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MS026387 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026387
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncystatin-1-like
Genome locationscaffold402:35192..35599
RNA-Seq ExpressionMS026387
SyntenyMS026387
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142678.1 cystatin-1-like [Momordica charantia]5.2e-1846.81Show/hide
Query:  MGKSVLWLACVVVVVAAAGLASGEEEQLVKIGEVEPIDISDPSYQELGERVVEKINDQQTGSHLQFLKLMCGWHSDIGFSSSYKLCLKVIDNDNDNAVVY
        MGKSVLWLA ++++V A   ASG EEQL + G ++P+DISDP YQ L +  VE I++ Q GS+LQFL+L+CGW S I    +Y+ CL++ID DN+NAV +
Subjt:  MGKSVLWLACVVVVVAAAGLASGEEEQLVKIGEVEPIDISDPSYQELGERVVEKINDQQTGSHLQFLKLMCGWHSDIGFSSSYKLCLKVIDNDNDNAVVY

Query:  YEAFA----NANLHFMSVTGFH--PINLIHCCSSPQAKAIA
        Y+       +AN+    +  FH  PI+L  C +    KA A
Subjt:  YEAFA----NANLHFMSVTGFH--PINLIHCCSSPQAKAIA
TrEMBL top hitse value%identityAlignment
A0A6J1CNV2 cystatin-1-like2.5e-1846.81Show/hide
Query:  MGKSVLWLACVVVVVAAAGLASGEEEQLVKIGEVEPIDISDPSYQELGERVVEKINDQQTGSHLQFLKLMCGWHSDIGFSSSYKLCLKVIDNDNDNAVVY
        MGKSVLWLA ++++V A   ASG EEQL + G ++P+DISDP YQ L +  VE I++ Q GS+LQFL+L+CGW S I    +Y+ CL++ID DN+NAV +
Subjt:  MGKSVLWLACVVVVVAAAGLASGEEEQLVKIGEVEPIDISDPSYQELGERVVEKINDQQTGSHLQFLKLMCGWHSDIGFSSSYKLCLKVIDNDNDNAVVY

Query:  YEAFA----NANLHFMSVTGFH--PINLIHCCSSPQAKAIA
        Y+       +AN+    +  FH  PI+L  C +    KA A
Subjt:  YEAFA----NANLHFMSVTGFH--PINLIHCCSSPQAKAIA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGTCTGTTTTGTGGTTGGCTTGTGTTGTCGTGGTGGTGGCGGCGGCAGGTTTGGCAAGTGGAGAAGAAGAGCAATTAGTTAAGATCGGCGAGGTTGAACCAAT
AGACATAAGTGACCCATCGTACCAAGAGCTGGGGGAACGGGTAGTGGAGAAGATTAACGATCAGCAAACTGGGTCTCATCTGCAGTTCCTGAAACTGATGTGTGGATGGC
ACAGCGATATAGGTTTCTCGAGCAGTTATAAGTTGTGTTTGAAGGTCATTGATAATGACAATGATAATGCAGTGGTTTACTATGAAGCCTTCGCCAACGCAAACCTCCAT
TTCATGAGCGTCACTGGCTTCCACCCCATCAATCTCATCCACTGTTGCAGCTCTCCCCAAGCAAAAGCAATAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGTCTGTTTTGTGGTTGGCTTGTGTTGTCGTGGTGGTGGCGGCGGCAGGTTTGGCAAGTGGAGAAGAAGAGCAATTAGTTAAGATCGGCGAGGTTGAACCAAT
AGACATAAGTGACCCATCGTACCAAGAGCTGGGGGAACGGGTAGTGGAGAAGATTAACGATCAGCAAACTGGGTCTCATCTGCAGTTCCTGAAACTGATGTGTGGATGGC
ACAGCGATATAGGTTTCTCGAGCAGTTATAAGTTGTGTTTGAAGGTCATTGATAATGACAATGATAATGCAGTGGTTTACTATGAAGCCTTCGCCAACGCAAACCTCCAT
TTCATGAGCGTCACTGGCTTCCACCCCATCAATCTCATCCACTGTTGCAGCTCTCCCCAAGCAAAAGCAATAGCTTAG
Protein sequenceShow/hide protein sequence
MGKSVLWLACVVVVVAAAGLASGEEEQLVKIGEVEPIDISDPSYQELGERVVEKINDQQTGSHLQFLKLMCGWHSDIGFSSSYKLCLKVIDNDNDNAVVYYEAFANANLH
FMSVTGFHPINLIHCCSSPQAKAIA