLNGVDYNFCLFAGNKAGTEGGMFTALV
FVDAATNNIRVNSFFQDIDCCFGY