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MS026398 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026398
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription termination factor MTERF15, mitochondrial
Genome locationscaffold402:963716..965053
RNA-Seq ExpressionMS026398
SyntenyMS026398
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142396.1 LOW QUALITY PROTEIN: transcription termination factor MTERF15, mitochondrial-like [Momordica charantia]3.1e-8998.77Show/hide
Query:  MPWKEPRLVTYETENIEKKIDFLI-HKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWK
        MPWKEPRLVTYETENIEKKIDFLI HKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWK
Subjt:  MPWKEPRLVTYETENIEKKIDFLI-HKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWK

Query:  FVGDNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLVKWKLGKMEKGSSGYGKAVR
        FVGDNETKSSSRH IGLWKVFKPQRHPELREDTENMKSFMNSLVKWKLGKMEKGSSGYGKAVR
Subjt:  FVGDNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLVKWKLGKMEKGSSGYGKAVR

XP_022142535.1 transcription termination factor MTERF15, mitochondrial-like isoform X1 [Momordica charantia]3.1e-7393.66Show/hide
Query:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG
        WKEPRLVTYE ENIEKKI FLIHKMKFG+ECL+DVPEYLGINF+KQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMF KFVG
Subjt:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG

Query:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLVK
        DNETKS SRHPIGLWKVFKPQRHPE REDTENMKSFM SLVK
Subjt:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLVK

XP_022142536.1 transcription termination factor MTERF15, mitochondrial-like isoform X2 [Momordica charantia]3.1e-7393.66Show/hide
Query:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG
        WKEPRLVTYE ENIEKKI FLIHKMKFG+ECL+DVPEYLGINF+KQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMF KFVG
Subjt:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG

Query:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLVK
        DNETKS SRHPIGLWKVFKPQRHPE REDTENMKSFM SLVK
Subjt:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLVK

XP_023001078.1 transcription termination factor MTERF15, mitochondrial [Cucurbita maxima]1.0e-6887.94Show/hide
Query:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG
        WKEPRL+TYE ENIEKKIDFL HKMKFGV+CL+DVPEYLGINFEKQIVPRY VIEYL SKGWLGSQVGLREIIKPSRL+FYNLFVKPYPECGK+F KFVG
Subjt:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG

Query:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLV
        DNETKS SRHPIGLWKVFKPQ+HPE +EDT+NMKSFM S V
Subjt:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLV

XP_023519912.1 transcription termination factor MTERF15, mitochondrial [Cucurbita pepo subsp. pepo]2.7e-6987.23Show/hide
Query:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG
        WKEPRL+TYE ENIEKKIDFL HKMKFGV+CL+DVPEYLGINFEKQIVPRY+VIEYL SKGWLGSQVGLREIIKPSRL+FYNLFVKPYPECGKMF KFVG
Subjt:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG

Query:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLV
        DNETKS SRHP+GLWKVFKPQ+HPE +EDT+NMKSFM S +
Subjt:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLV

TrEMBL top hitse value%identityAlignment
A0A6J1CL75 transcription termination factor MTERF15, mitochondrial-like isoform X11.5e-7393.66Show/hide
Query:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG
        WKEPRLVTYE ENIEKKI FLIHKMKFG+ECL+DVPEYLGINF+KQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMF KFVG
Subjt:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG

Query:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLVK
        DNETKS SRHPIGLWKVFKPQRHPE REDTENMKSFM SLVK
Subjt:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLVK

A0A6J1CM22 LOW QUALITY PROTEIN: transcription termination factor MTERF15, mitochondrial-like1.5e-8998.77Show/hide
Query:  MPWKEPRLVTYETENIEKKIDFLI-HKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWK
        MPWKEPRLVTYETENIEKKIDFLI HKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWK
Subjt:  MPWKEPRLVTYETENIEKKIDFLI-HKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWK

Query:  FVGDNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLVKWKLGKMEKGSSGYGKAVR
        FVGDNETKSSSRH IGLWKVFKPQRHPELREDTENMKSFMNSLVKWKLGKMEKGSSGYGKAVR
Subjt:  FVGDNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLVKWKLGKMEKGSSGYGKAVR

A0A6J1CMG9 transcription termination factor MTERF15, mitochondrial-like isoform X21.5e-7393.66Show/hide
Query:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG
        WKEPRLVTYE ENIEKKI FLIHKMKFG+ECL+DVPEYLGINF+KQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMF KFVG
Subjt:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG

Query:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLVK
        DNETKS SRHPIGLWKVFKPQRHPE REDTENMKSFM SLVK
Subjt:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLVK

A0A6J1EK12 transcription termination factor MTERF15, mitochondrial4.2e-6885.82Show/hide
Query:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG
        WKEPRL+TYE ENIEKKIDFL HKMKFGV+CL+DVPEYLGINFEKQIVPRY+VIEYL SKGWLGSQVGLREIIKPSRL+FYNLFVKPYPECGKMF KFVG
Subjt:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG

Query:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLV
        DN+ KS  RHPIGLWKVFKPQ+HPE +EDT+NMKSFM S +
Subjt:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLV

A0A6J1KK29 transcription termination factor MTERF15, mitochondrial5.0e-6987.94Show/hide
Query:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG
        WKEPRL+TYE ENIEKKIDFL HKMKFGV+CL+DVPEYLGINFEKQIVPRY VIEYL SKGWLGSQVGLREIIKPSRL+FYNLFVKPYPECGK+F KFVG
Subjt:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG

Query:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLV
        DNETKS SRHPIGLWKVFKPQ+HPE +EDT+NMKSFM S V
Subjt:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSLV

SwissProt top hitse value%identityAlignment
Q9C6A1 Transcription termination factor MTERF15, mitochondrial3.5e-4356.43Show/hide
Query:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG
        WKEPR++ YE E+IEKKI+FL ++M F + CL DVPEYLG+N +KQIVPRYNVI+YL  KG LG  +GL+ +IKPS  +FYNL+V PYPEC ++F K   
Subjt:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG

Query:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSL
            + + RHP GLWK+ KP  +   +ED +NMKSF+ SL
Subjt:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSL

Arabidopsis top hitse value%identityAlignment
AT1G61980.1 Mitochondrial transcription termination factor family protein7.5e-0932.95Show/hide
Query:  PRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQV-GLREIIKPSRLKFYNLFVKPYPE
        P+ +    E ++KK +FL+ KM + ++ L+  P  LG + EK+ VPR NV++ L SKG +GS++  +  +   +   F N +VK + +
Subjt:  PRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQV-GLREIIKPSRLKFYNLFVKPYPE

AT1G62010.1 Mitochondrial transcription termination factor family protein6.2e-1135.23Show/hide
Query:  PRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQV-GLREIIKPSRLKFYNLFVKPYPE
        P  + Y TE ++KK +FL+ +M + V+ +  +P+ LG + EK+ VPR NVI+ L SKG L S++  +  ++  +   F NL+V  + +
Subjt:  PRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQV-GLREIIKPSRLKFYNLFVKPYPE

AT1G62085.1 Mitochondrial transcription termination factor family protein6.8e-1032.95Show/hide
Query:  PRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQV-GLREIIKPSRLKFYNLFVKPYPE
        P+ +    E ++KK +FL+ KM + ++ ++  P  LG + EK+ +PR NVI+ L SKG LGS++ G+  ++  +  +F   +VK + +
Subjt:  PRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQV-GLREIIKPSRLKFYNLFVKPYPE

AT1G74120.1 Mitochondrial transcription termination factor family protein2.5e-4456.43Show/hide
Query:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG
        WKEPR++ YE E+IEKKI+FL ++M F + CL DVPEYLG+N +KQIVPRYNVI+YL  KG LG  +GL+ +IKPS  +FYNL+V PYPEC ++F K   
Subjt:  WKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVG

Query:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSL
            + + RHP GLWK+ KP  +   +ED +NMKSF+ SL
Subjt:  DNETKSSSRHPIGLWKVFKPQRHPELREDTENMKSFMNSL

AT5G23930.1 Mitochondrial transcription termination factor family protein6.8e-1029.59Show/hide
Query:  KEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPY----PECGKMF
        + P+ +    ++++KK +FL+  M + ++ +   P  LG + EK ++PR NVI+ L S G +G    +  ++   +LKF  LFV+ +    PE   +F
Subjt:  KEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPY----PECGKMF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATGGAAAGAGCCGAGGTTGGTCACTTATGAAACAGAGAACATTGAGAAGAAGATTGACTTCTTGATCCATAAGATGAAATTTGGTGTTGAATGTTTGATTGATGT
TCCAGAATATTTGGGCATCAATTTCGAAAAGCAGATTGTTCCTCGTTACAATGTGATTGAATATTTGGGATCAAAAGGCTGGCTTGGTTCTCAGGTTGGTTTGAGAGAAA
TTATCAAGCCTAGCAGGCTCAAGTTCTACAATCTGTTTGTAAAGCCTTATCCAGAGTGTGGGAAGATGTTCTGGAAATTCGTGGGAGATAATGAAACGAAGAGCTCGAGT
AGGCATCCTATTGGATTATGGAAGGTTTTCAAACCACAAAGACATCCAGAATTAAGAGAAGATACTGAGAACATGAAGTCATTCATGAATTCTCTTGTTAAGTGGAAGCT
TGGTAAGATGGAGAAGGGGTCCTCTGGTTATGGGAAGGCAGTGAGATGTGTCTCAGTTCCCTCTCCTTACTTAGTCTTGGCGGGGTGTAAGAAGGTCGATTTGACTCGTT
TCTTAAAGCCAAAAATGATACTGAATCGACATAATCTTCGCAAAATGCAAGAAAAGCGCCCAGCAAATTGTGATTGCCTGACCATGCCAGGTCCAATGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCATGGAAAGAGCCGAGGTTGGTCACTTATGAAACAGAGAACATTGAGAAGAAGATTGACTTCTTGATCCATAAGATGAAATTTGGTGTTGAATGTTTGATTGATGT
TCCAGAATATTTGGGCATCAATTTCGAAAAGCAGATTGTTCCTCGTTACAATGTGATTGAATATTTGGGATCAAAAGGCTGGCTTGGTTCTCAGGTTGGTTTGAGAGAAA
TTATCAAGCCTAGCAGGCTCAAGTTCTACAATCTGTTTGTAAAGCCTTATCCAGAGTGTGGGAAGATGTTCTGGAAATTCGTGGGAGATAATGAAACGAAGAGCTCGAGT
AGGCATCCTATTGGATTATGGAAGGTTTTCAAACCACAAAGACATCCAGAATTAAGAGAAGATACTGAGAACATGAAGTCATTCATGAATTCTCTTGTTAAGTGGAAGCT
TGGTAAGATGGAGAAGGGGTCCTCTGGTTATGGGAAGGCAGTGAGATGTGTCTCAGTTCCCTCTCCTTACTTAGTCTTGGCGGGGTGTAAGAAGGTCGATTTGACTCGTT
TCTTAAAGCCAAAAATGATACTGAATCGACATAATCTTCGCAAAATGCAAGAAAAGCGCCCAGCAAATTGTGATTGCCTGACCATGCCAGGTCCAATGAGCTAG
Protein sequenceShow/hide protein sequence
MPWKEPRLVTYETENIEKKIDFLIHKMKFGVECLIDVPEYLGINFEKQIVPRYNVIEYLGSKGWLGSQVGLREIIKPSRLKFYNLFVKPYPECGKMFWKFVGDNETKSSS
RHPIGLWKVFKPQRHPELREDTENMKSFMNSLVKWKLGKMEKGSSGYGKAVRCVSVPSPYLVLAGCKKVDLTRFLKPKMILNRHNLRKMQEKRPANCDCLTMPGPMS