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MS026839 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026839
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMuDRA-like transposase
Genome locationscaffold277:53745..54470
RNA-Seq ExpressionMS026839
SyntenyMS026839
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058306.1 MuDRA-like transposase [Cucumis melo var. makuwa]8.8e-0633.86Show/hide
Query:  GLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPLCV-----SNRKKHMVVVANEEIYHFILRPK
        G+DV + IT  DL + LY L ++DP +F+I I CIY+ +++ EV  F + +D  LKFY+    +P +VPL V     SN+ K ++     + Y+ +    
Subjt:  GLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPLCV-----SNRKKHMVVVANEEIYHFILRPK

Query:  YISSSFPYFPGDDEPPHYGELYENEVD
         + +  P+      P     L ENEVD
Subjt:  YISSSFPYFPGDDEPPHYGELYENEVD

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]3.0e-2237.72Show/hide
Query:  MGGLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPL----------CVSNRKKHMVVVANEEIY
        MGGL+VDE ITY DLV+A++R+TRI+PD FNIV++CIYKF+ QY V  F+IFDD SL FYL  PP PSQVPL          C  +    + +    E +
Subjt:  MGGLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPL----------CVSNRKKHMVVVANEEIY

Query:  --------------------HFILRPKYISSSFPYFP-----------GDDEPPHYGELYENEVDYKIENEAEYKFLEDNTEDEDDQVEYEYEGEHGYDN
                            H  +R  +  SS  +             GDDE  H+G+      D   + + EY+ + D+ ED+DD  E E E     DN
Subjt:  --------------------HFILRPKYISSSFPYFP-----------GDDEPPHYGELYENEVDYKIENEAEYKFLEDNTEDEDDQVEYEYEGEHGYDN

Query:  ENEDEINDQHENGVELVYEVHSVSANAP
        E ++ + D   +    V EV SVS NAP
Subjt:  ENEDEINDQHENGVELVYEVHSVSANAP

XP_022154930.1 uncharacterized protein LOC111022077 [Momordica charantia]1.3e-1260.67Show/hide
Query:  DDEPPHYGELYENEVDYKIENEAEYKFLEDN----TEDEDDQVEYEYEGEHGYDNENEDEINDQHENGV-------ELVYEVHSVSANA
        DD+PP+Y ELYENEV+Y I NE EY   ED+     EDEDDQ E E+EGEHG+DN N+DEINDQ +NG        E V+EV SVSANA
Subjt:  DDEPPHYGELYENEVDYKIENEAEYKFLEDN----TEDEDDQVEYEYEGEHGYDNENEDEINDQHENGV-------ELVYEVHSVSANA

XP_022156802.1 uncharacterized protein LOC111023635 [Momordica charantia]8.2e-1234.18Show/hide
Query:  MGGLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPLCVSNRKKHMVVVANEEIYHFILRPKYIS
        MGGLDVDE ITY +LV+AL+ LTRID DQF+++++C+Y   + +E++                       PL  +      V+  N              
Subjt:  MGGLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPLCVSNRKKHMVVVANEEIYHFILRPKYIS

Query:  SSFPYFPGDDEPPHYGELYENEVDYKIENEAEYKFLEDNTED--EDDQVEYEYEGEHGYDNENEDE------INDQHENGVELVYEVHSVSANAPY
                D+     G+LYENEV+Y+ +++ EY + E  TED  EDD       G +GYDN  EDE      +++ +EN  + V+E H+VS NAPY
Subjt:  SSFPYFPGDDEPPHYGELYENEVDYKIENEAEYKFLEDNTED--EDDQVEYEYEGEHGYDNENEDE------INDQHENGVELVYEVHSVSANAPY

XP_022156834.1 uncharacterized protein LOC111023667 [Momordica charantia]5.3e-3542.13Show/hide
Query:  MGGLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPLCVSNRKKHMVVVANEEIYHFILRPKYIS
        MGGLDVDE ITY +LV+AL+ LTRIDPDQF+++++C+Y+F  +YEV  + IFDD SLKFYLN PPDPSQVPL V+   K      +    +F       S
Subjt:  MGGLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPLCVSNRKKHMVVVANEEIYHFILRPKYIS

Query:  SSFPYFP-----------------------------------------GDDEPPHYGELYENEVDYKIENEAEYKFLEDNTEDEDDQVEYEYEGEHGYDN
        SSFPY+P                                          DDE P+YG+LYENEV+YK +++ EY + E  TED       E +G +GYDN
Subjt:  SSFPYFP-----------------------------------------GDDEPPHYGELYENEVDYKIENEAEYKFLEDNTEDEDDQVEYEYEGEHGYDN

Query:  ENEDE------INDQHENGVELVYEVHSVSANAPY
          EDE      +++ +EN  + V+E H++S NAPY
Subjt:  ENEDE------INDQHENGVELVYEVHSVSANAPY

TrEMBL top hitse value%identityAlignment
A0A5A7UVW4 MuDRA-like transposase4.3e-0633.86Show/hide
Query:  GLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPLCV-----SNRKKHMVVVANEEIYHFILRPK
        G+DV + IT  DL + LY L ++DP +F+I I CIY+ +++ EV  F + +D  LKFY+    +P +VPL V     SN+ K ++     + Y+ +    
Subjt:  GLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPLCV-----SNRKKHMVVVANEEIYHFILRPK

Query:  YISSSFPYFPGDDEPPHYGELYENEVD
         + +  P+      P     L ENEVD
Subjt:  YISSSFPYFPGDDEPPHYGELYENEVD

A0A6J1DL12 uncharacterized protein LOC1110220776.1e-1360.67Show/hide
Query:  DDEPPHYGELYENEVDYKIENEAEYKFLEDN----TEDEDDQVEYEYEGEHGYDNENEDEINDQHENGV-------ELVYEVHSVSANA
        DD+PP+Y ELYENEV+Y I NE EY   ED+     EDEDDQ E E+EGEHG+DN N+DEINDQ +NG        E V+EV SVSANA
Subjt:  DDEPPHYGELYENEVDYKIENEAEYKFLEDN----TEDEDDQVEYEYEGEHGYDNENEDEINDQHENGV-------ELVYEVHSVSANA

A0A6J1DLB0 uncharacterized protein LOC1110219691.5e-2237.72Show/hide
Query:  MGGLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPL----------CVSNRKKHMVVVANEEIY
        MGGL+VDE ITY DLV+A++R+TRI+PD FNIV++CIYKF+ QY V  F+IFDD SL FYL  PP PSQVPL          C  +    + +    E +
Subjt:  MGGLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPL----------CVSNRKKHMVVVANEEIY

Query:  --------------------HFILRPKYISSSFPYFP-----------GDDEPPHYGELYENEVDYKIENEAEYKFLEDNTEDEDDQVEYEYEGEHGYDN
                            H  +R  +  SS  +             GDDE  H+G+      D   + + EY+ + D+ ED+DD  E E E     DN
Subjt:  --------------------HFILRPKYISSSFPYFP-----------GDDEPPHYGELYENEVDYKIENEAEYKFLEDNTEDEDDQVEYEYEGEHGYDN

Query:  ENEDEINDQHENGVELVYEVHSVSANAP
        E ++ + D   +    V EV SVS NAP
Subjt:  ENEDEINDQHENGVELVYEVHSVSANAP

A0A6J1DSY0 uncharacterized protein LOC1110236354.0e-1234.18Show/hide
Query:  MGGLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPLCVSNRKKHMVVVANEEIYHFILRPKYIS
        MGGLDVDE ITY +LV+AL+ LTRID DQF+++++C+Y   + +E++                       PL  +      V+  N              
Subjt:  MGGLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPLCVSNRKKHMVVVANEEIYHFILRPKYIS

Query:  SSFPYFPGDDEPPHYGELYENEVDYKIENEAEYKFLEDNTED--EDDQVEYEYEGEHGYDNENEDE------INDQHENGVELVYEVHSVSANAPY
                D+     G+LYENEV+Y+ +++ EY + E  TED  EDD       G +GYDN  EDE      +++ +EN  + V+E H+VS NAPY
Subjt:  SSFPYFPGDDEPPHYGELYENEVDYKIENEAEYKFLEDNTED--EDDQVEYEYEGEHGYDNENEDE------INDQHENGVELVYEVHSVSANAPY

A0A6J1DUS4 uncharacterized protein LOC1110236672.6e-3542.13Show/hide
Query:  MGGLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPLCVSNRKKHMVVVANEEIYHFILRPKYIS
        MGGLDVDE ITY +LV+AL+ LTRIDPDQF+++++C+Y+F  +YEV  + IFDD SLKFYLN PPDPSQVPL V+   K      +    +F       S
Subjt:  MGGLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPLCVSNRKKHMVVVANEEIYHFILRPKYIS

Query:  SSFPYFP-----------------------------------------GDDEPPHYGELYENEVDYKIENEAEYKFLEDNTEDEDDQVEYEYEGEHGYDN
        SSFPY+P                                          DDE P+YG+LYENEV+YK +++ EY + E  TED       E +G +GYDN
Subjt:  SSFPYFP-----------------------------------------GDDEPPHYGELYENEVDYKIENEAEYKFLEDNTEDEDDQVEYEYEGEHGYDN

Query:  ENEDE------INDQHENGVELVYEVHSVSANAPY
          EDE      +++ +EN  + V+E H++S NAPY
Subjt:  ENEDE------INDQHENGVELVYEVHSVSANAPY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGTTTAGACGTCGACGAAATGATAACATATGACGACTTAGTAAATGCATTGTACAGGCTTACGAGAATTGATCCTGATCAATTCAATATTGTTATAGAATGCAT
ATATAAATTTCAAATGCAATATGAAGTCTCTAAGTTCTTTATTTTCGATGATATTAGCCTCAAATTTTATTTGAATGACCCTCCAGACCCTTCTCAAGTGCCGTTGTGTG
TGTCCAACCGAAAGAAACATATGGTAGTGGTAGCAAACGAGGAAATATACCATTTTATTTTGAGACCCAAATATATATCATCTTCATTTCCATACTTTCCAGGCGATGAT
GAACCACCACATTATGGTGAATTGTATGAGAACGAGGTTGATTATAAGATTGAGAATGAGGCTGAGTATAAGTTTCTTGAAGATAACACTGAGGACGAGGATGATCAAGT
TGAATATGAGTATGAGGGTGAGCATGGATATGACAATGAGAATGAGGACGAGATTAATGATCAACATGAGAATGGAGTTGAACTTGTCTATGAGGTTCATTCAGTAAGTG
CAAATGCACCTTATCCTGTTCAATGCATACTATTACAACTATGGATGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGTTTAGACGTCGACGAAATGATAACATATGACGACTTAGTAAATGCATTGTACAGGCTTACGAGAATTGATCCTGATCAATTCAATATTGTTATAGAATGCAT
ATATAAATTTCAAATGCAATATGAAGTCTCTAAGTTCTTTATTTTCGATGATATTAGCCTCAAATTTTATTTGAATGACCCTCCAGACCCTTCTCAAGTGCCGTTGTGTG
TGTCCAACCGAAAGAAACATATGGTAGTGGTAGCAAACGAGGAAATATACCATTTTATTTTGAGACCCAAATATATATCATCTTCATTTCCATACTTTCCAGGCGATGAT
GAACCACCACATTATGGTGAATTGTATGAGAACGAGGTTGATTATAAGATTGAGAATGAGGCTGAGTATAAGTTTCTTGAAGATAACACTGAGGACGAGGATGATCAAGT
TGAATATGAGTATGAGGGTGAGCATGGATATGACAATGAGAATGAGGACGAGATTAATGATCAACATGAGAATGGAGTTGAACTTGTCTATGAGGTTCATTCAGTAAGTG
CAAATGCACCTTATCCTGTTCAATGCATACTATTACAACTATGGATGCAGTAG
Protein sequenceShow/hide protein sequence
MGGLDVDEMITYDDLVNALYRLTRIDPDQFNIVIECIYKFQMQYEVSKFFIFDDISLKFYLNDPPDPSQVPLCVSNRKKHMVVVANEEIYHFILRPKYISSSFPYFPGDD
EPPHYGELYENEVDYKIENEAEYKFLEDNTEDEDDQVEYEYEGEHGYDNENEDEINDQHENGVELVYEVHSVSANAPYPVQCILLQLWMQ