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MS026912 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026912
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPathogenesis-related protein-1-like protein
Genome locationscaffold217:158005..158421
RNA-Seq ExpressionMS026912
SyntenyMS026912
Gene Ontology termsGO:0005615 - extracellular space (cellular component)
InterPro domainsIPR001283 - Cysteine-rich secretory protein-related
IPR002413 - Venom allergen 5-like
IPR014044 - CAP domain
IPR018244 - Allergen V5/Tpx-1-related, conserved site
IPR035940 - CAP superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148797.1 basic form of pathogenesis-related protein 1-like [Momordica charantia]1.2e-7899.28Show/hide
Query:  MAQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQI
        MAQNSPQDFVDTHNAVRAEVGV PVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQI
Subjt:  MAQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQI

Query:  VWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        VWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
Subjt:  VWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

XP_022952867.1 basic form of pathogenesis-related protein 1-like [Cucurbita moschata]5.6e-6886.13Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV
        AQNSP+DFVDTHN +RA VGVGPVSWD  LAAYAQNYA SK ETCEM HSNGPYGENLAEGYGEMTAVEAVKFWATEKKFY+H  NRCVGDECGHYTQIV
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV

Query:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        WR++K IGCARVKCENNWVFVIC+Y PPGNY+GQ PY
Subjt:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

XP_022972427.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima]4.3e-6886.13Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV
        AQNSP+DFVDTHN +RA VGVGPVSWD  LAAYAQNYA SK ETC+M HSNGPYGENLAEGYGEMTAVEAVKFWATEKKFY+H  NRCVGDECGHYTQIV
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV

Query:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        WRD+K IGCARVKCENNWVFVIC+Y PPGNY+GQ PY
Subjt:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

XP_023554743.1 basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]9.5e-6886.13Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV
        AQNSP+DFVDTHN VRA VGVGPVSWD  LA YAQNYA SK ETCEM HSNGPYGENLAEGYGEMTAVEAVKFWATEKKFY+H  N+CVGDECGHYTQIV
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV

Query:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        WRD+K IGCARVKCENNWVFVIC+Y PPGNY+GQ PY
Subjt:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

XP_038888452.1 basic form of pathogenesis-related protein 1-like [Benincasa hispida]7.8e-7089.05Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV
        AQNSPQDFVDTHN VRA VGVGPVSWD TLAAYAQNYA+SK +TCEM HSNGPYGENLAEGY EMTAVEAVKFWATEKKFY+H  NRCVGDECGHYTQIV
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV

Query:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        WRD+K IGCARVKCENNWVFVICNY+PPGNYIGQ PY
Subjt:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

TrEMBL top hitse value%identityAlignment
A0A1S3C012 basic form of pathogenesis-related protein 1-like6.6e-6784.67Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV
        AQNSPQDFVDTHN +RA VGVGPVSWD TLAAYAQ+YA+SK +TCEM HSNGPYGENLAEGY EMT VEAVKFWATEKKFY+H  NRCVGDECGHYTQIV
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV

Query:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        WR +  IGC RVKCENNWVFVICNY+PPGNYIGQ PY
Subjt:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

A0A5D3C4J9 Basic form of pathogenesis-related protein 1-like6.6e-6784.67Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV
        AQNSPQDFVDTHN +RA VGVGPVSWD TLAAYAQ+YA+SK +TCEM HSNGPYGENLAEGY EMT VEAVKFWATEKKFY+H  NRCVGDECGHYTQIV
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV

Query:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        WR +  IGC RVKCENNWVFVICNY+PPGNYIGQ PY
Subjt:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

A0A6J1D615 basic form of pathogenesis-related protein 1-like5.8e-7999.28Show/hide
Query:  MAQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQI
        MAQNSPQDFVDTHNAVRAEVGV PVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQI
Subjt:  MAQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQI

Query:  VWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        VWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
Subjt:  VWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

A0A6J1GLK3 basic form of pathogenesis-related protein 1-like2.7e-6886.13Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV
        AQNSP+DFVDTHN +RA VGVGPVSWD  LAAYAQNYA SK ETCEM HSNGPYGENLAEGYGEMTAVEAVKFWATEKKFY+H  NRCVGDECGHYTQIV
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV

Query:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        WR++K IGCARVKCENNWVFVIC+Y PPGNY+GQ PY
Subjt:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

A0A6J1I4S3 basic form of pathogenesis-related protein 1-like2.1e-6886.13Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV
        AQNSP+DFVDTHN +RA VGVGPVSWD  LAAYAQNYA SK ETC+M HSNGPYGENLAEGYGEMTAVEAVKFWATEKKFY+H  NRCVGDECGHYTQIV
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV

Query:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        WRD+K IGCARVKCENNWVFVIC+Y PPGNY+GQ PY
Subjt:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

SwissProt top hitse value%identityAlignment
P07053 Pathogenesis-related protein 1B6.7e-4860.43Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGE-MTAVEAVKFWATEKKFYDHRANRCV-GDECGHYTQ
        AQNS QD++D HN  RA+VGV P++WD  +AAYAQNY +  +  C +VHS+G YGENLA+G G+ MTA +AV+ W  EK++YDH +N C  G  CGHYTQ
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGE-MTAVEAVKFWATEKKFYDHRANRCV-GDECGHYTQ

Query:  IVWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        +VWR+S R+GCARVKC N    V CNYDPPGN IGQ PY
Subjt:  IVWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

P08299 Pathogenesis-related protein 1A3.9e-4860.43Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGE-MTAVEAVKFWATEKKFYDHRANRCV-GDECGHYTQ
        AQNS QD++D HN  RA+VGV P++WD  +AAYAQNYA+  +  C +VHS+G YGENLAEG G+ MTA +AV+ W  EK++YDH +N C  G  CGHYTQ
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGE-MTAVEAVKFWATEKKFYDHRANRCV-GDECGHYTQ

Query:  IVWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        +VWR+S R+GCARV+C N    V CNYDPPGNY G+ PY
Subjt:  IVWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

P09042 Pathogenesis-related protein 1C6.2e-4658.27Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGE-MTAVEAVKFWATEKKFYDHRANRCV-GDECGHYTQ
        AQNS QD++D HN  RA+VGV P++WD  +AAYAQNYA+  +  C +VHS+G YGENLA G G+ +TA +AV+ W  EK++Y H +N C  G  CGHYTQ
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGE-MTAVEAVKFWATEKKFYDHRANRCV-GDECGHYTQ

Query:  IVWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        +VWR+S R+GCARV+C N    V CNYDPPGN IG+ PY
Subjt:  IVWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

P11670 Basic form of pathogenesis-related protein 15.3e-5362.04Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV
        AQNSPQD+++ HNA R +VGVGP++WD  LAAYAQNYAN +   C M+HS+GPYGENLA  + ++ A  AVK W  EK+FYD+ +N CVG  CGHYTQ+V
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV

Query:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        WR+S R+GCARV+  N W F+ CNYDPPGN+IGQ P+
Subjt:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

Q08697 Pathogenesis-related protein 1A17.4e-4758.65Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCV-GDECGHYTQI
        AQ   ++F++ HNA R  VGVGP++WD  LAAYAQNYAN +++ C M+HS+GPYGENLA  + ++ A  AVK W  EK++YD+ +N C  G  CGHYTQ+
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCV-GDECGHYTQI

Query:  VWRDSKRIGCARVKCENNWVFVICNYDPPGNYI
        VWR S R+GCARV+C + WVF+ CNYDPPGNYI
Subjt:  VWRDSKRIGCARVKCENNWVFVICNYDPPGNYI

Arabidopsis top hitse value%identityAlignment
AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein2.0e-4757.55Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEG-YGEMTAVEAVKFWATEKKFYDHRANRCV-GDECGHYTQ
        AQN+PQD++++HN  RA+VGV  V WD TLAAYA NY+N +   C +VHSNGPYGENLA+G     +A+ AVK W  EK +Y +  N C  G +C HYTQ
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEG-YGEMTAVEAVKFWATEKKFYDHRANRCV-GDECGHYTQ

Query:  IVWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        +VWRDS +IGCARV+C N W FV CNY+ PGN++G+ PY
Subjt:  IVWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

AT2G14580.1 basic pathogenesis-related protein 11.1e-4555.47Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV
        AQ+S QD+V+ HN  R+++GVGP+ WD  LAAYA+NYAN     C +VHS GPYGENLA+  G+++ V AV  W  EK  Y++  N C G  CGHYTQ+V
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV

Query:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        WR+S R+GCA+V+C N    + CNYDPPGNY  Q PY
Subjt:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

AT2G14610.1 pathogenesis-related gene 16.0e-4453.28Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV
        AQ+SPQD++  HN  R  VGVGP+ WD  +AAYA++YA      C ++HS GPYGENLA G G+++ V AV  W +EK  Y++ AN C G  CGHYTQ+V
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV

Query:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        WR S R+GCA+V+C N    + CNYDP GNY+ + PY
Subjt:  WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY

AT2G19990.1 pathogenesis-related protein-1-like1.4e-4558.52Show/hide
Query:  PQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGD-ECGHYTQIVWRD
        PQ+ +  HN  RA VGVGP+ W+ TLA YAQ+YA+ ++  C M HS GP+GENLA G+G M+   A ++W TEK+ YD+ +N C GD  CGHYTQIVWRD
Subjt:  PQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGD-ECGHYTQIVWRD

Query:  SKRIGCARVKCENN-WVFVICNYDPPGNYIGQLPY
        S R+GCA V+C+N+ +++VIC+YDPPGNYIGQ PY
Subjt:  SKRIGCARVKCENN-WVFVICNYDPPGNYIGQLPY

AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein8.9e-4857.25Show/hide
Query:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGD-ECGHYTQI
        AQ+SPQDF+  HN  RAEVGVGP+ WD  +AAYA+NYAN +   C M HS+G YGEN+A   G MT V AV  W  E+  YD+ +N C  D +CGHYTQ+
Subjt:  AQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGD-ECGHYTQI

Query:  VWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY
        VWR+S+R+GCA+V+C N   F+ CNYDPPGN++G+ PY
Subjt:  VWRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAAAACTCCCCCCAAGACTTCGTGGACACGCACAACGCAGTCCGAGCCGAGGTCGGTGTCGGGCCGGTCTCCTGGGACGCCACCCTGGCTGCCTATGCTCAGAA
TTATGCCAACAGCAAGAGCGAGACCTGCGAGATGGTGCACTCCAATGGACCCTACGGCGAGAACCTGGCCGAGGGATACGGCGAGATGACTGCGGTGGAGGCGGTGAAGT
TCTGGGCAACTGAGAAGAAGTTCTACGACCACCGAGCGAACCGCTGCGTCGGGGACGAGTGCGGGCATTATACGCAGATAGTGTGGCGGGACAGTAAGCGTATAGGATGT
GCGAGAGTGAAGTGTGAGAACAACTGGGTTTTTGTGATCTGCAACTATGATCCTCCAGGCAACTATATTGGCCAACTTCCTTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCAAAACTCCCCCCAAGACTTCGTGGACACGCACAACGCAGTCCGAGCCGAGGTCGGTGTCGGGCCGGTCTCCTGGGACGCCACCCTGGCTGCCTATGCTCAGAA
TTATGCCAACAGCAAGAGCGAGACCTGCGAGATGGTGCACTCCAATGGACCCTACGGCGAGAACCTGGCCGAGGGATACGGCGAGATGACTGCGGTGGAGGCGGTGAAGT
TCTGGGCAACTGAGAAGAAGTTCTACGACCACCGAGCGAACCGCTGCGTCGGGGACGAGTGCGGGCATTATACGCAGATAGTGTGGCGGGACAGTAAGCGTATAGGATGT
GCGAGAGTGAAGTGTGAGAACAACTGGGTTTTTGTGATCTGCAACTATGATCCTCCAGGCAACTATATTGGCCAACTTCCTTACTGA
Protein sequenceShow/hide protein sequence
MAQNSPQDFVDTHNAVRAEVGVGPVSWDATLAAYAQNYANSKSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIVWRDSKRIGC
ARVKCENNWVFVICNYDPPGNYIGQLPY