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MS026503 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026503
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEarly nodulin-75-like
Genome locationscaffold607:1550862..1551164
RNA-Seq ExpressionMS026503
SyntenyMS026503
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045171.1 early nodulin-75-like [Cucumis melo var. makuwa]3.6e-0856.88Show/hide
Query:  NPYG-YNYGYGYYPYPDQGYPKYH-QDVPP---YGYTY-NY-HGYMHNPYPYQGYPY-YVAAAAPPAPAYYHQQQNYGSN-SGGILSSMLSSVVGNMG-A
        NPYG Y+YG   YPYP QGYPKY  Q VPP   YG  Y NY HG++H PYP   Y Y Y   +    P  Y+ QQNYG+N + GIL SMLSSV GN   A
Subjt:  NPYG-YNYGYGYYPYPDQGYPKYH-QDVPP---YGYTY-NY-HGYMHNPYPYQGYPY-YVAAAAPPAPAYYHQQQNYGSN-SGGILSSMLSSVVGNMG-A

Query:  GFISSLLFS
         FISSL FS
Subjt:  GFISSLLFS
KAE8649545.1 hypothetical protein Csa_017919 [Cucumis sativus]8.9e-0751.92Show/hide
Query:  NPYGYNYGYGYYPYPDQGYPKYH-QDVPP-----YGYTYNYHGYMH------NPYPYQGYPYYVAAAAPPA----PAYYHQQQNYGSN-SGGILSSMLSS
        NPYG+ Y YG YPYP QGYPKY  Q VPP      GYT   HG++H        Y YQ YPY      PP+    P  Y+ QQNY +N  GGIL+SMLSS
Subjt:  NPYGYNYGYGYYPYPDQGYPKYH-QDVPP-----YGYTYNYHGYMH------NPYPYQGYPYYVAAAAPPA----PAYYHQQQNYGSN-SGGILSSMLSS

Query:  VVGN
        V GN
Subjt:  VVGN
TrEMBL top hitse value%identityAlignment
A0A0A0KZN9 Uncharacterized protein2.3e-0851.28Show/hide
Query:  NPYGYNYGYGYYPYPDQGYPKYH-QDVPP-----YGYTYNYHGYMH------NPYPYQGYPYYVAAAAPPA----PAYYHQQQNYGSN-SGGILSSMLSS
        NPYG+ Y YG YPYP QGYPKY  Q VPP      GYT   HG++H        Y YQ YPY      PP+    P  Y+ QQNY +N  GGIL+SMLSS
Subjt:  NPYGYNYGYGYYPYPDQGYPKYH-QDVPP-----YGYTYNYHGYMH------NPYPYQGYPYYVAAAAPPA----PAYYHQQQNYGSN-SGGILSSMLSS

Query:  VVGNMG-AGFISSLLFS
        V GN   A F+SSL F+
Subjt:  VVGNMG-AGFISSLLFS
A0A5A7TUH5 Early nodulin-75-like1.7e-0856.88Show/hide
Query:  NPYG-YNYGYGYYPYPDQGYPKYH-QDVPP---YGYTY-NY-HGYMHNPYPYQGYPY-YVAAAAPPAPAYYHQQQNYGSN-SGGILSSMLSSVVGNMG-A
        NPYG Y+YG   YPYP QGYPKY  Q VPP   YG  Y NY HG++H PYP   Y Y Y   +    P  Y+ QQNYG+N + GIL SMLSSV GN   A
Subjt:  NPYG-YNYGYGYYPYPDQGYPKYH-QDVPP---YGYTY-NY-HGYMHNPYPYQGYPY-YVAAAAPPAPAYYHQQQNYGSN-SGGILSSMLSSVVGNMG-A

Query:  GFISSLLFS
         FISSL FS
Subjt:  GFISSLLFS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCATATGGTTATAATTATGGCTATGGATATTATCCATATCCTGATCAAGGATATCCTAAGTACCACCAAGATGTTCCTCCTTATGGATACACTTATAACTATCA
CGGATACATGCACAATCCTTATCCTTATCAAGGATATCCTTATTATGTTGCTGCTGCAGCCCCTCCTGCTCCTGCATATTATCATCAGCAACAAAACTATGGCTCGAACT
CGGGCGGGATTCTGTCGTCGATGCTATCTTCTGTGGTTGGGAATATGGGGGCTGGCTTCATCTCTTCTCTTCTGTTTAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCATATGGTTATAATTATGGCTATGGATATTATCCATATCCTGATCAAGGATATCCTAAGTACCACCAAGATGTTCCTCCTTATGGATACACTTATAACTATCA
CGGATACATGCACAATCCTTATCCTTATCAAGGATATCCTTATTATGTTGCTGCTGCAGCCCCTCCTGCTCCTGCATATTATCATCAGCAACAAAACTATGGCTCGAACT
CGGGCGGGATTCTGTCGTCGATGCTATCTTCTGTGGTTGGGAATATGGGGGCTGGCTTCATCTCTTCTCTTCTGTTTAGCTAA
Protein sequenceShow/hide protein sequence
MNPYGYNYGYGYYPYPDQGYPKYHQDVPPYGYTYNYHGYMHNPYPYQGYPYYVAAAAPPAPAYYHQQQNYGSNSGGILSSMLSSVVGNMGAGFISSLLFS