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MS026499 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026499
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglycine-rich protein DOT1-like
Genome locationscaffold607:1498353..1498847
RNA-Seq ExpressionMS026499
SyntenyMS026499
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54297.1 hypothetical protein Csa_018030 [Cucumis sativus]9.4e-0572.53Show/hide
Query:  SFIIIPVVFFSVCIVFTVLSLLCGLSGGGGTSGGGADFGGGDHAGGGHDLEDGGGGGGGYDGGGGGGGYDGGGGGGGGGGGGGCGGGGGGG
        +FIIIPVVF S+C+VF VLSLLC  +GGG ++G GA FGG D  GGG D  + GGGGGGYD  GGGGGYDGGGG GGGGGGGG GGGGGGG
Subjt:  SFIIIPVVFFSVCIVFTVLSLLCGLSGGGGTSGGGADFGGGDHAGGGHDLEDGGGGGGGYDGGGGGGGYDGGGGGGGGGGGGGCGGGGGGG
XP_022151509.1 glycine-rich protein DOT1-like [Momordica charantia]6.1e-2094.79Show/hide
Query:  SFIIIPVVFFSVCIVFTVLSLLCGLSGGGGTSGGGADF-GGGDHAGGGHDLEDGGGGGGGYDGGGGGGGYDGGGGGGGGGGGGGCGGGGGGGASAC
        +FIIIPVVFFSVCIVFTVLSLLCGLS GGGTSGGGADF GGGDHAGGGHDLEDGGGGGGGYDGGGGGG YDGGGGGGGGGGGGGC GGGGGGASAC
Subjt:  SFIIIPVVFFSVCIVFTVLSLLCGLSGGGGTSGGGADF-GGGDHAGGGHDLEDGGGGGGGYDGGGGGGGYDGGGGGGGGGGGGGCGGGGGGGASAC
TrEMBL top hitse value%identityAlignment
A0A0A0L128 Uncharacterized protein4.6e-0572.53Show/hide
Query:  SFIIIPVVFFSVCIVFTVLSLLCGLSGGGGTSGGGADFGGGDHAGGGHDLEDGGGGGGGYDGGGGGGGYDGGGGGGGGGGGGGCGGGGGGG
        +FIIIPVVF S+C+VF VLSLLC  +GGG ++G GA FGG D  GGG D  + GGGGGGYD  GGGGGYDGGGG GGGGGGGG GGGGGGG
Subjt:  SFIIIPVVFFSVCIVFTVLSLLCGLSGGGGTSGGGADFGGGDHAGGGHDLEDGGGGGGGYDGGGGGGGYDGGGGGGGGGGGGGCGGGGGGG
A0A6J1DDA5 glycine-rich protein DOT1-like3.0e-2094.79Show/hide
Query:  SFIIIPVVFFSVCIVFTVLSLLCGLSGGGGTSGGGADF-GGGDHAGGGHDLEDGGGGGGGYDGGGGGGGYDGGGGGGGGGGGGGCGGGGGGGASAC
        +FIIIPVVFFSVCIVFTVLSLLCGLS GGGTSGGGADF GGGDHAGGGHDLEDGGGGGGGYDGGGGGG YDGGGGGGGGGGGGGC GGGGGGASAC
Subjt:  SFIIIPVVFFSVCIVFTVLSLLCGLSGGGGTSGGGADF-GGGDHAGGGHDLEDGGGGGGGYDGGGGGGGYDGGGGGGGGGGGGGCGGGGGGGASAC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACGGAGCGACTTTTCCATAATCACGGTGGAATGATTTCAGAAATAATTCGATCGTTTATTATAATCCCAGTGGTCTTTTTTTCCGTTTGTATTGTTTTCACCGT
GTTGAGTTTACTTTGCGGGTTGAGCGGTGGTGGCGGTACCAGCGGAGGCGGCGCTGATTTTGGTGGCGGCGACCACGCAGGAGGAGGCCATGATCTCGAAGATGGAGGTG
GCGGCGGTGGAGGTTATGATGGAGGTGGCGGTGGTGGAGGTTATGATGGAGGTGGCGGAGGTGGAGGCGGCGGCGGTGGGGGAGGTTGTGGCGGTGGCGGTGGCGGCGGC
GCCTCTGCTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAACGGAGCGACTTTTCCATAATCACGGTGGAATGATTTCAGAAATAATTCGATCGTTTATTATAATCCCAGTGGTCTTTTTTTCCGTTTGTATTGTTTTCACCGT
GTTGAGTTTACTTTGCGGGTTGAGCGGTGGTGGCGGTACCAGCGGAGGCGGCGCTGATTTTGGTGGCGGCGACCACGCAGGAGGAGGCCATGATCTCGAAGATGGAGGTG
GCGGCGGTGGAGGTTATGATGGAGGTGGCGGTGGTGGAGGTTATGATGGAGGTGGCGGAGGTGGAGGCGGCGGCGGTGGGGGAGGTTGTGGCGGTGGCGGTGGCGGCGGC
GCCTCTGCTTGTTGA
Protein sequenceShow/hide protein sequence
MSTERLFHNHGGMISEIIRSFIIIPVVFFSVCIVFTVLSLLCGLSGGGGTSGGGADFGGGDHAGGGHDLEDGGGGGGGYDGGGGGGGYDGGGGGGGGGGGGGCGGGGGGG
ASAC