; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS026671 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026671
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold977:35941..36520
RNA-Seq ExpressionMS026671
SyntenyMS026671
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG51627.1 hypothetical protein EZV62_024151 [Acer yangbiense]7.5e-0635.42Show/hide
Query:  VSSVGNSGGLMLPW-KETDVTIMSNSLGHIDACI-TENDCRWRFTGIYN--------NTMKALEEISSHDKDAFMEKV----------------------
        V  +G SGGLM+ W KE  VT++S S+GHIDA I  E+  RWRF+G+Y         N+ + L  +S  + D F + +                      
Subjt:  VSSVGNSGGLMLPW-KETDVTIMSNSLGHIDACI-TENDCRWRFTGIYN--------NTMKALEEISSHDKDAFMEKV----------------------

Query:  ----ILERLDRFMMNIEMDLLSSSFE---VLHVDFIAFDHRPIL
            I ER+DRF  N   +L    FE   V H+ F + DHRPIL
Subjt:  ----ILERLDRFMMNIEMDLLSSSFE---VLHVDFIAFDHRPIL

TXG53188.1 hypothetical protein EZV62_022357 [Acer yangbiense]1.8e-0748.72Show/hide
Query:  ETKCKNKLEAKVKENSIHYDYCLSVSSVGNSGGLMLPW-KETDVTIMSNSLGHIDACITEND-CRWRFTGIYNNTMKA
        ETK   K  +++KE S+H+    SV S G SGGLML W K+  VTI+S S+GHIDACI  +D  RW F G Y++ + +
Subjt:  ETKCKNKLEAKVKENSIHYDYCLSVSSVGNSGGLMLPW-KETDVTIMSNSLGHIDACITEND-CRWRFTGIYNNTMKA

XP_018816058.1 uncharacterized protein LOC108987582 [Juglans regia]5.8e-0643.02Show/hide
Query:  METKC-KNKLEAKVKENSIHYDYCLSVSSVGNSGGLMLPWKET-DVTIMSNSLGHIDACITENDCR--WRFTGIYNNTMKALEEIS
        METKC KN++E   K   +H+D C++V S G+SGGL L WK T D++I + S  HI A + E   R  W  TG Y +   A  ++S
Subjt:  METKC-KNKLEAKVKENSIHYDYCLSVSSVGNSGGLMLPWKET-DVTIMSNSLGHIDACITENDCR--WRFTGIYNNTMKALEEIS

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.4e-1235.76Show/hide
Query:  ETKCKNKLEAKVKENSIHYDYCLSVSSVGNSGGLMLPW-KETDVTIMSNSLGHIDACITENDCRWRFTGIYNN--------TMKALEEISS---------
        ETK    LE + K   + +D C+SV+S G SGGLML W  +++V I S S GHID+ IT+    WRFTG Y N        + K LE ++          
Subjt:  ETKCKNKLEAKVKENSIHYDYCLSVSSVGNSGGLMLPW-KETDVTIMSNSLGHIDACITENDCRWRFTGIYNN--------TMKALEEISS---------

Query:  ---HDKDAFMEKV--------------ILERLDRFMMNIEMDLLSSSFEVLHVDFIAFDHRPILA
           ++  +  EK+              I ERLDRF++N  M     + +V H++ ++ DHRPILA
Subjt:  ---HDKDAFMEKV--------------ILERLDRFMMNIEMDLLSSSFEVLHVDFIAFDHRPILA

XP_042988712.1 uncharacterized protein LOC122316247 [Carya illinoinensis]6.4e-0549.12Show/hide
Query:  YDYCLSVSSVGNSGGLMLPW-KETDVTIMSNSLGHIDACI--TENDCRWRFTGIYNN
        Y+ C +VSS G SGGL L W +ET++ + S S  HIDA I   E+D +W+FTG+Y +
Subjt:  YDYCLSVSSVGNSGGLMLPW-KETDVTIMSNSLGHIDACI--TENDCRWRFTGIYNN

TrEMBL top hitse value%identityAlignment
A0A2I4E9H8 uncharacterized protein LOC1089875822.8e-0643.02Show/hide
Query:  METKC-KNKLEAKVKENSIHYDYCLSVSSVGNSGGLMLPWKET-DVTIMSNSLGHIDACITENDCR--WRFTGIYNNTMKALEEIS
        METKC KN++E   K   +H+D C++V S G+SGGL L WK T D++I + S  HI A + E   R  W  TG Y +   A  ++S
Subjt:  METKC-KNKLEAKVKENSIHYDYCLSVSSVGNSGGLMLPWKET-DVTIMSNSLGHIDACITENDCR--WRFTGIYNNTMKALEEIS

A0A5C7H3Y3 CCHC-type domain-containing protein3.6e-0635.42Show/hide
Query:  VSSVGNSGGLMLPW-KETDVTIMSNSLGHIDACI-TENDCRWRFTGIYN--------NTMKALEEISSHDKDAFMEKV----------------------
        V  +G SGGLM+ W KE  VT++S S+GHIDA I  E+  RWRF+G+Y         N+ + L  +S  + D F + +                      
Subjt:  VSSVGNSGGLMLPW-KETDVTIMSNSLGHIDACI-TENDCRWRFTGIYN--------NTMKALEEISSHDKDAFMEKV----------------------

Query:  ----ILERLDRFMMNIEMDLLSSSFE---VLHVDFIAFDHRPIL
            I ER+DRF  N   +L    FE   V H+ F + DHRPIL
Subjt:  ----ILERLDRFMMNIEMDLLSSSFE---VLHVDFIAFDHRPIL

A0A5C7H853 CCHC-type domain-containing protein8.7e-0848.72Show/hide
Query:  ETKCKNKLEAKVKENSIHYDYCLSVSSVGNSGGLMLPW-KETDVTIMSNSLGHIDACITEND-CRWRFTGIYNNTMKA
        ETK   K  +++KE S+H+    SV S G SGGLML W K+  VTI+S S+GHIDACI  +D  RW F G Y++ + +
Subjt:  ETKCKNKLEAKVKENSIHYDYCLSVSSVGNSGGLMLPW-KETDVTIMSNSLGHIDACITEND-CRWRFTGIYNNTMKA

A0A6J1DUG8 uncharacterized protein LOC1110241356.8e-1335.76Show/hide
Query:  ETKCKNKLEAKVKENSIHYDYCLSVSSVGNSGGLMLPW-KETDVTIMSNSLGHIDACITENDCRWRFTGIYNN--------TMKALEEISS---------
        ETK    LE + K   + +D C+SV+S G SGGLML W  +++V I S S GHID+ IT+    WRFTG Y N        + K LE ++          
Subjt:  ETKCKNKLEAKVKENSIHYDYCLSVSSVGNSGGLMLPW-KETDVTIMSNSLGHIDACITENDCRWRFTGIYNN--------TMKALEEISS---------

Query:  ---HDKDAFMEKV--------------ILERLDRFMMNIEMDLLSSSFEVLHVDFIAFDHRPILA
           ++  +  EK+              I ERLDRF++N  M     + +V H++ ++ DHRPILA
Subjt:  ---HDKDAFMEKV--------------ILERLDRFMMNIEMDLLSSSFEVLHVDFIAFDHRPILA

A0A803PUH4 Uncharacterized protein3.6e-0630.82Show/hide
Query:  KLEAKVKENSIHYDYCLSVSSVGNSGGLMLPWKE-TDVTIMSNSLGHIDACITENDCR-WRFTGIY----NNTMKALEEISSHDKDAFM-----------
        K +A+    S+ YD C  V + G SGGL+L W    D  IMS S  HID+ I + + + WRFTG Y    N  ++  E++    K  ++           
Subjt:  KLEAKVKENSIHYDYCLSVSSVGNSGGLMLPWKE-TDVTIMSNSLGHIDACITENDCR-WRFTGIY----NNTMKALEEISSHDKDAFM-----------

Query:  -------------------EKVILERLDRFMMNIEMDLLSSSFEVLHVDFIAFDHRPIL
                            ++I ERLDR   N E   L    +V H+D ++ DH PIL
Subjt:  -------------------EKVILERLDRFMMNIEMDLLSSSFEVLHVDFIAFDHRPIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACCAAGTGTAAGAACAAGTTAGAAGCAAAAGTTAAAGAGAATTCTATCCACTATGACTATTGCTTAAGTGTCTCAAGTGTGGGAAATAGCGGTGGATTGATGTT
ACCTTGGAAGGAGACAGATGTTACAATTATGTCTAACTCTTTGGGACATATTGATGCTTGCATCACAGAGAATGATTGTAGATGGAGATTTACTGGGATCTACAACAATA
CTATGAAGGCTTTAGAGGAGATATCTTCACATGACAAAGACGCCTTCATGGAGAAGGTCATTTTAGAACGACTAGATCGGTTTATGATGAATATTGAGATGGATCTTCTA
AGTTCCTCATTTGAGGTACTTCACGTGGATTTCATAGCTTTTGATCATAGACCTATTTTAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACCAAGTGTAAGAACAAGTTAGAAGCAAAAGTTAAAGAGAATTCTATCCACTATGACTATTGCTTAAGTGTCTCAAGTGTGGGAAATAGCGGTGGATTGATGTT
ACCTTGGAAGGAGACAGATGTTACAATTATGTCTAACTCTTTGGGACATATTGATGCTTGCATCACAGAGAATGATTGTAGATGGAGATTTACTGGGATCTACAACAATA
CTATGAAGGCTTTAGAGGAGATATCTTCACATGACAAAGACGCCTTCATGGAGAAGGTCATTTTAGAACGACTAGATCGGTTTATGATGAATATTGAGATGGATCTTCTA
AGTTCCTCATTTGAGGTACTTCACGTGGATTTCATAGCTTTTGATCATAGACCTATTTTAGCTTAA
Protein sequenceShow/hide protein sequence
METKCKNKLEAKVKENSIHYDYCLSVSSVGNSGGLMLPWKETDVTIMSNSLGHIDACITENDCRWRFTGIYNNTMKALEEISSHDKDAFMEKVILERLDRFMMNIEMDLL
SSSFEVLHVDFIAFDHRPILA