; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS026549 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026549
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNeurofilament heavy protein, putative
Genome locationscaffold19:582925..583182
RNA-Seq ExpressionMS026549
SyntenyMS026549
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5527610.1 hypothetical protein DKX38_021457 [Salix brachista]1.7e-0658.06Show/hide
Query:  ICSSMGEEEKVKE----------------GEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMV
        ICSS  EEE  KE                 EEI +SM  E M M VVGICSS VEEE  MV   ICSSMVV  MVMV V  CSSMVEEEMVMV
Subjt:  ICSSMGEEEKVKE----------------GEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMV

KAB5527611.1 hypothetical protein DKX38_021458 [Salix brachista]1.7e-0658.06Show/hide
Query:  ICSSMGEEEKVKE----------------GEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMV
        ICSS  EEE  KE                 EEI +SM  E M M VVGICSS VEEE  MV   ICSSMVV  MVMV V  CSSMVEEEMVMV
Subjt:  ICSSMGEEEKVKE----------------GEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMV

KAG5572071.1 hypothetical protein H5410_061837 [Solanum commersonii]9.8e-0761.33Show/hide
Query:  MVVGEICSSMGEEEKVKEGEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMV
        MVV E C+SM E E V E EE  +S   EVM MVVVG C+S+VEEEM MVV   CSS  V E  MVVVG CSS V
Subjt:  MVVGEICSSMGEEEKVKEGEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMV

KAG5588758.1 hypothetical protein H5410_049192 [Solanum commersonii]3.9e-1168.29Show/hide
Query:  MVVGEICSSMGEEEKVKEGEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMV
        +VV E CSSM EEE  +   E  +SM EE ME VVVG CSSMVEEEMAMVV   CSS  VEEM MVV   CSSMVEEEMVMV
Subjt:  MVVGEICSSMGEEEKVKEGEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMV

KEH40672.1 neurofilament heavy protein, putative [Medicago truncatula]8.0e-0965.48Show/hide
Query:  MVVGEICSSMGEEEKVKEGEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMVVV
        MV   ICSSM  EEK      I +SM  E   MV VGICSSMV EE AMV VGICSSMVVEE  MV VGICSSMV EE  MV V
Subjt:  MVVGEICSSMGEEEKVKEGEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMVVV

TrEMBL top hitse value%identityAlignment
A0A072VFT3 Neurofilament heavy protein, putative3.9e-0965.48Show/hide
Query:  MVVGEICSSMGEEEKVKEGEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMVVV
        MV   ICSSM  EEK      I +SM  E   MV VGICSSMV EE AMV VGICSSMVVEE  MV VGICSSMV EE  MV V
Subjt:  MVVGEICSSMGEEEKVKEGEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMVVV

A0A5N5K7P8 Uncharacterized protein8.1e-0758.06Show/hide
Query:  ICSSMGEEEKVKE----------------GEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMV
        ICSS  EEE  KE                 EEI +SM  E M M VVGICSS VEEE  MV   ICSSMVV  MVMV V  CSSMVEEEMVMV
Subjt:  ICSSMGEEEKVKE----------------GEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMV

A0A5N5KBR6 Uncharacterized protein8.1e-0758.06Show/hide
Query:  ICSSMGEEEKVKE----------------GEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMV
        ICSS  EEE  KE                 EEI +SM  E M M VVGICSS VEEE  MV   ICSSMVV  MVMV V  CSSMVEEEMVMV
Subjt:  ICSSMGEEEKVKE----------------GEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMV

A0A6A6LFB9 Uncharacterized protein1.4e-0660.47Show/hide
Query:  MVVGEICSSMGEEEKVKEGEEIG--NSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMVVV
        MVV EICSS   E +  E  E+G  ++M EE M MV  G CS+M EE MAMVV   CSSMVVEEM MVVVGIC+S     MVMVVV
Subjt:  MVVGEICSSMGEEEKVKEGEEIG--NSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMVVV

A0A6N2M886 Uncharacterized protein2.4e-0662.96Show/hide
Query:  VVGEICSSMGEEEKVKEGEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMV
        VVG  C+ M    K +  EEI +SM  E M M VVGICSS VEEE  MV   ICSSMVV  MVMV V  CSSMVEEEMVMV
Subjt:  VVGEICSSMGEEEKVKEGEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTGGGGGAGATTTGTAGTAGTATGGGGGAGGAGGAGAAGGTGAAGGAGGGGGAGGAGATTGGTAATAGTATGGCGGAGGAGGTGATGGAGATGGTGGTGGTGGG
GATTTGTAGTAGTATGGTGGAGGAGGAGATGGCGATGGTGGTGGTGGGGATTTGTAGTAGTATGGTGGTGGAGGAGATGGTGATGGTGGTGGTGGGGATTTGTAGTAGTA
TGGTGGAGGAGGAGATGGTAATGGTGGTGGTGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTGGGGGAGATTTGTAGTAGTATGGGGGAGGAGGAGAAGGTGAAGGAGGGGGAGGAGATTGGTAATAGTATGGCGGAGGAGGTGATGGAGATGGTGGTGGTGGG
GATTTGTAGTAGTATGGTGGAGGAGGAGATGGCGATGGTGGTGGTGGGGATTTGTAGTAGTATGGTGGTGGAGGAGATGGTGATGGTGGTGGTGGGGATTTGTAGTAGTA
TGGTGGAGGAGGAGATGGTAATGGTGGTGGTGAGGTGA
Protein sequenceShow/hide protein sequence
MVVGEICSSMGEEEKVKEGEEIGNSMAEEVMEMVVVGICSSMVEEEMAMVVVGICSSMVVEEMVMVVVGICSSMVEEEMVMVVVR