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MS026774 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026774
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibonuclease H
Genome locationscaffold300:88834..92222
RNA-Seq ExpressionMS026774
SyntenyMS026774
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136647.1 uncharacterized protein LOC111008302 [Momordica charantia]6.5e-1284.78Show/hide
Query:  LNYVETSLSGPTDASKTILAEKLVNNGLKGLIGYCRDDSCRDPDKE
        L+YV+TSLSGPTDASKTI  EKLVNNGL GLIGYCRDD  RDPDKE
Subjt:  LNYVETSLSGPTDASKTILAEKLVNNGLKGLIGYCRDDSCRDPDKE
TrEMBL top hitse value%identityAlignment
A0A6J1C617 Ribonuclease H3.1e-1284.78Show/hide
Query:  LNYVETSLSGPTDASKTILAEKLVNNGLKGLIGYCRDDSCRDPDKE
        L+YV+TSLSGPTDASKTI  EKLVNNGL GLIGYCRDD  RDPDKE
Subjt:  LNYVETSLSGPTDASKTILAEKLVNNGLKGLIGYCRDDSCRDPDKE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGTTCGCTCTCTGGCTCCATCTTCTTTGGCGCGGGTTCGATACTGCTCGTGGCCGTCGCCGTCCGCTACAGAGGGAGAGAGCGCAAGCGACCAACGAGCTTAAA
ACGCCAACTGGGTACAACCGGGAGATTCCTGCCGCTTAACTATGTCGAAACTAGCTTATCGGGCCCAACGGACGCCTCTAAGACCATTCTTGCCGAGAAACTAGTCAATA
ACGGGCTAAAAGGCCTTATCGGGTACTGCCGGGATGATTCCTGCCGAGATCCGGACAAGGAACGACTAAACTTGGCAACCGGGATGAGTCTTACCGCTTACCGGGCCAAG
ACTAGCTTTTTCTCACTTACCGAGTGCCAACCGCATACCGTACCACATAACGGCCCCTATGTGCAACCTCCAGCCCATGGGACGAGGCGCAATGCCGGCACACCCATGTC
GTCCGACACTGTCCTTGAGATTCTCATTCTCAAAGGAAAACGCCCAAGACTTTGGTCTTGCAATGCTCGCCCACGCCATGACACACGCATGTGCCATGGGATAGCTCACT
TAGGCCACAGGGCCCAGGGGTGGTGGAGAGCTGACACCATACCTTCCCTAAGGTACATTCTAAGGCATTCTTGGTCTGGCATGCGTGTACATGCAAAGTGTCGGTCGTCC
AAACTCTCGACGGAACCCTTACTTCTAGGGTTATGGCCTATGGCCCCAACTGGCCCCGCTGAGCTTGTCACCGACACCACTGACATCGCCTTCACCTTCCATTCTGCATA
TGCCTTCTCTAGGCATCTTGAGTACATCCATGGGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGTTCGCTCTCTGGCTCCATCTTCTTTGGCGCGGGTTCGATACTGCTCGTGGCCGTCGCCGTCCGCTACAGAGGGAGAGAGCGCAAGCGACCAACGAGCTTAAA
ACGCCAACTGGGTACAACCGGGAGATTCCTGCCGCTTAACTATGTCGAAACTAGCTTATCGGGCCCAACGGACGCCTCTAAGACCATTCTTGCCGAGAAACTAGTCAATA
ACGGGCTAAAAGGCCTTATCGGGTACTGCCGGGATGATTCCTGCCGAGATCCGGACAAGGAACGACTAAACTTGGCAACCGGGATGAGTCTTACCGCTTACCGGGCCAAG
ACTAGCTTTTTCTCACTTACCGAGTGCCAACCGCATACCGTACCACATAACGGCCCCTATGTGCAACCTCCAGCCCATGGGACGAGGCGCAATGCCGGCACACCCATGTC
GTCCGACACTGTCCTTGAGATTCTCATTCTCAAAGGAAAACGCCCAAGACTTTGGTCTTGCAATGCTCGCCCACGCCATGACACACGCATGTGCCATGGGATAGCTCACT
TAGGCCACAGGGCCCAGGGGTGGTGGAGAGCTGACACCATACCTTCCCTAAGGTACATTCTAAGGCATTCTTGGTCTGGCATGCGTGTACATGCAAAGTGTCGGTCGTCC
AAACTCTCGACGGAACCCTTACTTCTAGGGTTATGGCCTATGGCCCCAACTGGCCCCGCTGAGCTTGTCACCGACACCACTGACATCGCCTTCACCTTCCATTCTGCATA
TGCCTTCTCTAGGCATCTTGAGTACATCCATGGGGTGTGA
Protein sequenceShow/hide protein sequence
MSGSLSGSIFFGAGSILLVAVAVRYRGRERKRPTSLKRQLGTTGRFLPLNYVETSLSGPTDASKTILAEKLVNNGLKGLIGYCRDDSCRDPDKERLNLATGMSLTAYRAK
TSFFSLTECQPHTVPHNGPYVQPPAHGTRRNAGTPMSSDTVLEILILKGKRPRLWSCNARPRHDTRMCHGIAHLGHRAQGWWRADTIPSLRYILRHSWSGMRVHAKCRSS
KLSTEPLLLGLWPMAPTGPAELVTDTTDIAFTFHSAYAFSRHLEYIHGV