; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS026937 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026937
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold9_2:27945..31527
RNA-Seq ExpressionMS026937
SyntenyMS026937
Gene Ontology termsGO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064858.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]9.7e-7063.64Show/hide
Query:  MLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFSS---GDRCELLHFRLQLQENSCPKDAQKLFDDMPDKDLVSWNSLI
        +LLL+    R FH   P + S   + D L      +S     +   R F+S  +     GD+    + +L   E     DAQKLFDDMP KDLVSWNSLI
Subjt:  MLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFSS---GDRCELLHFRLQLQENSCPKDAQKLFDDMPDKDLVSWNSLI

Query:  SGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSII
        SGFSR  CL MTL AFY +KFEMSIKPNE+TILSMISACN ALDAGKYIHGFA+KVG  LEVKV NSLINMYGK GDL SACRLFEA+  PNT+SWNSII
Subjt:  SGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSII

Query:  GAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
         AQVTNGCA++GID FNKMRR GIE DEGTILA+LQAC HLG
Subjt:  GAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG

XP_008445305.2 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g40410, mitochondrial-like [Cucumis melo]7.4e-7063.64Show/hide
Query:  MLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFSS---GDRCELLHFRLQLQENSCPKDAQKLFDDMPDKDLVSWNSLI
        +LLL+    R FH   P + S   + D L      +S     +   R F+S  +     GD+    + +L   E     DAQKLFDDMP KDLVSWNSLI
Subjt:  MLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFSS---GDRCELLHFRLQLQENSCPKDAQKLFDDMPDKDLVSWNSLI

Query:  SGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSII
        SGFSR  CL MTL AFY +KFEMSIKPNE+TILSMISACN ALDAGKYIHGFA+KVG  LEVKV NSLINMYGK GDL SACRLFEA+P PNT+SWNSII
Subjt:  SGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSII

Query:  GAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
         AQVTNGCA++GI  FNKMRR GIE DEGTILA+LQAC HLG
Subjt:  GAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG

XP_022144167.1 pentatricopeptide repeat-containing protein At5g40410, mitochondrial isoform X1 [Momordica charantia]3.2e-8972.11Show/hide
Query:  SMLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFS-----------SGDRCELLHFRLQLQENSCPKDAQKLFDDMPDK
        S+L       R  HP L  SF SV  L+  +         ++   S+ N R+                GD+    +  L      C +DAQKLFDDMPDK
Subjt:  SMLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFS-----------SGDRCELLHFRLQLQENSCPKDAQKLFDDMPDK

Query:  DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYP
        DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYP
Subjt:  DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYP

Query:  NTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
        NTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
Subjt:  NTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG

XP_022144168.1 pentatricopeptide repeat-containing protein At5g40410, mitochondrial isoform X2 [Momordica charantia]3.2e-8972.11Show/hide
Query:  SMLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFS-----------SGDRCELLHFRLQLQENSCPKDAQKLFDDMPDK
        S+L       R  HP L  SF SV  L+  +         ++   S+ N R+                GD+    +  L      C +DAQKLFDDMPDK
Subjt:  SMLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFS-----------SGDRCELLHFRLQLQENSCPKDAQKLFDDMPDK

Query:  DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYP
        DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYP
Subjt:  DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYP

Query:  NTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
        NTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
Subjt:  NTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG

XP_023546177.1 pentatricopeptide repeat-containing protein At5g40410, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]2.6e-7079.27Show/hide
Query:  KDAQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDL
        +DAQK+FDDMPD+DLVSWNSLI GFSR  CL +TLKAF  +KFEMS+KPNE+TILSMISACN ALD G+YIHGFA+K+GV LEVKVVNSLINMYGK GDL
Subjt:  KDAQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDL

Query:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
         SACRLFEA+PYPN +SWNSII A+VTNGCA +G+ CFNKMR  GIEPDEGTILA+LQAC HLG
Subjt:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG

TrEMBL top hitse value%identityAlignment
A0A1S3BBW7 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g40410, mitochondrial-like3.6e-7063.64Show/hide
Query:  MLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFSS---GDRCELLHFRLQLQENSCPKDAQKLFDDMPDKDLVSWNSLI
        +LLL+    R FH   P + S   + D L      +S     +   R F+S  +     GD+    + +L   E     DAQKLFDDMP KDLVSWNSLI
Subjt:  MLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFSS---GDRCELLHFRLQLQENSCPKDAQKLFDDMPDKDLVSWNSLI

Query:  SGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSII
        SGFSR  CL MTL AFY +KFEMSIKPNE+TILSMISACN ALDAGKYIHGFA+KVG  LEVKV NSLINMYGK GDL SACRLFEA+P PNT+SWNSII
Subjt:  SGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSII

Query:  GAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
         AQVTNGCA++GI  FNKMRR GIE DEGTILA+LQAC HLG
Subjt:  GAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG

A0A5A7VB72 Pentatricopeptide repeat-containing protein4.7e-7063.64Show/hide
Query:  MLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFSS---GDRCELLHFRLQLQENSCPKDAQKLFDDMPDKDLVSWNSLI
        +LLL+    R FH   P + S   + D L      +S     +   R F+S  +     GD+    + +L   E     DAQKLFDDMP KDLVSWNSLI
Subjt:  MLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFSS---GDRCELLHFRLQLQENSCPKDAQKLFDDMPDKDLVSWNSLI

Query:  SGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSII
        SGFSR  CL MTL AFY +KFEMSIKPNE+TILSMISACN ALDAGKYIHGFA+KVG  LEVKV NSLINMYGK GDL SACRLFEA+  PNT+SWNSII
Subjt:  SGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSII

Query:  GAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
         AQVTNGCA++GID FNKMRR GIE DEGTILA+LQAC HLG
Subjt:  GAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG

A0A6J1CSK8 pentatricopeptide repeat-containing protein At5g40410, mitochondrial isoform X21.6e-8972.11Show/hide
Query:  SMLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFS-----------SGDRCELLHFRLQLQENSCPKDAQKLFDDMPDK
        S+L       R  HP L  SF SV  L+  +         ++   S+ N R+                GD+    +  L      C +DAQKLFDDMPDK
Subjt:  SMLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFS-----------SGDRCELLHFRLQLQENSCPKDAQKLFDDMPDK

Query:  DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYP
        DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYP
Subjt:  DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYP

Query:  NTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
        NTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
Subjt:  NTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG

A0A6J1CSX2 pentatricopeptide repeat-containing protein At5g40410, mitochondrial isoform X11.6e-8972.11Show/hide
Query:  SMLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFS-----------SGDRCELLHFRLQLQENSCPKDAQKLFDDMPDK
        S+L       R  HP L  SF SV  L+  +         ++   S+ N R+                GD+    +  L      C +DAQKLFDDMPDK
Subjt:  SMLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFS-----------SGDRCELLHFRLQLQENSCPKDAQKLFDDMPDK

Query:  DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYP
        DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYP
Subjt:  DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYP

Query:  NTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
        NTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
Subjt:  NTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG

A0A6J1K9V7 pentatricopeptide repeat-containing protein At5g40410, mitochondrial8.0e-7078.05Show/hide
Query:  KDAQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDL
        +DAQK+FDDMPD+DLVSWNSLI GFSR  CL +TLKAF  +KFEMS+KPNE+TILSMISACN ALD G+YIHGFA+K+GV LEVKVVNS INMYGK GDL
Subjt:  KDAQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDL

Query:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
         SACRLFEA+PYPN +SWNSII A+VTNGCA +G+ CFNKMR  G+EPDEGTILA+LQAC HLG
Subjt:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG

SwissProt top hitse value%identityAlignment
O82380 Pentatricopeptide repeat-containing protein At2g29760, chloroplastic2.1e-2734.09Show/hide
Query:  AQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDL
        A+++ + MP KD+V+WN+LIS + +    +  L  F+ L+ + ++K N+IT++S +SAC +  AL+ G++IH +  K G+ +   V ++LI+MY K GDL
Subjt:  AQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDL

Query:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLGCKSGTIDLAPSL
        + +  +F +V   +   W+++IG    +GC  + +D F KM+   ++P+  T   V  AC H    +G +D A SL
Subjt:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLGCKSGTIDLAPSL

P93011 Pentatricopeptide repeat-containing protein At2g337609.6e-2836.36Show/hide
Query:  AQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDL
        A+++FD MP+K +V+WNSL+SGF +    D  ++ FY ++ E   +P+  T +S++SAC +  A+  G ++H + +  G+ L VK+  +LIN+Y + GD+
Subjt:  AQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDL

Query:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMR-RLGIEPDEGTILAVLQACEHLG
          A  +F+ +   N  +W ++I A  T+G  Q+ ++ FNKM    G  P+  T +AVL AC H G
Subjt:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMR-RLGIEPDEGTILAVLQACEHLG

Q9FND6 Pentatricopeptide repeat-containing protein At5g40410, mitochondrial8.0e-4348.65Show/hide
Query:  ELLHFRLQLQENSCPKDAQKLFDDMPDKDLVSWNSLISGFS----RGKCLDMTLKAFYLLKFEMSIKPNEITILSMISAC--NEALDAGKYIHGFAVKVG
        +L+   L+L  + C   A+KLFD+MP++DLVSWNSLISG+S     GKC ++  +   ++  E+  +PNE+T LSMISAC    + + G+ IHG  +K G
Subjt:  ELLHFRLQLQENSCPKDAQKLFDDMPDKDLVSWNSLISGFS----RGKCLDMTLKAFYLLKFEMSIKPNEITILSMISAC--NEALDAGKYIHGFAVKVG

Query:  VFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
        V  EVKVVN+ IN YGK GDL S+C+LFE +   N +SWN++I   + NG A+KG+  FN  RR+G EPD+ T LAVL++CE +G
Subjt:  VFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG

Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic6.0e-3035.71Show/hide
Query:  KDAQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYG
        ++AQKLFD++P KD+VSWN++ISG++        L+ F  +  + +++P+E T+++++SAC +  +++ G+ +H +    G    +K+VN+LI++Y K G
Subjt:  KDAQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYG

Query:  DLQSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLGCKSGTIDLAPSLSLYL
        +L++AC LFE +PY + ISWN++IG        ++ +  F +M R G  P++ T+L++L AC HL    G ID+   + +Y+
Subjt:  DLQSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLGCKSGTIDLAPSLSLYL

Q9SZT8 Pentatricopeptide repeat-containing protein ELI1, chloroplastic4.7e-2735.59Show/hide
Query:  AQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDL
        A+ LFD M ++D+VSWN +I G+++    +  L  F  L  E   KP+EIT+++ +SAC++  AL+ G++IH F     + L VKV   LI+MY K G L
Subjt:  AQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDL

Query:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRL-GIEPDEGTILAVLQACEHLGCKSGTIDLAPSL
        + A  +F   P  + ++WN++I     +G +Q  +  FN+M+ + G++P + T +  LQAC H G  +  I +  S+
Subjt:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRL-GIEPDEGTILAVLQACEHLGCKSGTIDLAPSL

Arabidopsis top hitse value%identityAlignment
AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.3e-3135.71Show/hide
Query:  KDAQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYG
        ++AQKLFD++P KD+VSWN++ISG++        L+ F  +  + +++P+E T+++++SAC +  +++ G+ +H +    G    +K+VN+LI++Y K G
Subjt:  KDAQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYG

Query:  DLQSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLGCKSGTIDLAPSLSLYL
        +L++AC LFE +PY + ISWN++IG        ++ +  F +M R G  P++ T+L++L AC HL    G ID+   + +Y+
Subjt:  DLQSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLGCKSGTIDLAPSLSLYL

AT1G13410.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.6e-2835.37Show/hide
Query:  QKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGV-FLEVKVVNSLINMYGKYGDL
        +++FDDMP++++ SWN LI G+++   +   L +F  +  E S+ PN+ T+  ++SAC +  A D GK++H +   +G   ++V V N+LI+MYGK G +
Subjt:  QKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGV-FLEVKVVNSLINMYGKYGDL

Query:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
        + A  +F+ +   + ISWN++I     +G   + ++ F++M+  GI PD+ T + VL AC+H+G
Subjt:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG

AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.5e-2834.09Show/hide
Query:  AQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDL
        A+++ + MP KD+V+WN+LIS + +    +  L  F+ L+ + ++K N+IT++S +SAC +  AL+ G++IH +  K G+ +   V ++LI+MY K GDL
Subjt:  AQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDL

Query:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLGCKSGTIDLAPSL
        + +  +F +V   +   W+++IG    +GC  + +D F KM+   ++P+  T   V  AC H    +G +D A SL
Subjt:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLGCKSGTIDLAPSL

AT2G33760.1 Pentatricopeptide repeat (PPR) superfamily protein6.8e-2936.36Show/hide
Query:  AQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDL
        A+++FD MP+K +V+WNSL+SGF +    D  ++ FY ++ E   +P+  T +S++SAC +  A+  G ++H + +  G+ L VK+  +LIN+Y + GD+
Subjt:  AQKLFDDMPDKDLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNE--ALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDL

Query:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMR-RLGIEPDEGTILAVLQACEHLG
          A  +F+ +   N  +W ++I A  T+G  Q+ ++ FNKM    G  P+  T +AVL AC H G
Subjt:  QSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMR-RLGIEPDEGTILAVLQACEHLG

AT5G40410.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.7e-4448.65Show/hide
Query:  ELLHFRLQLQENSCPKDAQKLFDDMPDKDLVSWNSLISGFS----RGKCLDMTLKAFYLLKFEMSIKPNEITILSMISAC--NEALDAGKYIHGFAVKVG
        +L+   L+L  + C   A+KLFD+MP++DLVSWNSLISG+S     GKC ++  +   ++  E+  +PNE+T LSMISAC    + + G+ IHG  +K G
Subjt:  ELLHFRLQLQENSCPKDAQKLFDDMPDKDLVSWNSLISGFS----RGKCLDMTLKAFYLLKFEMSIKPNEITILSMISAC--NEALDAGKYIHGFAVKVG

Query:  VFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG
        V  EVKVVN+ IN YGK GDL S+C+LFE +   N +SWN++I   + NG A+KG+  FN  RR+G EPD+ T LAVL++CE +G
Subjt:  VFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDCFNKMRRLGIEPDEGTILAVLQACEHLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGATGGTATTTTTGCCTCGATGCTGCTCCTTATTTCTGTTTCCTACCGAATTTTTCATCCGCCACTACCAGGATCCTTCAGTTCTGTTCAAATTCTTGACCCACT
CAAGAAAACATCACCCCCTTCTTCTGCGGTCATTTCACCTGATCCATCAATTAGAAACTTCAGAAGCGCTTGTTTCAGCTCTGGTGATCGCTGTGAACTCTTGCACTTCC
GTCTCCAATTGCAGGAAAATTCATGCCCGAAGGATGCACAGAAGCTGTTTGATGATATGCCTGATAAGGATTTGGTTTCTTGGAACTCACTGATTTCGGGTTTTTCACGA
GGAAAGTGTCTTGATATGACCCTAAAAGCATTCTATTTGTTGAAGTTTGAAATGTCAATTAAACCCAATGAGATCACGATTCTATCGATGATATCAGCTTGTAATGAAGC
TTTAGATGCAGGGAAGTATATTCATGGCTTTGCAGTTAAAGTTGGCGTTTTTTTGGAAGTTAAGGTCGTTAATTCTCTCATTAACATGTATGGGAAGTATGGGGATTTAC
AATCAGCTTGTAGATTGTTTGAGGCTGTTCCATACCCGAATACGATATCATGGAATTCAATAATTGGAGCTCAAGTTACTAATGGCTGTGCACAAAAGGGAATTGACTGT
TTTAATAAGATGAGAAGGCTTGGGATTGAGCCGGATGAAGGGACTATCCTGGCAGTGCTTCAAGCTTGCGAGCATTTGGGTTGCAAATCTGGAACAATTGACCTTGCGCC
TTCGCTTTCTCTGTATCTGAAACTTTTTGATCTAAAACGAGGGAACTCGAAAGAGAGAGAGTTGTCGGCGGCGAACTACATTGAGAAAATGAGTAGCGGCGGCGACGGTT
GGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGATGGTATTTTTGCCTCGATGCTGCTCCTTATTTCTGTTTCCTACCGAATTTTTCATCCGCCACTACCAGGATCCTTCAGTTCTGTTCAAATTCTTGACCCACT
CAAGAAAACATCACCCCCTTCTTCTGCGGTCATTTCACCTGATCCATCAATTAGAAACTTCAGAAGCGCTTGTTTCAGCTCTGGTGATCGCTGTGAACTCTTGCACTTCC
GTCTCCAATTGCAGGAAAATTCATGCCCGAAGGATGCACAGAAGCTGTTTGATGATATGCCTGATAAGGATTTGGTTTCTTGGAACTCACTGATTTCGGGTTTTTCACGA
GGAAAGTGTCTTGATATGACCCTAAAAGCATTCTATTTGTTGAAGTTTGAAATGTCAATTAAACCCAATGAGATCACGATTCTATCGATGATATCAGCTTGTAATGAAGC
TTTAGATGCAGGGAAGTATATTCATGGCTTTGCAGTTAAAGTTGGCGTTTTTTTGGAAGTTAAGGTCGTTAATTCTCTCATTAACATGTATGGGAAGTATGGGGATTTAC
AATCAGCTTGTAGATTGTTTGAGGCTGTTCCATACCCGAATACGATATCATGGAATTCAATAATTGGAGCTCAAGTTACTAATGGCTGTGCACAAAAGGGAATTGACTGT
TTTAATAAGATGAGAAGGCTTGGGATTGAGCCGGATGAAGGGACTATCCTGGCAGTGCTTCAAGCTTGCGAGCATTTGGGTTGCAAATCTGGAACAATTGACCTTGCGCC
TTCGCTTTCTCTGTATCTGAAACTTTTTGATCTAAAACGAGGGAACTCGAAAGAGAGAGAGTTGTCGGCGGCGAACTACATTGAGAAAATGAGTAGCGGCGGCGACGGTT
GGTAA
Protein sequenceShow/hide protein sequence
MVDGIFASMLLLISVSYRIFHPPLPGSFSSVQILDPLKKTSPPSSAVISPDPSIRNFRSACFSSGDRCELLHFRLQLQENSCPKDAQKLFDDMPDKDLVSWNSLISGFSR
GKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHGFAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSIIGAQVTNGCAQKGIDC
FNKMRRLGIEPDEGTILAVLQACEHLGCKSGTIDLAPSLSLYLKLFDLKRGNSKERELSAANYIEKMSSGGDGW