; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS026500 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026500
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglycine-rich protein 23-like
Genome locationscaffold607:1501393..1509294
RNA-Seq ExpressionMS026500
SyntenyMS026500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595345.1 hypothetical protein SDJN03_11898, partial [Cucurbita argyrosperma subsp. sororia]6.0e-0950.88Show/hide
Query:  ILVLHLISARKVSKEKAT--SRSRSYVEDRNRIGIVVDDGIISNMGTSSTFSGGNGDGYSGWGWDWTFSGAGDTCN---DGGGGCDVGGGGGGDGGNDNG
        +L+  L+  R+VSK  A+   +S SYVE  NRIGIVVDDG  S +GT+  F+G    GY GWGWDWTFS  GDT N   +GGGGCDVGGGGG       G
Subjt:  ILVLHLISARKVSKEKAT--SRSRSYVEDRNRIGIVVDDGIISNMGTSSTFSGGNGDGYSGWGWDWTFSGAGDTCN---DGGGGCDVGGGGGGDGGNDNG

Query:  GGGNGGLSGGTGDIGGGGGGASSHDGGGGGGGGGFS-DHPGGGGGDGEASYDHDKTNLDHGGGGGGGAGGEASYDHERMSQNHDGGGGGASHDHGGGGS-
         G + G   G G   G G GAS H+ GGGGGG   S D  GGGGG          T  DHGGGG     G  S     +S +H GGGGGAS+DHGGGG  
Subjt:  GGGNGGLSGGTGDIGGGGGGASSHDGGGGGGGGGFS-DHPGGGGGDGEASYDHDKTNLDHGGGGGGGAGGEASYDHERMSQNHDGGGGGASHDHGGGGS-

Query:  ---GGGGGAVSYDHGGGGGGGGSSFW
           GGGGG   +     GG GGSSFW
Subjt:  ---GGGGGAVSYDHGGGGGGGGSSFW

XP_022931867.1 glycine-rich protein 23-like [Cucurbita moschata]6.6e-0850.44Show/hide
Query:  ILVLHLISARKVSKEKAT--SRSRSYVEDRNRIGIVVDDGIISNMGTSSTFSGGNGDGYSGWGWDWTFSGAGDTCN---DGGGGCDVGGGGGGDGGNDNG
        +L+  L+  R+VSK  A+   +S SYVE  NRIGIVVDDG  S +GT+  F+G    GY GWGWDWTFS  GDT N   +GGGGCDVGGGGG       G
Subjt:  ILVLHLISARKVSKEKAT--SRSRSYVEDRNRIGIVVDDGIISNMGTSSTFSGGNGDGYSGWGWDWTFSGAGDTCN---DGGGGCDVGGGGGGDGGNDNG

Query:  GGGNGGLSGGTGDIGGGGGGASSHDGGGGGGGGGFS-DHPGGGGGDGEASYDHDKTNLDHGGGGGGGAGGEASYDHERMSQNHDGGGGGASHDHGGGGS-
         G + G   G G   G G GAS H+ GGG GG   S D  GGGGG          T  D GGGG     G  S     +S +H GGGGGAS+DHGGGG  
Subjt:  GGGNGGLSGGTGDIGGGGGGASSHDGGGGGGGGGFS-DHPGGGGGDGEASYDHDKTNLDHGGGGGGGAGGEASYDHERMSQNHDGGGGGASHDHGGGGS-

Query:  ---GGGGGAVSYDHGGGGGGGGSSFW
           GGGGG   +     GGGGGSSFW
Subjt:  ---GGGGGAVSYDHGGGGGGGGSSFW

XP_022966633.1 loricrin-like [Cucurbita maxima]7.8e-0951.29Show/hide
Query:  ILVLHLISARKVSKEKAT--SRSRSYVEDRNRIGIVVDDGIISNMGTSSTFSGGNGDGYSGWGWDWTFSGAGDTCN-DGGGGCDVGGGGGGDGGNDNGGG
        +L+  L+  R+VSK  A+   +S SYVE  NRIGIVVDDG  S +GT+  F+G    GY GWGWDWTFS  GDT N + GGGCDVGGGGG       G G
Subjt:  ILVLHLISARKVSKEKAT--SRSRSYVEDRNRIGIVVDDGIISNMGTSSTFSGGNGDGYSGWGWDWTFSGAGDTCN-DGGGGCDVGGGGGGDGGNDNGGG

Query:  GNGGLSGGTGDIGGGGGGASSHDGGGGGGGGGFS-DHPGGGGGDGEASYDHDKTNLDHGGGGGGGA-GGEASYDHERMSQNHDGGGGGASHDHGGGGSG-
         + G   G G   G G GAS H+ GGG GG   S D  GGGGG          T  DHGGGG     GG +++     + +H GGG GASHDHGGGG G 
Subjt:  GNGGLSGGTGDIGGGGGGASSHDGGGGGGGGGFS-DHPGGGGGDGEASYDHDKTNLDHGGGGGGGA-GGEASYDHERMSQNHDGGGGGASHDHGGGGSG-

Query:  ----GGGGAVSYDHGGG------GGGGGSSFW
            GGGG VS D+GGG      GGGGGSSFW
Subjt:  ----GGGGAVSYDHGGG------GGGGGSSFW

XP_023518097.1 glycine-rich protein 5-like [Cucurbita pepo subsp. pepo]8.6e-0848.52Show/hide
Query:  ILVLHLISARKVSKEKAT--SRSRSYVEDRNRIGIVVDDGIISNMGTSSTFSGGNGDGYSGWGWDWTFSGAGDTCN---DGGGGCDVGGGGG----GDGG
        +L+  L+  R+VSK   +   +S S VE  NR+GIVVDDG  S +GT+  F+G    GY GWGWDWTFS  GD+ N   +G GGCDVGGGGG    G  G
Subjt:  ILVLHLISARKVSKEKAT--SRSRSYVEDRNRIGIVVDDGIISNMGTSSTFSGGNGDGYSGWGWDWTFSGAGDTCN---DGGGGCDVGGGGG----GDGG

Query:  NDNGGG-----GNGGLSGGT-GDIGGGGGGASSHDGGGGGGGGGFSDHPGGGGGDGEASYDHDKTNLDHGGG--GGGGAGGEASYDHERMSQNHDGGGGG
         D G G     GNG  +G +  + GGG GG +S     GGGGG  SDH GGG      S+  D  + + GGG    GG GG A+YD       H GGGGG
Subjt:  NDNGGG-----GNGGLSGGT-GDIGGGGGGASSHDGGGGGGGGGFSDHPGGGGGDGEASYDHDKTNLDHGGG--GGGGAGGEASYDHERMSQNHDGGGGG

Query:  ASHDHGGGGS----GGGGGAVSYDHGGGGGGGGSSFW
        AS+DHGGGG     GGGGG   +     GGGGGSSFW
Subjt:  ASHDHGGGGS----GGGGGAVSYDHGGGGGGGGSSFW

TrEMBL top hitse value%identityAlignment
A0A6J1EUX9 glycine-rich protein 23-like3.2e-0850.44Show/hide
Query:  ILVLHLISARKVSKEKAT--SRSRSYVEDRNRIGIVVDDGIISNMGTSSTFSGGNGDGYSGWGWDWTFSGAGDTCN---DGGGGCDVGGGGGGDGGNDNG
        +L+  L+  R+VSK  A+   +S SYVE  NRIGIVVDDG  S +GT+  F+G    GY GWGWDWTFS  GDT N   +GGGGCDVGGGGG       G
Subjt:  ILVLHLISARKVSKEKAT--SRSRSYVEDRNRIGIVVDDGIISNMGTSSTFSGGNGDGYSGWGWDWTFSGAGDTCN---DGGGGCDVGGGGGGDGGNDNG

Query:  GGGNGGLSGGTGDIGGGGGGASSHDGGGGGGGGGFS-DHPGGGGGDGEASYDHDKTNLDHGGGGGGGAGGEASYDHERMSQNHDGGGGGASHDHGGGGS-
         G + G   G G   G G GAS H+ GGG GG   S D  GGGGG          T  D GGGG     G  S     +S +H GGGGGAS+DHGGGG  
Subjt:  GGGNGGLSGGTGDIGGGGGGASSHDGGGGGGGGGFS-DHPGGGGGDGEASYDHDKTNLDHGGGGGGGAGGEASYDHERMSQNHDGGGGGASHDHGGGGS-

Query:  ---GGGGGAVSYDHGGGGGGGGSSFW
           GGGGG   +     GGGGGSSFW
Subjt:  ---GGGGGAVSYDHGGGGGGGGSSFW

A0A6J1HSN5 loricrin-like3.8e-0951.29Show/hide
Query:  ILVLHLISARKVSKEKAT--SRSRSYVEDRNRIGIVVDDGIISNMGTSSTFSGGNGDGYSGWGWDWTFSGAGDTCN-DGGGGCDVGGGGGGDGGNDNGGG
        +L+  L+  R+VSK  A+   +S SYVE  NRIGIVVDDG  S +GT+  F+G    GY GWGWDWTFS  GDT N + GGGCDVGGGGG       G G
Subjt:  ILVLHLISARKVSKEKAT--SRSRSYVEDRNRIGIVVDDGIISNMGTSSTFSGGNGDGYSGWGWDWTFSGAGDTCN-DGGGGCDVGGGGGGDGGNDNGGG

Query:  GNGGLSGGTGDIGGGGGGASSHDGGGGGGGGGFS-DHPGGGGGDGEASYDHDKTNLDHGGGGGGGA-GGEASYDHERMSQNHDGGGGGASHDHGGGGSG-
         + G   G G   G G GAS H+ GGG GG   S D  GGGGG          T  DHGGGG     GG +++     + +H GGG GASHDHGGGG G 
Subjt:  GNGGLSGGTGDIGGGGGGASSHDGGGGGGGGGFS-DHPGGGGGDGEASYDHDKTNLDHGGGGGGGA-GGEASYDHERMSQNHDGGGGGASHDHGGGGSG-

Query:  ----GGGGAVSYDHGGG------GGGGGSSFW
            GGGG VS D+GGG      GGGGGSSFW
Subjt:  ----GGGGAVSYDHGGG------GGGGGSSFW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATGCACCGTTTATTATAATCCCAGTGGTTTTTGGTTGCGTTTTGATCGTTGCCCTTGTTTTGAGTTTGCTTTGCGGTGGGGGCAGAGCTGGTGGCAGATCCGG
CGGAGGCGGCGCTCATTTTGGTGGCGCCGCCGGCCACCACTTAGGAGGAGGCCATCATTTCAGAGCTGGAGGACACGTTGGTGGCGGTGGCGCATGTGGCGGCGGTGGCG
GTGGGGGCTCTGCCTCTGGTGACGTGGTAAACGACAAGTTGGCCGTCGGTGTAAATGGTGTTGGCGACGACGGCGTCGACGACGCTGGTGGTAAAATTGACCTGAGACCC
AGAAGTGGTAACATTCAGGGGAAACTGGCGGGCGTTGCTGTTTCCGGCCTGGGTACGAAGAGGGTTGCTGACGGAATGAAATTGGGACATGGAAACGAAATTTGGGAGGA
CATGGAACTGAACCAGCTCAACTTTCTACTGGTCGGAGAGGGAATTGAGAGTTCCAGGTTTCAGATTGGCGAAGGCGTTGTCTGGAGGAGTAAACAGAGTGAGGCCCTGC
CCTTGGTTGGAATTGTTGAGCTGATTATTGATTTGGTCGCTCTGTTGTACGCTTTTGAGGAGTTTAATGAAGGTTGTGAACTGGTCGGCCTTTACGAGGATGACCGTGAT
GTTGGTCGGACCGGCGGGGCCCGGCGGTTGAGTCGACAGAGCAGAAACAAAGGAACAGAGGAAGGCCAGAAAGGAGGGAATGGGGAGGAGCTTCTTCATGATTGGTTTTG
ATTTTGTTTTTGAGCCATCGGAGGGAGAGGAGAAGGGAATCTAATAAGAGTGATAATTTGAAGGAATTGAATTGGTTTGGTGGGAGGGAAGAGAGGGGATTTTGCTCGAG
GAAGCAGAAAAAACAGAGCAGAAAGTGAAGGATGAAAGGTGGGGTTTTTGGTTTGGTGGGGATTGAAAAGTGCAAACATTTTGGTTTTGCACCTGATAAGTGCAAGGAAA
GTTTCTAAGGAAAAAGCTACGAGTCGAAGTCGAAGTTATGTTGAAGATAGAAATCGAATTGGGATAGTTGTGGATGATGGGATCATCAGCAATATGGGAACAAGCAGCAC
GTTTTCGGGTGGTAATGGAGATGGGTATAGTGGTTGGGGTTGGGATTGGACTTTTAGTGGTGCAGGAGATACCTGCAACGACGGAGGAGGAGGCTGTGATGTCGGAGGTG
GCGGTGGAGGTGATGGAGGCAATGATAATGGTGGAGGAGGAAATGGTGGTCTTAGTGGAGGAACAGGTGACATTGGAGGCGGAGGTGGTGGAGCGAGTTCTCATGACGGA
GGTGGCGGAGGTGGAGGCGGAGGGTTTTCTGACCACCCTGGTGGTGGAGGTGGAGATGGAGAAGCAAGTTATGATCATGACAAAACGAATCTTGATCACGGTGGAGGTGG
AGGTGGTGGTGCAGGTGGAGAAGCGAGTTATGATCACGAAAGAATGAGTCAGAATCACGATGGAGGTGGTGGTGGAGCAAGTCATGATCACGGAGGAGGTGGAAGTGGTG
GTGGAGGTGGCGCAGTAAGTTATGATCACGGTGGAGGTGGAGGGGGTGGAGGATCATCTTTTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATGCACCGTTTATTATAATCCCAGTGGTTTTTGGTTGCGTTTTGATCGTTGCCCTTGTTTTGAGTTTGCTTTGCGGTGGGGGCAGAGCTGGTGGCAGATCCGG
CGGAGGCGGCGCTCATTTTGGTGGCGCCGCCGGCCACCACTTAGGAGGAGGCCATCATTTCAGAGCTGGAGGACACGTTGGTGGCGGTGGCGCATGTGGCGGCGGTGGCG
GTGGGGGCTCTGCCTCTGGTGACGTGGTAAACGACAAGTTGGCCGTCGGTGTAAATGGTGTTGGCGACGACGGCGTCGACGACGCTGGTGGTAAAATTGACCTGAGACCC
AGAAGTGGTAACATTCAGGGGAAACTGGCGGGCGTTGCTGTTTCCGGCCTGGGTACGAAGAGGGTTGCTGACGGAATGAAATTGGGACATGGAAACGAAATTTGGGAGGA
CATGGAACTGAACCAGCTCAACTTTCTACTGGTCGGAGAGGGAATTGAGAGTTCCAGGTTTCAGATTGGCGAAGGCGTTGTCTGGAGGAGTAAACAGAGTGAGGCCCTGC
CCTTGGTTGGAATTGTTGAGCTGATTATTGATTTGGTCGCTCTGTTGTACGCTTTTGAGGAGTTTAATGAAGGTTGTGAACTGGTCGGCCTTTACGAGGATGACCGTGAT
GTTGGTCGGACCGGCGGGGCCCGGCGGTTGAGTCGACAGAGCAGAAACAAAGGAACAGAGGAAGGCCAGAAAGGAGGGAATGGGGAGGAGCTTCTTCATGATTGGTTTTG
ATTTTGTTTTTGAGCCATCGGAGGGAGAGGAGAAGGGAATCTAATAAGAGTGATAATTTGAAGGAATTGAATTGGTTTGGTGGGAGGGAAGAGAGGGGATTTTGCTCGAG
GAAGCAGAAAAAACAGAGCAGAAAGTGAAGGATGAAAGGTGGGGTTTTTGGTTTGGTGGGGATTGAAAAGTGCAAACATTTTGGTTTTGCACCTGATAAGTGCAAGGAAA
GTTTCTAAGGAAAAAGCTACGAGTCGAAGTCGAAGTTATGTTGAAGATAGAAATCGAATTGGGATAGTTGTGGATGATGGGATCATCAGCAATATGGGAACAAGCAGCAC
GTTTTCGGGTGGTAATGGAGATGGGTATAGTGGTTGGGGTTGGGATTGGACTTTTAGTGGTGCAGGAGATACCTGCAACGACGGAGGAGGAGGCTGTGATGTCGGAGGTG
GCGGTGGAGGTGATGGAGGCAATGATAATGGTGGAGGAGGAAATGGTGGTCTTAGTGGAGGAACAGGTGACATTGGAGGCGGAGGTGGTGGAGCGAGTTCTCATGACGGA
GGTGGCGGAGGTGGAGGCGGAGGGTTTTCTGACCACCCTGGTGGTGGAGGTGGAGATGGAGAAGCAAGTTATGATCATGACAAAACGAATCTTGATCACGGTGGAGGTGG
AGGTGGTGGTGCAGGTGGAGAAGCGAGTTATGATCACGAAAGAATGAGTCAGAATCACGATGGAGGTGGTGGTGGAGCAAGTCATGATCACGGAGGAGGTGGAAGTGGTG
GTGGAGGTGGCGCAGTAAGTTATGATCACGGTGGAGGTGGAGGGGGTGGAGGATCATCTTTTTGGTGA
Protein sequenceShow/hide protein sequence
MVDAPFIIIPVVFGCVLIVALVLSLLCGGGRAGGRSGGGGAHFGGAAGHHLGGGHHFRAGGHVGGGGACGGGGGGGSASGDVVNDKLAVGVNGVGDDGVDDAGGKIDLRP
RSGNIQGKLAGVAVSGLGTKRVADGMKLGHGNEIWEDMELNQLNFLLVGEGIESSRFQIGEGVVWRSKQSEALPLVGIVELIIDLVALLYAFEEFNEGCELVGLYEDDRD
VGRTGGARRLSRQSRNKGTEEGQKGGNGEELLHDWFUFCFUAIGGRGEGNLIRVIIURNUIGLVGGKRGDFARGSRKNRAESEGUKVGFLVWWGLKSANILVLHLISARK
VSKEKATSRSRSYVEDRNRIGIVVDDGIISNMGTSSTFSGGNGDGYSGWGWDWTFSGAGDTCNDGGGGCDVGGGGGGDGGNDNGGGGNGGLSGGTGDIGGGGGGASSHDG
GGGGGGGGFSDHPGGGGGDGEASYDHDKTNLDHGGGGGGGAGGEASYDHERMSQNHDGGGGGASHDHGGGGSGGGGGAVSYDHGGGGGGGGSSFW