CuGenDBv2

Gene ID	MS026708
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DNL-type domain-containing protein
Genome location	scaffold2:2340788..2346200
RNA-Seq Expression	MS026708
Synteny	MS026708
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0030150 - protein import into mitochondrial matrix (biological process) GO:0050821 - protein stabilization (biological process) GO:0005739 - mitochondrion (cellular component) GO:0008270 - zinc ion binding (molecular function) GO:0051087 - chaperone binding (molecular function)
InterPro domains	IPR007853 - Zinc finger, DNL-type IPR024158 - Mitochondrial import protein TIM15

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601335.1 DNL-type zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]

3.0e-71

81.76

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Query:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP
        M AAKTL+ SSPALLQ S NSSQ  P+PSI+AFRPI+SSKANPSND FIRSR+F TAPV RE R KV  VSRLVDGNSG+D++SA+RNSD GAAIDIKLP
Subjt:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP

Query:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        RRSLLV FTCNQC  RTKR+INRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFRE+D+DV+SNSDQV
Subjt:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

KAG7032119.1 DNL-type zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma]

8.1e-69

80.59

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Query:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP
        M AAKTL  SSPALLQ S N SQ  P+PSI AFRPI+SSKANPSN  FIRSR F TAPV RE R KV  VSRLVDGNSG+D++SA+RNSD GAAIDIKLP
Subjt:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP

Query:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        RRSLLV FTCNQC  RTKR+INRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFRE+D+DV+SNSDQV
Subjt:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

XP_022149076.1 uncharacterized protein LOC111017577 [Momordica charantia]

1.4e-89

98.82

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Query:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP
        MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIK P
Subjt:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP

Query:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDF+EEDMDVDSNSDQV
Subjt:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

XP_023511593.1 DNL-type zinc finger protein isoform X1 [Cucurbita pepo subsp. pepo]

2.8e-69

80.59

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Query:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP
        M AAKTL  SSPALLQ S N SQ  P+PSI+AFRPI+SSKANPSN  FIRSR+F TAPV RE R KV  VSRLVDGNSG D++SA+RNSD GAAIDIKLP
Subjt:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP

Query:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        RRSLLV FTCNQC  RTKR+INRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFRE+D+DV+SNSDQV
Subjt:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

XP_038891803.1 uncharacterized protein C24H6.02c [Benincasa hispida]

4.0e-68

78.24

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Query:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP
        M AAKT++ SSPALL HS NSS+  P  SI +F+ I+ SKANPSN VFIRSRNF T PV RERRYKV  VSRLVDG  G+D++SA+RNSD  AAIDIKLP
Subjt:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP

Query:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        RRSL+V FTCNQC+ RTKR+INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMD+DSNSDQV
Subjt:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KR03 DNL-type domain-containing protein

2.5e-68

77.65

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Query:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP
        M AA T+  SSP LLQHS N SQ  P+PSI +F+PI+SSKANPSN VFIRSRNF TAPV RERRYKV  VS LVDG +G+D++ ++RNSD GAAIDIKLP
Subjt:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP

Query:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        RRSL+V FTCNQC+ RTKR+INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED+D+DS+SDQV
Subjt:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

A0A5A7SVJ1 Mitochondrial protein import protein ZIM17 isoform X2

4.3e-68

77.65

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Query:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP
        M AAKT+  SSP LL H  N SQ  P+PSI +F+PI+SSKANPSN VFIRSRNF TAPV R RRYKV  VS LVDG +G+D++S++RNSD GAAIDIKLP
Subjt:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP

Query:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        RRSL+V FTCNQC+ RTKR+INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED D+DSNSDQV
Subjt:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

A0A6J1D799 uncharacterized protein LOC111017577

6.9e-90

98.82

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Query:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP
        MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIK P
Subjt:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP

Query:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDF+EEDMDVDSNSDQV
Subjt:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

A0A6J1GZ90 uncharacterized protein LOC111458229 isoform X1

1.9e-68

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Query:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP
        M AAKT   SSPALLQ S N SQ  P+PSI AFRPI+SSKANPSN  FIRSR F TAPV RE R KV  VSRLVDGNSG+D++SA+RNSD GAAIDIKLP
Subjt:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP

Query:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        RRSLLV FTCNQC  RTKR+INRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFRE+D+DV+SNSDQV
Subjt:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

A0A6J1J9C7 DNL-type zinc finger protein isoform X1

3.3e-68

78.82

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Query:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP
        M AAKTL  SSPALLQ S N SQ  P+PSI+AFRPI+SSKANPSN  FI SR+F TAPV RE R KV  VSRLVDG+SG+D++SA+RNSD GAAIDIKLP
Subjt:  MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLP

Query:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        RRSLLV FTCNQC  RTKR+INRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFR++D+DV+SNSDQV
Subjt:  RRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

SwissProt top hits

e value

%identity

Alignment

A1L1P7 DNL-type zinc finger protein

2.3e-05

43.9

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Query:  FTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNL
        +TC  C+ R+ + I++LAY +G+V V C GC+ +H + DNL
Subjt:  FTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNL

Q0IH40 DNL-type zinc finger protein

3.5e-06

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Query:  FTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFR
        +TC  C  R+ + I+++AY +G+V V+C GC+ +H + DNLG   + + R
Subjt:  FTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFR

Q5SXM8 DNL-type zinc finger protein

2.0e-06

47.62

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Query:  FTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLG
        +TC  C  R+ + I++LAY +G+V V C GCQ +H + DNLG
Subjt:  FTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLG

Q9D113 DNL-type zinc finger protein

1.3e-05

46.34

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Query:  FTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNL
        +TC  C  R+ + I++LAY +G+V V C GCQ +H + DNL
Subjt:  FTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNL

Arabidopsis top hits

e value

%identity

Alignment

AT1G68730.1 Zim17-type zinc finger protein

1.3e-29

59.63

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Query:  PVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLPRRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFR
        P  R R + VF    L D +  N ++ +  ++++ A+IDIKLPRRSL VEFTCN C  RTKR+INR AYE+GLVFVQCAGC K+HKLVDNLGLIVEYDFR
Subjt:  PVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLPRRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFR

Query:  EEDMDVDSN
        E   D+ ++
Subjt:  EEDMDVDSN

AT3G54826.1 Zim17-type zinc finger protein

5.5e-07

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Query:  PRRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLG
        PR   ++ FTC  C+ R+ ++ +R +YE G+V V+C GC   H + D  G
Subjt:  PRRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLG

AT5G27280.1 Zim17-type zinc finger protein

3.0e-13

57.63

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Query:  KLPRRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDF
        K PRR + V FTCN C  RT R IN  AY  G VFVQC GC  +HKLVDNL L  E  +
Subjt:  KLPRRSLLVEFTCNQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDF

Sequences

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CDS sequence

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ATGACAGCGGCAAAAACTCTGTTCGTTTCCTCTCCCGCGCTTCTTCAGCACTCCTTGAACTCTTCTCAGATTTGGCCGTACCCTTCTATAAGGGCATTCAGACCTATTAT
CTCTTCGAAAGCAAACCCTAGCAATGACGTCTTCATTAGGAGTAGGAACTTCCATACAGCACCAGTTATTCGGGAACGCAGATACAAGGTGTTTGCGGTTTCTAGATTGG
TGGATGGTAATTCTGGCAACGACAATGATTCTGCACGCAGAAATTCGGATATGGGGGCAGCCATTGACATAAAGCTTCCAAGAAGAAGTTTGCTGGTGGAATTTACATGT
AACCAATGTAATGGGAGGACAAAGAGGATTATAAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAATGTGCAGGTTGTCAAAAGTATCACAAACTGGTCGACAA
TCTTGGCCTCATAGTAGAGTATGACTTCCGGGAGGAAGACATGGATGTGGACTCGAATTCAGATCAAGTTTGA

mRNA sequence

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Protein sequence

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MTAAKTLFVSSPALLQHSLNSSQIWPYPSIRAFRPIISSKANPSNDVFIRSRNFHTAPVIRERRYKVFAVSRLVDGNSGNDNDSARRNSDMGAAIDIKLPRRSLLVEFTC
NQCNGRTKRIINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

MS026708 (gene) of Bitter gourd (TR) v1 genome