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MS026942 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026942
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S ribosomal protein L31
Genome locationscaffold9_2:465478..467039
RNA-Seq ExpressionMS026942
SyntenyMS026942
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000054 - Ribosomal protein L31e
IPR020052 - Ribosomal protein L31e, conserved site
IPR023621 - Ribosomal protein L31e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019186697.1 PREDICTED: 60S ribosomal protein L31 [Ipomoea nil]1.4e-3489.29Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        MA+K +KARK EVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRR+RVRIA++
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

XP_022152572.1 60S ribosomal protein L31 [Momordica charantia]3.1e-3798.81Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQ+
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

XP_023525745.1 60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo]1.7e-3595.24Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAP AIKELRKFAQ AMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIA++
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

XP_031110863.1 60S ribosomal protein L31 [Ipomoea triloba]4.9e-3590.48Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        MADK +KARK EVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRR+RVRIA++
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

XP_038903425.1 60S ribosomal protein L31 [Benincasa hispida]2.9e-3595.24Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAP AIKELRKFAQKAMGTTDVRVDVKLNK+IWSRGIRSVPRRVRVRIA++
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

TrEMBL top hitse value%identityAlignment
A0A2N9IJ95 Uncharacterized protein9.1e-3589.29Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        MADK  K RK EVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVR+A++
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

A0A6A1WHM5 60S ribosomal protein L314.5e-3488.1Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        M +K+ K RK EVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIA++
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

A0A6J1DGM1 60S ribosomal protein L311.5e-3798.81Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQ+
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

A0A6J5TVC8 Uncharacterized protein2.0e-3488.1Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        MADK  K RK EVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFA+KAMGTTDVRVDVKLNKHIWSRGIRSVPRR+RVRIA++
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

M5XE71 Uncharacterized protein5.9e-3486.9Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        MA+K  K RK EVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFA+KAMGTTDVRVDVKLNKHIWSRGIRSVPRR+RVRIA++
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

SwissProt top hitse value%identityAlignment
O65071 60S ribosomal protein L311.7e-3075.31Show/hide
Query:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        +  K+R++EV TREYT+NLH+RLHGCTFKK AP A+KE+RKFAQKAMGTTDVR+DVKLNK +WSRGIRSVPRR+RVRI+++
Subjt:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

P46290 60S ribosomal protein L318.2e-3384.52Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        M+DK+ K RK EVVTREYT+NLHKRLH CTFKKKAP AIKE+RKFAQKAMGT DVRVDVKLNK IWSRGIRSVPRRVRVRIA++
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

Q9M573 60S ribosomal protein L313.6e-3686.9Show/hide
Query:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        MADK +K RK EVV+REYT+NLHKRLHGCTFKKKAP AIKE+RKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRR+RVRIA++
Subjt:  MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

Q9MAV7 60S ribosomal protein L311.3e-3386.42Show/hide
Query:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        +  K RK EVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGT DVRVDVKLNK IWSRGIRSVPRRVRVRIA++
Subjt:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

Q9SLL7 60S ribosomal protein L31-15.0e-3076.54Show/hide
Query:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        +  K RK EVVTREYT+NLH+RLH CTFKKKAPNAIKE+RKFA KAMGT DVRVDVKLNK IWS+GIR  PRR+RVR+A++
Subjt:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

Arabidopsis top hitse value%identityAlignment
AT2G19740.1 Ribosomal protein L31e family protein3.5e-3176.54Show/hide
Query:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        +  K RK EVVTREYT+NLH+RLH CTFKKKAPNAIKE+RKFA KAMGT DVRVDVKLNK IWS+GIR  PRR+RVR+A++
Subjt:  KSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

AT4G26230.1 Ribosomal protein L31e family protein3.0e-3076.92Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        K RK EVVTREYT+NLH+RLH CTFKKKAP AIKE+RKFA+K MGT DVRVDVKLNK IWS+GIR  PRR+RVR+A++
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

AT5G56710.1 Ribosomal protein L31e family protein1.8e-3076.92Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ
        K RK EV+TREYT+NLH+RLH CTFKKKAP AIKE+RKFA+KAMGT DVRVDVKLNK IWS+GIR  PRR+RVR+A++
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ

AT5G56710.2 Ribosomal protein L31e family protein3.1e-1980.77Show/hide
Query:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVD
        K RK EV+TREYT+NLH+RLH CTFKKKAP AIKE+RKFA+KAMGT DVRVD
Subjt:  KARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACAAGTCGGCCAAGGCAAGAAAGAGCGAGGTCGTCACCAGGGAGTACACCGTTAATCTCCACAAGCGCCTGCACGGATGCACATTCAAGAAGAAGGCACCAAA
TGCTATAAAGGAACTCAGAAAATTTGCTCAGAAGGCTATGGGTACCACTGATGTTAGAGTCGACGTGAAACTTAACAAGCATATATGGAGTCGTGGAATTAGGAGTGTGC
CTAGGAGGGTCCGTGTCCGCATTGCACAACAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACAAGTCGGCCAAGGCAAGAAAGAGCGAGGTCGTCACCAGGGAGTACACCGTTAATCTCCACAAGCGCCTGCACGGATGCACATTCAAGAAGAAGGCACCAAA
TGCTATAAAGGAACTCAGAAAATTTGCTCAGAAGGCTATGGGTACCACTGATGTTAGAGTCGACGTGAAACTTAACAAGCATATATGGAGTCGTGGAATTAGGAGTGTGC
CTAGGAGGGTCCGTGTCCGCATTGCACAACAGTGA
Protein sequenceShow/hide protein sequence
MADKSAKARKSEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIAQQ