; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS026938 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026938
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold9_2:34342..37520
RNA-Seq ExpressionMS026938
SyntenyMS026938
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585515.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.6e-18188.22Show/hide
Query:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF
        MSL LLPQHR+ FNSLL+YT+ KD QKGKAIHA LLRTGS SSVYL+NSLVNLYAKCGSLVKAKL+F+SITNKDVVSWN LIN YSQQGP GS  VME+F
Subjt:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF

Query:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL
        QRMRAENTLPNAHTFAGVFTAASS  ET GGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDR+PERNSVSWATMISGYAMQRKA EAW L
Subjt:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL

Query:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK
        FLLMCR EGIHNEFIYTSVLS LTVPELVD GKQIHCLALKNGLLS+VSVGNALVTMYAKC CLDDALKTFE SGDKNSITWSAMITGYAQAG+SHEALK
Subjt:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK

Query:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQGRTI
        LFSYMHFNGNKPSEFTFVGVINACSD+GAL EGKQMHGYSLKMGYESQI+I+TALVD+ ++  ++
Subjt:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQGRTI

KAG7020430.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-18288.22Show/hide
Query:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF
        MSL LLPQHR+ FNSLL+YT+ KD QKGKAIHA LLRTGS SSVYL+NSLVNLYAKCGSLVKAKL+F+SITNKDVVSWN LIN YSQQGP GS  VME+F
Subjt:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF

Query:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL
        QRMRAENTLPNAHTFAGVFTAASS  ET GGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDR+PERNSVSWATMISGYAMQRKA EAW L
Subjt:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL

Query:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK
        FLLMCR EGIHNEFIYTSVLS LTVPELVD GKQIHCLALKNGLLS+VSVGNALVTMYAKC CLDDALKTFE SGDKNSITWSAMITGYAQAG+SHEALK
Subjt:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK

Query:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQGRTI
        LFSYMHFNGNKPSEFTFVGVINACSD+GAL EGKQMHGYSLKMGYESQI++MTALVD+ ++  ++
Subjt:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQGRTI

XP_022144247.1 pentatricopeptide repeat-containing protein At2g33680 [Momordica charantia]6.1e-20299.44Show/hide
Query:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF
        MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF
Subjt:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF

Query:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL
        QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL
Subjt:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL

Query:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK
        FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEF+GDKNSITWSAMITGYAQAGDSHEALK
Subjt:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK

Query:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDI
        LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVD+
Subjt:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDI

XP_022951065.1 pentatricopeptide repeat-containing protein At2g33680 [Cucurbita moschata]3.5e-18187.95Show/hide
Query:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF
        MSL LLPQHR+ FNSLL+YT+ KD QKGKAIHA LLRTGS SSVYL+NSLVNLYAKCGSLVKAKL+F+SITNKDVVSWN LIN YSQQGP GS  VME+F
Subjt:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF

Query:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL
        QRMRAENTLPNAHTFAGVFTAASS  ET GGLQAHAL+IKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDR+PERNSVSWATMISGYAMQRKA EAW L
Subjt:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL

Query:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK
        FLLMCR EGIHNEFIYTSVLS LTVPELVD GKQIHCLALKNGLLS+VSVGNALVTMYAKC CLDDALKTFE SGDKNSITWSAMITGYAQAG+SHEALK
Subjt:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK

Query:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQGRTI
        LFSYMHFNGNKPSEFTFVGVINACSD+GAL EGKQMHGYSLKMGYESQI+I+TALVD+ ++  ++
Subjt:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQGRTI

XP_023536977.1 pentatricopeptide repeat-containing protein At2g33680 [Cucurbita pepo subsp. pepo]1.8e-18288.49Show/hide
Query:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF
        MSL LLPQHR+ FNSLL+YT+ KD QKGKAIHA LLRTGS SSVYL+NSLVNLYAKCGSLVKAKL+F+SITNKDVVSWN LIN YSQQGP GS  VME+F
Subjt:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF

Query:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL
        QRMRAENTLPNAHTFAGVFTAASS  ET GGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDR+PERNSVSWATMISGYAMQRKA EAW L
Subjt:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL

Query:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK
        FLLMCR+EGIHNEFIYTSVLS LTVPELVD GKQIHCLALKNGLLS+VSVGNALVTMYAKC CLDDALKTFE SGDKNSITWSAMITGYAQAG+SHEALK
Subjt:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK

Query:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQGRTI
        LFSYMHFNGNKPSEFTFVGVINACSD+GAL EGKQMHGYSLKMGYESQI+IMTALVD+ ++  ++
Subjt:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQGRTI

TrEMBL top hitse value%identityAlignment
A0A1S3BCD5 pentatricopeptide repeat-containing protein At2g336803.9e-17084.96Show/hide
Query:  MSLLLL-PQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEI
        MSL LL PQHRSFF+ LL+YT  KDLQKGKAIHAQLLRTGS  SVYL NSLVNLYAKCGSL+KAKL+FESI+NKDVVSWNCLINGYSQ+G  GS  VME+
Subjt:  MSLLLL-PQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEI

Query:  FQRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWG
        FQRMRAENTLPNAHTF+GVFTAASSSPET GGLQAHALAIKTS+FYDVFVGSSL+NMYCKIGCLLDARKVFD IPERN VSWATMISGYAM+R ALEAW 
Subjt:  FQRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWG

Query:  LFLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEAL
        LFLLM REEG H++FIYT VLSALTVP+LV +GKQIHCLALKNGLLS+ SVGNALVTMY KC CLDDALKTFE SGDK+ ITWSAMITGYAQAGDS EAL
Subjt:  LFLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEAL

Query:  KLFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDI
        KLF  MH NGNKPSEFTFVGVINACSDIGAL EGKQ+HGYSLK GYE QI+ MTALVD+
Subjt:  KLFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDI

A0A5A7VCE6 Pentatricopeptide repeat-containing protein1.3e-17084.96Show/hide
Query:  MSLLLL-PQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEI
        MSL LL PQHRSFF+ LL+YT  KDLQKGKAIHAQLLRTGS  SVYL NSLVNLYAKCGSL+KAKL+FESI+NKDVVSWNCLINGYSQ+G  GS  VME+
Subjt:  MSLLLL-PQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEI

Query:  FQRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWG
        FQRMRAENTLPNAHTF+GVFTAASSSPET GGLQAHALAIKTS+FYDVFVGSSL+NMYCKIGCLLDARKVFD IPERN VSWATMISGYAM+R ALEAW 
Subjt:  FQRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWG

Query:  LFLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEAL
        LFLLM REEG+H++FIYT VLSALTVP+LV +GKQIHCLALKNGLLS+ SVGNALVTMY KC CLDDALKTFE SGDK+ ITWSAMITGYAQAGDS EAL
Subjt:  LFLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEAL

Query:  KLFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDI
        KLF  MH NGNKPSEFTFVGVINACSDIGAL EGKQ+HGYSLK GYE QI+ MTALVD+
Subjt:  KLFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDI

A0A6J1CT51 pentatricopeptide repeat-containing protein At2g336803.0e-20299.44Show/hide
Query:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF
        MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF
Subjt:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF

Query:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL
        QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL
Subjt:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL

Query:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK
        FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEF+GDKNSITWSAMITGYAQAGDSHEALK
Subjt:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK

Query:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDI
        LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVD+
Subjt:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDI

A0A6J1GHM1 pentatricopeptide repeat-containing protein At2g336801.7e-18187.95Show/hide
Query:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF
        MSL LLPQHR+ FNSLL+YT+ KD QKGKAIHA LLRTGS SSVYL+NSLVNLYAKCGSLVKAKL+F+SITNKDVVSWN LIN YSQQGP GS  VME+F
Subjt:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF

Query:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL
        QRMRAENTLPNAHTFAGVFTAASS  ET GGLQAHAL+IKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDR+PERNSVSWATMISGYAMQRKA EAW L
Subjt:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL

Query:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK
        FLLMCR EGIHNEFIYTSVLS LTVPELVD GKQIHCLALKNGLLS+VSVGNALVTMYAKC CLDDALKTFE SGDKNSITWSAMITGYAQAG+SHEALK
Subjt:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK

Query:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQGRTI
        LFSYMHFNGNKPSEFTFVGVINACSD+GAL EGKQMHGYSLKMGYESQI+I+TALVD+ ++  ++
Subjt:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQGRTI

A0A6J1KIZ2 pentatricopeptide repeat-containing protein At2g336802.7e-17987.4Show/hide
Query:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF
        MSL LLPQHR+ FNSLL+YT+ KD QKGKAIHA LLR GS SSVYL+NSLVNLYAKCGSLVKAKL+F+SITNKDVVSWN LIN YSQQGP GS  VME+F
Subjt:  MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIF

Query:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL
        QRMRAENTLPNAHTFAGVFTAASS  ET GGLQAHALAIKT SFYDVFVGSSLLNMYCKIGCLLDARKVFDR+PERNSVSWATMISGYAMQRKA EAW L
Subjt:  QRMRAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGL

Query:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK
        FLLMCREEGIHNEFIYTSVLS LTV ELV  GKQIHCLALKNGLLS+VSVGNALVTMYAKC CLDDALKTFE SGDKNSITWSAMITGYAQAG+SHEALK
Subjt:  FLLMCREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALK

Query:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQGRTI
        LFS MHFNGNKPSEFTFVGVINACSD+GALGEGKQMHGYSLKMG+ESQI+IMTALVD+ ++  ++
Subjt:  LFSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQGRTI

SwissProt top hitse value%identityAlignment
O64705 Pentatricopeptide repeat-containing protein At2g344005.1e-5034.6Show/hide
Query:  LKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMRAENTLPNAHTFAGVFTA
        L+++  G+++H+ L + G    V++ +SL+ +YAKCG +  A+ +F+ IT +D VSWN +I+GYS+ G A     M++F++M  E   P+  T   +  A
Subjt:  LKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMRAENTLPNAHTFAGVFTA

Query:  ASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLMCREEGIHNEFIYTSVLS
         S   +   G     +AI        F+GS L++MY K G L  AR+VF+++ +++ V+W  MI+ Y+   K+ EA+ LF  M +     +    ++VLS
Subjt:  ASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLMCREEGIHNEFIYTSVLS

Query:  ALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVI
        A      ++ GKQI   A +  L   + V   LV MY KC  +++AL+ FE    KN  TW+AMIT YA  G + EAL LF  M      PS+ TF+GV+
Subjt:  ALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVI

Query:  NACSDIGALGEG-KQMHGYSLKMGYESQIFIMTALVDICSQ
        +AC   G + +G +  H  S   G   +I   T ++D+ S+
Subjt:  NACSDIGALGEG-KQMHGYSLKMGYESQIFIMTALVDICSQ

P93005 Pentatricopeptide repeat-containing protein At2g336804.1e-10052.1Show/hide
Query:  LLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGP-AGSPLVMEIFQRM
        L P   +    L  ++  ++L  G+A+H Q++RTG+ + +  AN LVN YAKCG L KA  IF +I  KDVVSWN LI GYSQ G  + S  VM++F+ M
Subjt:  LLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGP-AGSPLVMEIFQRM

Query:  RAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLL
        RA++ LPNA+T AG+F A SS   ++ G QAHAL +K SSF D++V +SL+ MYCK G + D  KVF  +PERN+ +W+TM+SGYA + +  EA  +F L
Subjt:  RAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLL

Query:  MCR--EEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKL
          R  EEG  +++++T+VLS+L     V  G+QIHC+ +KNGLL  V++ NALVTMY+KC  L++A K F+ SGD+NSITWSAM+TGY+Q G+S EA+KL
Subjt:  MCR--EEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKL

Query:  FSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDI
        FS M   G KPSE+T VGV+NACSDI  L EGKQ+H + LK+G+E  +F  TALVD+
Subjt:  FSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDI

Q9C9I3 Pentatricopeptide repeat-containing protein At1g71460, chloroplastic3.0e-5032.87Show/hide
Query:  LPQHRSFFNSLLQ-YTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMR
        +P + + F++LL+     K L  GK +H  +   G  S+ +L   LV++Y  CGS+  A+ +F+  T+ +V SWN L+ G    G      V+  F  MR
Subjt:  LPQHRSFFNSLLQ-YTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMR

Query:  AENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLM
              N ++ + VF + + +     GL+ HALAIK   F  VF+ +SL++MY K G +  AR+VFD I ER+ V W  MI+G A  ++  EA GLF  M
Subjt:  AENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLM

Query:  CREEGIH-NEFIYTSVLSALTVPELVDHGKQIHCLALKN-GLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLF
          EE I+ N  I T++L  L   + +  GK++H   LK+   +    V + L+ +Y KC  +    + F  S  +N+I+W+A+++GYA  G   +AL+  
Subjt:  CREEGIH-NEFIYTSVLSALTVPELVDHGKQIHCLALKN-GLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLF

Query:  SYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQ
         +M   G +P   T   V+  C+++ A+ +GK++H Y+LK  +   + ++T+L+ + S+
Subjt:  SYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQ

Q9LIQ7 Pentatricopeptide repeat-containing protein At3g24000, mitochondrial9.9e-5433.33Show/hide
Query:  LPQHRSFFNSLL-QYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMR
        +P  R F+N+LL + T  K L +G+ +HA +L++     + + N+L+N+YAKCGSL +A+ +FE +  +D V+W  LI+GYSQ       L+   F +M 
Subjt:  LPQHRSFFNSLL-QYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMR

Query:  AENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLM
             PN  T + V  AA++      G Q H   +K     +V VGS+LL++Y + G + DA+ VFD +  RN VSW  +I+G+A +    +A  LF  M
Subjt:  AENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLM

Query:  CREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSY
         R+    + F Y S+  A +    ++ GK +H   +K+G   V   GN L+ MYAK   + DA K F+    ++ ++W++++T YAQ G   EA+  F  
Subjt:  CREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSY

Query:  MHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQ----GRTIPVINKFP
        M   G +P+E +F+ V+ ACS  G L EG   +    K G   + +    +VD+  +     R +  I + P
Subjt:  MHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQ----GRTIPVINKFP

Q9ZQ74 Pentatricopeptide repeat-containing protein At2g03380, mitochondrial1.6e-5135.63Show/hide
Query:  FFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMRAENTLPN
        F  +L   T L+DL  GK IH QL++  SF +V L   L+++YAKCG +  A  +F  IT ++VV W  +I GY +       LV  +F RMR  N L N
Subjt:  FFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMRAENTLPN

Query:  AHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLMCREEGIH
         +T+  +  A +       G   H   +K+       + +SLL+MY K G + +AR+VF+     + V W  MI GY       EA  LF  M   E   
Subjt:  AHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLMCREEGIH

Query:  NEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNK
        N     SVLS   + E ++ G+ +H L++K G+    +V NALV MYAKC    DA   FE   +K+ + W+++I+G++Q G  HEAL LF  M+     
Subjt:  NEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNK

Query:  PSEFTFVGVINACSDIGALGEGKQMHGYSLKMGY--ESQIFIMTALVD
        P+  T   + +AC+ +G+L  G  +H YS+K+G+   S + + TAL+D
Subjt:  PSEFTFVGVINACSDIGALGEGKQMHGYSLKMGY--ESQIFIMTALVD

Arabidopsis top hitse value%identityAlignment
AT1G71460.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.1e-5132.87Show/hide
Query:  LPQHRSFFNSLLQ-YTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMR
        +P + + F++LL+     K L  GK +H  +   G  S+ +L   LV++Y  CGS+  A+ +F+  T+ +V SWN L+ G    G      V+  F  MR
Subjt:  LPQHRSFFNSLLQ-YTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMR

Query:  AENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLM
              N ++ + VF + + +     GL+ HALAIK   F  VF+ +SL++MY K G +  AR+VFD I ER+ V W  MI+G A  ++  EA GLF  M
Subjt:  AENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLM

Query:  CREEGIH-NEFIYTSVLSALTVPELVDHGKQIHCLALKN-GLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLF
          EE I+ N  I T++L  L   + +  GK++H   LK+   +    V + L+ +Y KC  +    + F  S  +N+I+W+A+++GYA  G   +AL+  
Subjt:  CREEGIH-NEFIYTSVLSALTVPELVDHGKQIHCLALKN-GLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLF

Query:  SYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQ
         +M   G +P   T   V+  C+++ A+ +GK++H Y+LK  +   + ++T+L+ + S+
Subjt:  SYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQ

AT2G03380.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-5235.63Show/hide
Query:  FFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMRAENTLPN
        F  +L   T L+DL  GK IH QL++  SF +V L   L+++YAKCG +  A  +F  IT ++VV W  +I GY +       LV  +F RMR  N L N
Subjt:  FFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMRAENTLPN

Query:  AHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLMCREEGIH
         +T+  +  A +       G   H   +K+       + +SLL+MY K G + +AR+VF+     + V W  MI GY       EA  LF  M   E   
Subjt:  AHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLMCREEGIH

Query:  NEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNK
        N     SVLS   + E ++ G+ +H L++K G+    +V NALV MYAKC    DA   FE   +K+ + W+++I+G++Q G  HEAL LF  M+     
Subjt:  NEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNK

Query:  PSEFTFVGVINACSDIGALGEGKQMHGYSLKMGY--ESQIFIMTALVD
        P+  T   + +AC+ +G+L  G  +H YS+K+G+   S + + TAL+D
Subjt:  PSEFTFVGVINACSDIGALGEGKQMHGYSLKMGY--ESQIFIMTALVD

AT2G33680.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.9e-10152.1Show/hide
Query:  LLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGP-AGSPLVMEIFQRM
        L P   +    L  ++  ++L  G+A+H Q++RTG+ + +  AN LVN YAKCG L KA  IF +I  KDVVSWN LI GYSQ G  + S  VM++F+ M
Subjt:  LLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGP-AGSPLVMEIFQRM

Query:  RAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLL
        RA++ LPNA+T AG+F A SS   ++ G QAHAL +K SSF D++V +SL+ MYCK G + D  KVF  +PERN+ +W+TM+SGYA + +  EA  +F L
Subjt:  RAENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLL

Query:  MCR--EEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKL
          R  EEG  +++++T+VLS+L     V  G+QIHC+ +KNGLL  V++ NALVTMY+KC  L++A K F+ SGD+NSITWSAM+TGY+Q G+S EA+KL
Subjt:  MCR--EEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKL

Query:  FSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDI
        FS M   G KPSE+T VGV+NACSDI  L EGKQ+H + LK+G+E  +F  TALVD+
Subjt:  FSYMHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDI

AT2G34400.1 Pentatricopeptide repeat (PPR-like) superfamily protein3.6e-5134.6Show/hide
Query:  LKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMRAENTLPNAHTFAGVFTA
        L+++  G+++H+ L + G    V++ +SL+ +YAKCG +  A+ +F+ IT +D VSWN +I+GYS+ G A     M++F++M  E   P+  T   +  A
Subjt:  LKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMRAENTLPNAHTFAGVFTA

Query:  ASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLMCREEGIHNEFIYTSVLS
         S   +   G     +AI        F+GS L++MY K G L  AR+VF+++ +++ V+W  MI+ Y+   K+ EA+ LF  M +     +    ++VLS
Subjt:  ASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLMCREEGIHNEFIYTSVLS

Query:  ALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVI
        A      ++ GKQI   A +  L   + V   LV MY KC  +++AL+ FE    KN  TW+AMIT YA  G + EAL LF  M      PS+ TF+GV+
Subjt:  ALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVI

Query:  NACSDIGALGEG-KQMHGYSLKMGYESQIFIMTALVDICSQ
        +AC   G + +G +  H  S   G   +I   T ++D+ S+
Subjt:  NACSDIGALGEG-KQMHGYSLKMGYESQIFIMTALVDICSQ

AT3G24000.1 Tetratricopeptide repeat (TPR)-like superfamily protein7.0e-5533.33Show/hide
Query:  LPQHRSFFNSLL-QYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMR
        +P  R F+N+LL + T  K L +G+ +HA +L++     + + N+L+N+YAKCGSL +A+ +FE +  +D V+W  LI+GYSQ       L+   F +M 
Subjt:  LPQHRSFFNSLL-QYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMR

Query:  AENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLM
             PN  T + V  AA++      G Q H   +K     +V VGS+LL++Y + G + DA+ VFD +  RN VSW  +I+G+A +    +A  LF  M
Subjt:  AENTLPNAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLM

Query:  CREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSY
         R+    + F Y S+  A +    ++ GK +H   +K+G   V   GN L+ MYAK   + DA K F+    ++ ++W++++T YAQ G   EA+  F  
Subjt:  CREEGIHNEFIYTSVLSALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSY

Query:  MHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQ----GRTIPVINKFP
        M   G +P+E +F+ V+ ACS  G L EG   +    K G   + +    +VD+  +     R +  I + P
Subjt:  MHFNGNKPSEFTFVGVINACSDIGALGEGKQMHGYSLKMGYESQIFIMTALVDICSQ----GRTIPVINKFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTTCTTCTTCTTCCTCAGCATCGCTCCTTCTTCAATTCTCTCTTACAGTATACCAATCTAAAAGATTTACAGAAGGGGAAGGCCATTCACGCTCAACTCCTCAG
AACCGGTTCCTTCTCCTCAGTTTACCTCGCCAATAGCCTCGTTAATTTGTACGCCAAGTGCGGAAGCCTTGTGAAGGCCAAGCTCATCTTCGAGAGTATAACCAACAAAG
ACGTGGTTTCATGGAATTGCCTCATCAATGGCTACTCTCAACAGGGTCCCGCGGGATCTCCGTTGGTAATGGAGATTTTTCAGAGAATGAGGGCGGAGAACACTCTGCCC
AATGCCCACACTTTTGCCGGTGTTTTCACCGCTGCTTCAAGTTCGCCCGAAACTTCGGGTGGCCTTCAGGCCCATGCGCTTGCGATCAAGACTTCTAGCTTTTATGATGT
TTTTGTTGGCAGTTCGCTTCTCAATATGTACTGCAAAATTGGGTGTCTGCTGGATGCTCGTAAGGTGTTCGACAGAATTCCGGAGAGAAATTCTGTTTCTTGGGCTACTA
TGATTTCGGGGTATGCGATGCAAAGGAAGGCTCTCGAGGCTTGGGGGCTGTTCTTATTGATGTGTCGTGAAGAGGGGATTCATAATGAGTTTATCTATACCAGTGTACTT
AGTGCACTGACGGTTCCTGAGCTTGTTGACCATGGTAAGCAAATTCACTGTCTTGCCCTTAAAAATGGGTTGTTATCAGTTGTTTCTGTAGGGAACGCTCTTGTTACGAT
GTATGCTAAATGTAGGTGTTTAGATGATGCGCTTAAGACATTTGAATTTTCTGGTGATAAGAACTCTATTACATGGTCAGCTATGATAACTGGCTATGCGCAGGCTGGGG
ACTCGCATGAGGCTTTAAAGTTGTTTTCATATATGCATTTTAATGGGAATAAGCCTAGTGAGTTTACTTTTGTTGGGGTGATCAATGCTTGTAGTGACATAGGTGCTCTG
GGGGAAGGAAAACAAATGCATGGATATTCCCTGAAGATGGGATATGAATCCCAGATTTTCATAATGACAGCTTTGGTTGATATATGTAGCCAAGGCAGAACCATCCCTGT
AATAAACAAATTCCCTGATGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTTCTTCTTCTTCCTCAGCATCGCTCCTTCTTCAATTCTCTCTTACAGTATACCAATCTAAAAGATTTACAGAAGGGGAAGGCCATTCACGCTCAACTCCTCAG
AACCGGTTCCTTCTCCTCAGTTTACCTCGCCAATAGCCTCGTTAATTTGTACGCCAAGTGCGGAAGCCTTGTGAAGGCCAAGCTCATCTTCGAGAGTATAACCAACAAAG
ACGTGGTTTCATGGAATTGCCTCATCAATGGCTACTCTCAACAGGGTCCCGCGGGATCTCCGTTGGTAATGGAGATTTTTCAGAGAATGAGGGCGGAGAACACTCTGCCC
AATGCCCACACTTTTGCCGGTGTTTTCACCGCTGCTTCAAGTTCGCCCGAAACTTCGGGTGGCCTTCAGGCCCATGCGCTTGCGATCAAGACTTCTAGCTTTTATGATGT
TTTTGTTGGCAGTTCGCTTCTCAATATGTACTGCAAAATTGGGTGTCTGCTGGATGCTCGTAAGGTGTTCGACAGAATTCCGGAGAGAAATTCTGTTTCTTGGGCTACTA
TGATTTCGGGGTATGCGATGCAAAGGAAGGCTCTCGAGGCTTGGGGGCTGTTCTTATTGATGTGTCGTGAAGAGGGGATTCATAATGAGTTTATCTATACCAGTGTACTT
AGTGCACTGACGGTTCCTGAGCTTGTTGACCATGGTAAGCAAATTCACTGTCTTGCCCTTAAAAATGGGTTGTTATCAGTTGTTTCTGTAGGGAACGCTCTTGTTACGAT
GTATGCTAAATGTAGGTGTTTAGATGATGCGCTTAAGACATTTGAATTTTCTGGTGATAAGAACTCTATTACATGGTCAGCTATGATAACTGGCTATGCGCAGGCTGGGG
ACTCGCATGAGGCTTTAAAGTTGTTTTCATATATGCATTTTAATGGGAATAAGCCTAGTGAGTTTACTTTTGTTGGGGTGATCAATGCTTGTAGTGACATAGGTGCTCTG
GGGGAAGGAAAACAAATGCATGGATATTCCCTGAAGATGGGATATGAATCCCAGATTTTCATAATGACAGCTTTGGTTGATATATGTAGCCAAGGCAGAACCATCCCTGT
AATAAACAAATTCCCTGATGGCTGA
Protein sequenceShow/hide protein sequence
MSLLLLPQHRSFFNSLLQYTNLKDLQKGKAIHAQLLRTGSFSSVYLANSLVNLYAKCGSLVKAKLIFESITNKDVVSWNCLINGYSQQGPAGSPLVMEIFQRMRAENTLP
NAHTFAGVFTAASSSPETSGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWATMISGYAMQRKALEAWGLFLLMCREEGIHNEFIYTSVL
SALTVPELVDHGKQIHCLALKNGLLSVVSVGNALVTMYAKCRCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINACSDIGAL
GEGKQMHGYSLKMGYESQIFIMTALVDICSQGRTIPVINKFPDG