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MS026477 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026477
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold541:273915..274365
RNA-Seq ExpressionMS026477
SyntenyMS026477
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159860.1 uncharacterized protein LOC111026150 [Momordica charantia]9.8e-1346.02Show/hide
Query:  MAGGGWVLGISLLDADKVVTIDKIKANNNVWSMVSSSGRLEELSEA----KMTEQKVGDDEDAAAVGSNTILESIEAISVNCIEIRDQHDLRNLPNFSLL
        MA   W+  IS LDA+  V +DKIKAN  ++        + +   A    +M EQKVGDD  AA + SNT+L S+E I++NC+EI  QHD  NL N SL 
Subjt:  MAGGGWVLGISLLDADKVVTIDKIKANNNVWSMVSSSGRLEELSEA----KMTEQKVGDDEDAAAVGSNTILESIEAISVNCIEIRDQHDLRNLPNFSLL

Query:  VIVENKSTLEAII
        V VE+K+T + II
Subjt:  VIVENKSTLEAII
TrEMBL top hitse value%identityAlignment
A0A6J1DZZ2 uncharacterized protein LOC1110261504.8e-1346.02Show/hide
Query:  MAGGGWVLGISLLDADKVVTIDKIKANNNVWSMVSSSGRLEELSEA----KMTEQKVGDDEDAAAVGSNTILESIEAISVNCIEIRDQHDLRNLPNFSLL
        MA   W+  IS LDA+  V +DKIKAN  ++        + +   A    +M EQKVGDD  AA + SNT+L S+E I++NC+EI  QHD  NL N SL 
Subjt:  MAGGGWVLGISLLDADKVVTIDKIKANNNVWSMVSSSGRLEELSEA----KMTEQKVGDDEDAAAVGSNTILESIEAISVNCIEIRDQHDLRNLPNFSLL

Query:  VIVENKSTLEAII
        V VE+K+T + II
Subjt:  VIVENKSTLEAII
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCGGGCGGTGGTTGGGTGTTGGGGATCTCCCTGTTGGATGCTGATAAAGTTGTTACGATTGACAAAATCAAAGCCAACAATAATGTATGGTCCATGGTTTCATC
ATCCGGGCGTCTTGAAGAGTTATCAGAGGCAAAGATGACGGAGCAGAAGGTGGGCGACGACGAAGATGCGGCAGCGGTTGGCTCAAACACCATTTTGGAATCTATAGAGG
CTATCAGTGTTAATTGTATTGAAATCCGTGACCAACATGATTTGAGGAATTTGCCTAATTTTTCCTTACTTGTCATAGTAGAGAATAAGTCAACTTTGGAGGCAATTATT
TTCCTTCAAATCCTAAACAGGGTGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGCGGGCGGTGGTTGGGTGTTGGGGATCTCCCTGTTGGATGCTGATAAAGTTGTTACGATTGACAAAATCAAAGCCAACAATAATGTATGGTCCATGGTTTCATC
ATCCGGGCGTCTTGAAGAGTTATCAGAGGCAAAGATGACGGAGCAGAAGGTGGGCGACGACGAAGATGCGGCAGCGGTTGGCTCAAACACCATTTTGGAATCTATAGAGG
CTATCAGTGTTAATTGTATTGAAATCCGTGACCAACATGATTTGAGGAATTTGCCTAATTTTTCCTTACTTGTCATAGTAGAGAATAAGTCAACTTTGGAGGCAATTATT
TTCCTTCAAATCCTAAACAGGGTGCCATAA
Protein sequenceShow/hide protein sequence
MMAGGGWVLGISLLDADKVVTIDKIKANNNVWSMVSSSGRLEELSEAKMTEQKVGDDEDAAAVGSNTILESIEAISVNCIEIRDQHDLRNLPNFSLLVIVENKSTLEAII
FLQILNRVP