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MS026388 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026388
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncystatin-1-like
Genome locationscaffold402:46695..47102
RNA-Seq ExpressionMS026388
SyntenyMS026388
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142678.1 cystatin-1-like [Momordica charantia]1.3e-2149.61Show/hide
Query:  MGKSVLWLGCVLLVVVAAGGLGSGAEEQLSKPHGFDPIDVSDPYYQMLGKLVVEKMNNQESGSSHLQFLEVMCGWHKAILR-NYDLCLKVIDKDNNNAVV
        MGKSVLWL  +LL+VVAA    SG EEQLS+P G  P+D+SDP YQ L K+ VE ++N + G S+LQFLE++CGW + +   NY  CL++IDKDNNNAV 
Subjt:  MGKSVLWLGCVLLVVVAAGGLGSGAEEQLSKPHGFDPIDVSDPYYQMLGKLVVEKMNNQESGSSHLQFLEVMCGWHKAILR-NYDLCLKVIDKDNNNAVV

Query:  TY--EAFVHEEIRFISVTAHPVPRLINCC
         Y  +  +           H VP  + CC
Subjt:  TY--EAFVHEEIRFISVTAHPVPRLINCC
TrEMBL top hitse value%identityAlignment
A0A6J1CNV2 cystatin-1-like6.4e-2249.61Show/hide
Query:  MGKSVLWLGCVLLVVVAAGGLGSGAEEQLSKPHGFDPIDVSDPYYQMLGKLVVEKMNNQESGSSHLQFLEVMCGWHKAILR-NYDLCLKVIDKDNNNAVV
        MGKSVLWL  +LL+VVAA    SG EEQLS+P G  P+D+SDP YQ L K+ VE ++N + G S+LQFLE++CGW + +   NY  CL++IDKDNNNAV 
Subjt:  MGKSVLWLGCVLLVVVAAGGLGSGAEEQLSKPHGFDPIDVSDPYYQMLGKLVVEKMNNQESGSSHLQFLEVMCGWHKAILR-NYDLCLKVIDKDNNNAVV

Query:  TY--EAFVHEEIRFISVTAHPVPRLINCC
         Y  +  +           H VP  + CC
Subjt:  TY--EAFVHEEIRFISVTAHPVPRLINCC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGTCAGTTTTGTGGTTGGGTTGTGTTCTCCTGGTGGTGGTGGCGGCGGGAGGTTTGGGAAGTGGTGCAGAAGAGCAATTATCTAAGCCCCACGGGTTCGATCC
AATAGACGTAAGTGACCCATATTACCAAATGCTGGGGAAATTGGTAGTGGAGAAGATGAACAATCAGGAAAGTGGGTCGTCTCATCTGCAGTTCCTGGAAGTGATGTGTG
GATGGCACAAAGCTATATTGAGGAATTATGATTTGTGTTTGAAGGTGATTGATAAGGACAATAATAATGCAGTGGTTACCTACGAAGCCTTCGTCCACGAAGAAATCCGT
TTCATAAGCGTCACTGCCCACCCCGTCCCCCGTCTCATCAACTGTTGCAGCCCTCCCGAAGCAAAAGCAATAGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGTCAGTTTTGTGGTTGGGTTGTGTTCTCCTGGTGGTGGTGGCGGCGGGAGGTTTGGGAAGTGGTGCAGAAGAGCAATTATCTAAGCCCCACGGGTTCGATCC
AATAGACGTAAGTGACCCATATTACCAAATGCTGGGGAAATTGGTAGTGGAGAAGATGAACAATCAGGAAAGTGGGTCGTCTCATCTGCAGTTCCTGGAAGTGATGTGTG
GATGGCACAAAGCTATATTGAGGAATTATGATTTGTGTTTGAAGGTGATTGATAAGGACAATAATAATGCAGTGGTTACCTACGAAGCCTTCGTCCACGAAGAAATCCGT
TTCATAAGCGTCACTGCCCACCCCGTCCCCCGTCTCATCAACTGTTGCAGCCCTCCCGAAGCAAAAGCAATAGCCTAG
Protein sequenceShow/hide protein sequence
MGKSVLWLGCVLLVVVAAGGLGSGAEEQLSKPHGFDPIDVSDPYYQMLGKLVVEKMNNQESGSSHLQFLEVMCGWHKAILRNYDLCLKVIDKDNNNAVVTYEAFVHEEIR
FISVTAHPVPRLINCCSPPEAKAIA