; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS026390 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026390
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold402:80298..80714
RNA-Seq ExpressionMS026390
SyntenyMS026390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RYR04437.1 hypothetical protein Ahy_B06g084164 [Arachis hypogaea]1.9e-0734.31Show/hide
Query:  VVHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPR--RFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKE
        +V H     SDH P+    L++  G E + R  RP   RFE  W Q  ECK++I K WS   E      + KL+ C  +L +W K    G L   I  K+
Subjt:  VVHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPR--RFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKE

Query:  VEIRDL-TLDRSDSWRYNLWKAENELNKLLEENKQNW
          I  L TL +S+S    L + + EL+ LL + +  W
Subjt:  VEIRDL-TLDRSDSWRYNLWKAENELNKLLEENKQNW

RYR06732.1 hypothetical protein Ahy_B05g074030 [Arachis hypogaea]1.9e-0734.31Show/hide
Query:  VVHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPR--RFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKE
        +V H     SDH P+    L++  G E + R  RP   RFE  W Q  ECK++I K WS   E      + KL+ C  +L +W K    G L   I  K+
Subjt:  VVHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPR--RFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKE

Query:  VEIRDL-TLDRSDSWRYNLWKAENELNKLLEENKQNW
          I  L TL +S+S    L + + EL+ LL + +  W
Subjt:  VEIRDL-TLDRSDSWRYNLWKAENELNKLLEENKQNW

TXG57064.1 hypothetical protein EZV62_018377 [Acer yangbiense]9.4e-0734.91Show/hide
Query:  VHHFDFLASDHRPILTSWLVEGDGSEGESR-GQRPRRFENSWYQMGECKKIIQKVWSNRGEI--NMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKE
        V H  + +SDHRP+L S+    DG +G  +  ++P +FE+ W +  EC K+I++ W N  E+  ++   +RKL  C  +L  W+ ++  GSLR  I  K+
Subjt:  VHHFDFLASDHRPILTSWLVEGDGSEGESR-GQRPRRFENSWYQMGECKKIIQKVWSNRGEI--NMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKE

Query:  VEIRDL
         E+ +L
Subjt:  VEIRDL

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]9.0e-3451.13Show/hide
Query:  VHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI
        + H +FLASDHRPIL  WL  G+ + G  +G+RP RFE  W+   ECK+I+++VW+ +G++    FQ K+ +CL EL KWN  RL GSLRGAI RKEVEI
Subjt:  VHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI

Query:  RDLTLDRSDSWRYNLWKAENELNKLLEENKQNW
        + +  D +  WR NLW+A+ +L KLLEE +  W
Subjt:  RDLTLDRSDSWRYNLWKAENELNKLLEENKQNW

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.2e-1445.45Show/hide
Query:  VHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI
        V H + L+SDHRPIL SW  E   +      QR  RFE SW Q+  C+ II   W +   I +  FQ K+ +CL+ L +WNK RLN SL+GAIA KE E+
Subjt:  VHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI

Query:  RDLTLDRSDS
          L     DS
Subjt:  RDLTLDRSDS

TrEMBL top hitse value%identityAlignment
A0A444YR87 Reverse transcriptase domain-containing protein9.1e-0834.31Show/hide
Query:  VVHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPR--RFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKE
        +V H     SDH P+    L++  G E + R  RP   RFE  W Q  ECK++I K WS   E      + KL+ C  +L +W K    G L   I  K+
Subjt:  VVHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPR--RFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKE

Query:  VEIRDL-TLDRSDSWRYNLWKAENELNKLLEENKQNW
          I  L TL +S+S    L + + EL+ LL + +  W
Subjt:  VEIRDL-TLDRSDSWRYNLWKAENELNKLLEENKQNW

A0A444YXR6 Uncharacterized protein9.1e-0834.31Show/hide
Query:  VVHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPR--RFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKE
        +V H     SDH P+    L++  G E + R  RP   RFE  W Q  ECK++I K WS   E      + KL+ C  +L +W K    G L   I  K+
Subjt:  VVHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPR--RFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKE

Query:  VEIRDL-TLDRSDSWRYNLWKAENELNKLLEENKQNW
          I  L TL +S+S    L + + EL+ LL + +  W
Subjt:  VEIRDL-TLDRSDSWRYNLWKAENELNKLLEENKQNW

A0A6J1DRA0 uncharacterized protein LOC1110224234.3e-3451.13Show/hide
Query:  VHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI
        + H +FLASDHRPIL  WL  G+ + G  +G+RP RFE  W+   ECK+I+++VW+ +G++    FQ K+ +CL EL KWN  RL GSLRGAI RKEVEI
Subjt:  VHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI

Query:  RDLTLDRSDSWRYNLWKAENELNKLLEENKQNW
        + +  D +  WR NLW+A+ +L KLLEE +  W
Subjt:  RDLTLDRSDSWRYNLWKAENELNKLLEENKQNW

A0A6J1DUG8 uncharacterized protein LOC1110241355.9e-1545.45Show/hide
Query:  VHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI
        V H + L+SDHRPIL SW  E   +      QR  RFE SW Q+  C+ II   W +   I +  FQ K+ +CL+ L +WNK RLN SL+GAIA KE E+
Subjt:  VHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI

Query:  RDLTLDRSDS
          L     DS
Subjt:  RDLTLDRSDS

A0A803PWX1 Uncharacterized protein3.1e-0831.11Show/hide
Query:  VHHFDFLASDHRPILTSWLVEGDGSE-GESRGQRPRRFENSWYQMGECKKIIQKVWSNR-GEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEV
        V   D+  SDHR ++ +  V  DG + G+++ +    FE +W Q  EC +II  +W  R G    V+F+ K+  C   L  WNK +    L   IA+ + 
Subjt:  VHHFDFLASDHRPILTSWLVEGDGSE-GESRGQRPRRFENSWYQMGECKKIIQKVWSNR-GEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEV

Query:  EIRDLTLDRSDSWRYNLWKAENELNKLLEENKQNW
         + +LT+ +       +   E++LN LLE+++Q W
Subjt:  EIRDLTLDRSDSWRYNLWKAENELNKLLEENKQNW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGTGCACCATTTTGATTTCTTAGCCTCGGATCATAGGCCAATTCTTACTTCTTGGCTTGTTGAGGGTGACGGTTCAGAAGGGGAAAGTAGGGGTCAAAGACCGCG
CCGGTTTGAAAATTCGTGGTATCAAATGGGCGAATGTAAGAAGATCATTCAAAAAGTGTGGTCAAATCGAGGGGAGATCAATATGGTAACGTTCCAACGAAAGCTCCAAA
CTTGCTTAGCCGAACTTGGTAAGTGGAATAAATCAAGGCTTAATGGCTCTCTTCGTGGTGCGATTGCTAGGAAAGAAGTTGAAATTCGGGATCTTACTCTGGATAGATCT
GACAGTTGGCGGTATAACCTTTGGAAGGCAGAGAACGAGTTGAACAAGCTTCTTGAAGAGAACAAACAGAATTGGTGGCCTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGTGCACCATTTTGATTTCTTAGCCTCGGATCATAGGCCAATTCTTACTTCTTGGCTTGTTGAGGGTGACGGTTCAGAAGGGGAAAGTAGGGGTCAAAGACCGCG
CCGGTTTGAAAATTCGTGGTATCAAATGGGCGAATGTAAGAAGATCATTCAAAAAGTGTGGTCAAATCGAGGGGAGATCAATATGGTAACGTTCCAACGAAAGCTCCAAA
CTTGCTTAGCCGAACTTGGTAAGTGGAATAAATCAAGGCTTAATGGCTCTCTTCGTGGTGCGATTGCTAGGAAAGAAGTTGAAATTCGGGATCTTACTCTGGATAGATCT
GACAGTTGGCGGTATAACCTTTGGAAGGCAGAGAACGAGTTGAACAAGCTTCTTGAAGAGAACAAACAGAATTGGTGGCCTTTTTAA
Protein sequenceShow/hide protein sequence
MVVHHFDFLASDHRPILTSWLVEGDGSEGESRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEIRDLTLDRS
DSWRYNLWKAENELNKLLEENKQNWWPF