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MS026831 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026831
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionchalcone synthase-like
Genome locationscaffold983:570019..570360
RNA-Seq ExpressionMS026831
SyntenyMS026831
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0030639 - polyketide biosynthetic process (biological process)
GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups (molecular function)
InterPro domainsIPR011141 - Polyketide synthase, type III
IPR012328 - Chalcone/stilbene synthase, C-terminal
IPR016039 - Thiolase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY52068.1 hypothetical protein CUMW_139120, partial [Citrus unshiu]3.1e-3263.72Show/hide
Query:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG
        +EK L DA+ P G  I D+NSLFY++HPGGRAI+D++E NLGL   KL A RHVL EY NMGG SV F+LDEIRKKS++E   TTG+GLEWG L   GPG
Subjt:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG

Query:  ITVETLMLRSVPM
        +TVET++L SVP+
Subjt:  ITVETLMLRSVPM

XP_004292734.1 PREDICTED: 4-hydroxycoumarin synthase 1-like [Fragaria vesca subsp. vesca]4.8e-3361.26Show/hide
Query:  MEKCLADALPTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGI
        +E+CL+       V  D+NSLFY+IHPGG AI+D++E+ LGL  GKL A RHVL E+ NMG PSV+F+LDE+RKKS+ EG +TTGEGLEWG L+  GPG+
Subjt:  MEKCLADALPTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGI

Query:  TVETLMLRSVP
        TVET++LRS P
Subjt:  TVETLMLRSVP

XP_006434306.1 chalcone synthase [Citrus clementina]3.1e-3263.72Show/hide
Query:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG
        +EK L DA+ P G  I D+NSLFY++HPGGRAI+D++E NLGL   KL A RHVL EY NMGG SV F+LDEIRKKS++E   TTG+GLEWG L   GPG
Subjt:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG

Query:  ITVETLMLRSVPM
        +TVET++L SVP+
Subjt:  ITVETLMLRSVPM

XP_006473029.1 chalcone synthase-like [Citrus sinensis]1.8e-3263.72Show/hide
Query:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG
        +EK L DA+ P G  I D+NSLFY++HPGGRAI+D++E NLGL   KL A RHVL EY NMGG SV F+LDEIRKKS++E  +TTG+GLEWG L   GPG
Subjt:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG

Query:  ITVETLMLRSVPM
        +TVET++L SVP+
Subjt:  ITVETLMLRSVPM

XP_022141572.1 chalcone synthase-like [Momordica charantia]5.6e-3466.37Show/hide
Query:  MEKCLADALPTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGI
        +EKCLA A        DYNSLFY IHPGGRAI+DEIE+NLGL   KLE+ R VL EY NMGGP+VVFVLDE+R KSIR+G STTG G + G L+ FGPG+
Subjt:  MEKCLADALPTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGI

Query:  TVETLMLRSVPMV
        T+ETL+L+SVP+V
Subjt:  TVETLMLRSVPMV

TrEMBL top hitse value%identityAlignment
A0A2H5PI80 Uncharacterized protein (Fragment)1.5e-3263.72Show/hide
Query:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG
        +EK L DA+ P G  I D+NSLFY++HPGGRAI+D++E NLGL   KL A RHVL EY NMGG SV F+LDEIRKKS++E   TTG+GLEWG L   GPG
Subjt:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG

Query:  ITVETLMLRSVPM
        +TVET++L SVP+
Subjt:  ITVETLMLRSVPM

A0A6J1CK67 chalcone synthase-like2.7e-3466.37Show/hide
Query:  MEKCLADALPTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGI
        +EKCLA A        DYNSLFY IHPGGRAI+DEIE+NLGL   KLE+ R VL EY NMGGP+VVFVLDE+R KSIR+G STTG G + G L+ FGPG+
Subjt:  MEKCLADALPTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGI

Query:  TVETLMLRSVPMV
        T+ETL+L+SVP+V
Subjt:  TVETLMLRSVPMV

U3KRF1 Type III polyketide synthase quinolone synthase1.5e-3263.72Show/hide
Query:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG
        +EK L DA+ P G  I D+NSLFY++HPGGRAI+D++E NLGL   KL A RHVL EY NMGG SV F+LDEIRKKS++E   TTG+GLEWG L   GPG
Subjt:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG

Query:  ITVETLMLRSVPM
        +TVET++L SVP+
Subjt:  ITVETLMLRSVPM

U6C889 Quinolone synthase1.5e-3263.72Show/hide
Query:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG
        +EK L DA+ P G  I D+NSLFY++HPGGRAI+D++E NLGL   KL A RHVL EY NMGG SV F+LDEIRKKS++E   TTG+GLEWG L   GPG
Subjt:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG

Query:  ITVETLMLRSVPM
        +TVET++L SVP+
Subjt:  ITVETLMLRSVPM

V4TCZ9 Uncharacterized protein1.5e-3263.72Show/hide
Query:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG
        +EK L DA+ P G  I D+NSLFY++HPGGRAI+D++E NLGL   KL A RHVL EY NMGG SV F+LDEIRKKS++E   TTG+GLEWG L   GPG
Subjt:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG

Query:  ITVETLMLRSVPM
        +TVET++L SVP+
Subjt:  ITVETLMLRSVPM

SwissProt top hitse value%identityAlignment
D2DRC4 4-hydroxycoumarin synthase 12.9e-3367.74Show/hide
Query:  DYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITVETLMLRS
        D+NSLF+++HPGG AIVD++E+ LGL  GKL A RHVL EY NMG PSV F+LDE+RKKSI EG +TTGEGLEWG ++  GPG+TVET +LRS
Subjt:  DYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITVETLMLRS

D2DRC5 4-hydroxycoumarin synthase 22.5e-3265.59Show/hide
Query:  DYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITVETLMLRS
        D+NSLF+++HPGG AIVD++E+ LGL  GKL A RHVL EY NMG P+V F+LDE+R KSI EG +TTGEGLEWG ++  GPG+TVET +LRS
Subjt:  DYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITVETLMLRS

P51070 Stilbene synthase 23.5e-3157.02Show/hide
Query:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG
        +EKCL  A  P G  I D+NSLF+  HPGG AI+D +E  L L   KLEA RHVL EY NM    V+F+LDE+RKKS++   +TTGEGL+WG L  FGPG
Subjt:  MEKCLADAL-PTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPG

Query:  ITVETLMLRSVPMV
        +T+ET++L S+PMV
Subjt:  ITVETLMLRSVPMV

P53416 Bibenzyl synthase2.7e-3158.18Show/hide
Query:  KCLADALPTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITV
        KCL +A  T   I D+NS+F+  HPGGRAI+D++E+ +GL   KL   RHVL EY NM    V F LDE+RK+S  EG +TTGEGLEWG L  FGPG+TV
Subjt:  KCLADALPTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITV

Query:  ETLMLRSVPM
        ET++LRSVP+
Subjt:  ETLMLRSVPM

Q27Z07 3,5-dihydroxybiphenyl synthase2.9e-3367.74Show/hide
Query:  DYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITVETLMLRS
        D+NSLF+++HPGG AIVD++E+ LGL  GKL A RHVL EY NMG PSV F+LD++RKKSI EG STTGEGLEWG ++  GPG+TVET +LRS
Subjt:  DYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITVETLMLRS

Arabidopsis top hitse value%identityAlignment
AT1G02050.1 Chalcone and stilbene synthase family protein4.3e-1638.3Show/hide
Query:  DYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITVETLMLRSV
        ++N +F+A+HPGG AI++ +E  L L   KLE+ R  L +Y N+   ++++V++ +R +  ++G++      EWG  L FGPGIT E L++RS+
Subjt:  DYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITVETLMLRSV

AT4G00040.1 Chalcone and stilbene synthase family protein7.4e-1639.36Show/hide
Query:  DYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITVETLMLRSV
        + N LF+A+HPGG AI+  +E  L L   KLE  R  L +Y N+   ++ +++D++R +  ++G     EG EWG  L FGPGIT E  ++R++
Subjt:  DYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITVETLMLRSV

AT4G34520.1 3-ketoacyl-CoA synthase 182.1e-0735.8Show/hide
Query:  IPDYNSL--FYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKS-IREGNSTTGEGLEWGF
        +PD+      + IH GGRA++DE+E+NLGL    +EA R  L  + N    S+ + L  I  K  +++GN      L  GF
Subjt:  IPDYNSL--FYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKS-IREGNSTTGEGLEWGF

AT4G34850.1 Chalcone and stilbene synthase family protein1.1e-1639.39Show/hide
Query:  GMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITVETLMLRSV
        G+   +YN +F+A+HPGG AI++ IE+ L L   KL   R  L +Y N    S+V+VL+ + ++S +  N    E  EWG +L FGPG+T E ++ R++
Subjt:  GMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITVETLMLRSV

AT5G13930.1 Chalcone and stilbene synthase family protein1.4e-3059.18Show/hide
Query:  IPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITVETLMLRSVPM
        I D+NSLF+  HPGG AI+D++E  LGL   K+ A RHVL EY NM    V+F+LDE+R+KS ++G +TTGEGLEWG L  FGPG+TVET++L SVP+
Subjt:  IPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITVETLMLRSVPM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAATGCTTGGCTGATGCACTCCCAACTGGGATGGTAATTCCTGACTATAACTCATTATTTTACGCAATCCATCCGGGGGGTCGAGCCATTGTTGATGAAATTGA
GCAGAATCTTGGGCTTCCAAATGGGAAGTTGGAAGCCTGCAGGCACGTGCTGGGTGAGTATGAGAACATGGGAGGCCCGAGTGTGGTGTTTGTTTTGGATGAGATAAGGA
AGAAGTCGATCCGTGAAGGGAACAGCACTACTGGTGAAGGATTAGAATGGGGGTTTCTTCTTACTTTTGGGCCTGGTATCACAGTTGAGACTCTAATGTTGCGCAGTGTT
CCCATGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAATGCTTGGCTGATGCACTCCCAACTGGGATGGTAATTCCTGACTATAACTCATTATTTTACGCAATCCATCCGGGGGGTCGAGCCATTGTTGATGAAATTGA
GCAGAATCTTGGGCTTCCAAATGGGAAGTTGGAAGCCTGCAGGCACGTGCTGGGTGAGTATGAGAACATGGGAGGCCCGAGTGTGGTGTTTGTTTTGGATGAGATAAGGA
AGAAGTCGATCCGTGAAGGGAACAGCACTACTGGTGAAGGATTAGAATGGGGGTTTCTTCTTACTTTTGGGCCTGGTATCACAGTTGAGACTCTAATGTTGCGCAGTGTT
CCCATGGTTTGA
Protein sequenceShow/hide protein sequence
MEKCLADALPTGMVIPDYNSLFYAIHPGGRAIVDEIEQNLGLPNGKLEACRHVLGEYENMGGPSVVFVLDEIRKKSIREGNSTTGEGLEWGFLLTFGPGITVETLMLRSV
PMV