; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS026868 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026868
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein MODIFIER OF SNC1 11-like
Genome locationscaffold943_2:566568..568504
RNA-Seq ExpressionMS026868
SyntenyMS026868
Gene Ontology termsGO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040746 - THO1_MOS11, C-terminal domain
IPR044209 - Protein MODIFIER OF SNC1 11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143813.1 protein MODIFIER OF SNC1 11-like [Momordica charantia]1.9e-9699.02Show/hide
Query:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR
        MATVASAGLNDISNSKNPLGENPSQTLD TISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG
        AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTD EAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG

Query:  GGDA
        GGDA
Subjt:  GGDA

XP_022949856.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata]3.3e-8588.73Show/hide
Query:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR
        MATVASAG+NDISNSKNPLGENPSQTLDPTISSS  PP +V  SSTDGGSSKE +ESKGS K S+EGDG PVSD QRKMRRAERFGISVQLSEEEKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG
        AERFGMG TTNGLGASNKSEEVKRKARAERFGLPASV TDDEAKKKARL RFSSTSKPDSQEEEKRKARAIRFSNPTSNSL QVDGKG+IETIAD+ GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG

Query:  GGDA
        GG A
Subjt:  GGDA

XP_022977777.1 protein MODIFIER OF SNC1 11-like [Cucurbita maxima]3.3e-8588.73Show/hide
Query:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR
        MATVASAG+NDISNSKN LGENPSQTLDPTISSS  PP +V  SSTDGGSSKEM+ESKGS K S+EGDG PVSD QRKMRRAERFGISVQLSEEEKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG
        AERFGMG TTNGLGASNKSEEVKRKARAERFGLPASV TDDEAKKKARL RFSSTSKPDSQEEEKRKARAIRFSNPTSNSL QVDGKG+IETIAD+ GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG

Query:  GGDA
        GG A
Subjt:  GGDA

XP_023543781.1 protein MODIFIER OF SNC1 11-like [Cucurbita pepo subsp. pepo]4.5e-8286.76Show/hide
Query:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR
        MATVAS+G+NDISNSKNPLGENPSQTLDPTISSS  PP +V  SSTDG SSKE +ESKGS K S+EGDG PVSD QRKMRRAERFGISVQLSEEEKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG
        AERFGMG TTNGLGASNKSEEVKRKARAERFGLPASV TDDEAKKKARL RFSSTSKPDSQEEEKRKARAIRFSN TSNSL Q DGKG+IETIAD+ GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG

Query:  GGDA
        GG A
Subjt:  GGDA

XP_038882639.1 protein MODIFIER OF SNC1 11 [Benincasa hispida]2.8e-8487.75Show/hide
Query:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR
        MATVASAGLNDISNSK+PLGENPSQTLDPTISSS  PP +V  SSTDGGSSK+ +ESKGSGKAS+EGDGAPVSD QRKMRRAERFGISVQLSEEEKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG
        AERFGMG  TNGLGASNK+EEVKRKARAERFGL ASVTTDDEAKKKARLARFSSTSKPD QEEEKRKARAIRFSNPTSNS  Q+DGKG++ETIADV GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG

Query:  GGDA
        GG A
Subjt:  GGDA

TrEMBL top hitse value%identityAlignment
A0A0A0L0R4 Tho1_MOS11_C domain-containing protein2.2e-8286.76Show/hide
Query:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR
        MATVA AGLNDISNSKNPLGENPSQTL+ TISSS  PP +V PSSTDGGSSKE +ESK +GK S E DGAPVSD QRKMRRAERFGISVQLSEEEKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG
        AERFGMG TTNGLGASNK+EEVKRKARAERFGL ASVTTDDEAKKKARLARFSSTSKPD QEEEKRKARAIRFSNPT NSL QVDGKG++ETIADV GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG

Query:  GGDA
        GG A
Subjt:  GGDA

A0A5A7TZD8 Protein MODIFIER OF SNC1 11-like1.4e-8186.27Show/hide
Query:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR
        MATVA AGLNDISNSKNPLGENPSQTL+PTISSS   P +V PSSTDGGSSKE +ESK SGK S   DGAPVSD QRKMRRAERFGISVQLSEEEKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG
        AERFGMG TTNGLGASNK+EEVKRKARAERFGL ASVTTDDEAKKKARLARFSSTSKPD QEEEKRKARAIRFSNPT NS+ QVDGKG++ETIADV GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG

Query:  GGDA
        GG A
Subjt:  GGDA

A0A6J1CRN1 protein MODIFIER OF SNC1 11-like9.1e-9799.02Show/hide
Query:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR
        MATVASAGLNDISNSKNPLGENPSQTLD TISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG
        AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTD EAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG

Query:  GGDA
        GGDA
Subjt:  GGDA

A0A6J1GD78 protein MODIFIER OF SNC1 11-like1.6e-8588.73Show/hide
Query:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR
        MATVASAG+NDISNSKNPLGENPSQTLDPTISSS  PP +V  SSTDGGSSKE +ESKGS K S+EGDG PVSD QRKMRRAERFGISVQLSEEEKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG
        AERFGMG TTNGLGASNKSEEVKRKARAERFGLPASV TDDEAKKKARL RFSSTSKPDSQEEEKRKARAIRFSNPTSNSL QVDGKG+IETIAD+ GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG

Query:  GGDA
        GG A
Subjt:  GGDA

A0A6J1IR28 protein MODIFIER OF SNC1 11-like1.6e-8588.73Show/hide
Query:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR
        MATVASAG+NDISNSKN LGENPSQTLDPTISSS  PP +V  SSTDGGSSKEM+ESKGS K S+EGDG PVSD QRKMRRAERFGISVQLSEEEKRNSR
Subjt:  MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSR

Query:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG
        AERFGMG TTNGLGASNKSEEVKRKARAERFGLPASV TDDEAKKKARL RFSSTSKPDSQEEEKRKARAIRFSNPTSNSL QVDGKG+IETIAD+ GK 
Subjt:  AERFGMGATTNGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKG

Query:  GGDA
        GG A
Subjt:  GGDA

SwissProt top hitse value%identityAlignment
P82979 SAP domain-containing ribonucleoprotein2.3e-0439.47Show/hide
Query:  VSDTQRKMRRAERFGISVQLSEEEKRNSRAERFGMGAT-TNGLGASNKS--EEVKRKARAERFGLPASV---TTDDEAKKKARLARF------SSTSKPD
        +  T+R  +RAERF + V L  E K+ +RA RFG+ +  T GL + NK      K K RA+RFGL  S     ++D+ K K R  RF      + T   +
Subjt:  VSDTQRKMRRAERFGISVQLSEEEKRNSRAERFGMGAT-TNGLGASNKS--EEVKRKARAERFGLPASV---TTDDEAKKKARLARF------SSTSKPD

Query:  SQEEEKRKARAIRF
          E +KRK RA RF
Subjt:  SQEEEKRKARAIRF

Q5R4V4 SAP domain-containing ribonucleoprotein2.3e-0439.47Show/hide
Query:  VSDTQRKMRRAERFGISVQLSEEEKRNSRAERFGMGAT-TNGLGASNKS--EEVKRKARAERFGLPASV---TTDDEAKKKARLARF------SSTSKPD
        +  T+R  +RAERF + V L  E K+ +RA RFG+ +  T GL + NK      K K RA+RFGL  S     ++D+ K K R  RF      + T   +
Subjt:  VSDTQRKMRRAERFGISVQLSEEEKRNSRAERFGMGAT-TNGLGASNKS--EEVKRKARAERFGLPASV---TTDDEAKKKARLARF------SSTSKPD

Query:  SQEEEKRKARAIRF
          E +KRK RA RF
Subjt:  SQEEEKRKARAIRF

Q9LZ08 Protein MODIFIER OF SNC1 111.7e-2850.59Show/hide
Query:  GENPSQTLDPTISSSNNPPTAVQ---PSSTDGGSSKEMEESKGSGKAS--LEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSRAERFG--MGATTNG
        GENP + +D   +  +     +       +D G  KE  +S G G  +    GD +PV D Q+K+RRAERFG+SV+L+EEEKRNSRAERFG    A  NG
Subjt:  GENPSQTLDPTISSSNNPPTAVQ---PSSTDGGSSKEMEESKGSGKAS--LEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSRAERFG--MGATTNG

Query:  LGASNKSEEVKRKARAERFGLPASVTTDD----EAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTS
           + K+EE+KRKARA+RFG+P++ +T D    EAKKKARLARF   +K DS EE KRKARA+RFS   S
Subjt:  LGASNKSEEVKRKARAERFGLPASVTTDD----EAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTS

Arabidopsis top hitse value%identityAlignment
AT5G02770.1 unknown protein1.2e-2950.59Show/hide
Query:  GENPSQTLDPTISSSNNPPTAVQ---PSSTDGGSSKEMEESKGSGKAS--LEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSRAERFG--MGATTNG
        GENP + +D   +  +     +       +D G  KE  +S G G  +    GD +PV D Q+K+RRAERFG+SV+L+EEEKRNSRAERFG    A  NG
Subjt:  GENPSQTLDPTISSSNNPPTAVQ---PSSTDGGSSKEMEESKGSGKAS--LEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSRAERFG--MGATTNG

Query:  LGASNKSEEVKRKARAERFGLPASVTTDD----EAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTS
           + K+EE+KRKARA+RFG+P++ +T D    EAKKKARLARF   +K DS EE KRKARA+RFS   S
Subjt:  LGASNKSEEVKRKARAERFGLPASVTTDD----EAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGGTGGCTTCTGCGGGACTCAATGACATTAGTAATAGCAAGAATCCGCTTGGAGAAAACCCTAGTCAAACCCTAGACCCAACCATTTCTTCCTCCAACAATCC
TCCTACCGCCGTTCAGCCTTCGTCAACCGATGGCGGATCTTCGAAGGAAATGGAGGAATCTAAGGGCTCCGGTAAGGCGTCGCTTGAAGGGGATGGTGCACCGGTTTCTG
ACACCCAGAGGAAGATGCGCCGTGCCGAGCGTTTTGGGATCTCTGTGCAGTTGTCTGAAGAAGAGAAGCGTAATTCTCGAGCGGAACGGTTTGGTATGGGTGCCACAACG
AATGGATTGGGAGCATCGAACAAGTCAGAAGAGGTGAAGAGGAAGGCTAGAGCTGAGAGATTTGGGCTTCCTGCATCTGTGACTACTGATGATGAGGCAAAGAAGAAAGC
TCGTCTTGCTAGGTTTTCATCAACATCAAAGCCAGACTCCCAGGAGGAAGAAAAGAGGAAAGCAAGGGCAATCAGATTTTCTAATCCAACATCAAACTCTCTCGTACAAG
TAGATGGGAAAGGAAGCATCGAGACGATTGCAGATGTTACAGGGAAGGGTGGAGGTGACGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACGGTGGCTTCTGCGGGACTCAATGACATTAGTAATAGCAAGAATCCGCTTGGAGAAAACCCTAGTCAAACCCTAGACCCAACCATTTCTTCCTCCAACAATCC
TCCTACCGCCGTTCAGCCTTCGTCAACCGATGGCGGATCTTCGAAGGAAATGGAGGAATCTAAGGGCTCCGGTAAGGCGTCGCTTGAAGGGGATGGTGCACCGGTTTCTG
ACACCCAGAGGAAGATGCGCCGTGCCGAGCGTTTTGGGATCTCTGTGCAGTTGTCTGAAGAAGAGAAGCGTAATTCTCGAGCGGAACGGTTTGGTATGGGTGCCACAACG
AATGGATTGGGAGCATCGAACAAGTCAGAAGAGGTGAAGAGGAAGGCTAGAGCTGAGAGATTTGGGCTTCCTGCATCTGTGACTACTGATGATGAGGCAAAGAAGAAAGC
TCGTCTTGCTAGGTTTTCATCAACATCAAAGCCAGACTCCCAGGAGGAAGAAAAGAGGAAAGCAAGGGCAATCAGATTTTCTAATCCAACATCAAACTCTCTCGTACAAG
TAGATGGGAAAGGAAGCATCGAGACGATTGCAGATGTTACAGGGAAGGGTGGAGGTGACGCCTGA
Protein sequenceShow/hide protein sequence
MATVASAGLNDISNSKNPLGENPSQTLDPTISSSNNPPTAVQPSSTDGGSSKEMEESKGSGKASLEGDGAPVSDTQRKMRRAERFGISVQLSEEEKRNSRAERFGMGATT
NGLGASNKSEEVKRKARAERFGLPASVTTDDEAKKKARLARFSSTSKPDSQEEEKRKARAIRFSNPTSNSLVQVDGKGSIETIADVTGKGGGDA