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MS026580 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026580
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold553:1088091..1088438
RNA-Seq ExpressionMS026580
SyntenyMS026580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607070.1 hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia]2.7e-0740.38Show/hide
Query:  MGHSSITGAAMAVA------VLMMMLSTSHCNAASLTSSNFHNET--TVGSIWCGGRAEECLAGE--YELDIQMAISYPPKYASSRVVKPQKPICDRPNS
        MGHSS +GA MA A      V ++MLS SHC+ AS T S++ N T     S+WC GR EEC+  E   E      ++  PK+ S       KP+C+RP  
Subjt:  MGHSSITGAAMAVA------VLMMMLSTSHCNAASLTSSNFHNET--TVGSIWCGGRAEECLAGE--YELDIQMAISYPPKYASSRVVKPQKPICDRPNS

Query:  PYDC
           C
Subjt:  PYDC

KAG6607071.1 hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia]6.0e-0739.13Show/hide
Query:  MGHSSITGAAMAVA---VLMMMLSTSHCNAASLTSSNFHNET--TVGSIWCGGRAEECLAGEYELDIQMAISYPP------KYASSRVVKPQKPICDRPN
        MGHSS +G  MA A   V +++LS S CN AS T S++ N T     S+WC GR EEC+  E +     A ++P       KY S   V   K +C+RP+
Subjt:  MGHSSITGAAMAVA---VLMMMLSTSHCNAASLTSSNFHNET--TVGSIWCGGRAEECLAGEYELDIQMAISYPP------KYASSRVVKPQKPICDRPN

Query:  SPYDCLGP--PNPGP
            C  P   NP P
Subjt:  SPYDCLGP--PNPGP

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACATTCTTCAATCACGGGAGCTGCAATGGCAGTGGCAGTTCTGATGATGATGCTGAGCACAAGCCACTGCAACGCTGCATCTCTGACTTCTTCGAATTTCCACAA
CGAGACCACCGTCGGATCGATATGGTGCGGTGGCCGGGCCGAGGAATGCCTGGCCGGAGAATACGAATTGGACATTCAGATGGCAATTTCATACCCTCCGAAATACGCTT
CTTCACGGGTCGTAAAGCCGCAGAAACCTATATGTGATCGCCCAAATTCACCGTATGACTGTCTTGGCCCGCCCAACCCGGGACCTGGTTGTAGACGCCGCAACATCTTT
GACCGCACAATCTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGACATTCTTCAATCACGGGAGCTGCAATGGCAGTGGCAGTTCTGATGATGATGCTGAGCACAAGCCACTGCAACGCTGCATCTCTGACTTCTTCGAATTTCCACAA
CGAGACCACCGTCGGATCGATATGGTGCGGTGGCCGGGCCGAGGAATGCCTGGCCGGAGAATACGAATTGGACATTCAGATGGCAATTTCATACCCTCCGAAATACGCTT
CTTCACGGGTCGTAAAGCCGCAGAAACCTATATGTGATCGCCCAAATTCACCGTATGACTGTCTTGGCCCGCCCAACCCGGGACCTGGTTGTAGACGCCGCAACATCTTT
GACCGCACAATCTGTTAG
Protein sequenceShow/hide protein sequence
MGHSSITGAAMAVAVLMMMLSTSHCNAASLTSSNFHNETTVGSIWCGGRAEECLAGEYELDIQMAISYPPKYASSRVVKPQKPICDRPNSPYDCLGPPNPGPGCRRRNIF
DRTIC