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MS026960 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026960
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCox19-like CHCH family protein
Genome locationscaffold1407:153102..153802
RNA-Seq ExpressionMS026960
SyntenyMS026960
Gene Ontology termsNA
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042698.1 Cox19-like CHCH family protein [Cucumis melo var. makuwa]1.4e-1777.14Show/hide
Query:  MDETQAQAQAPAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKK
        MDE Q       QPVCAQEAL+LLNCV ESPFDQ+KC RLLHSLRECVLSKKVKKFSLA+EEQ KP  KK
Subjt:  MDETQAQAQAPAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKK

KAE8056054.1 hypothetical protein FH972_012852 [Carpinus fangiana]7.4e-1676.56Show/hide
Query:  APAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQ--AKPSKKKA
        A +QPVCAQEALDLLNCVA+SP+DQ+KC RLL SLRECVL+KKVKKFSLAD+ Q  AKP+ K+A
Subjt:  APAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQ--AKPSKKKA

KAF4354778.1 hypothetical protein F8388_017982 [Cannabis sativa]1.7e-1571.43Show/hide
Query:  MDETQAQAQAPAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKK
        M+++ A A + AQPVCAQEALDLLNCV +SP+DQ+KC RLL+SLR+CVL+KKVKKFS+AD+E AKPS KK
Subjt:  MDETQAQAQAPAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKK

KAG6606053.1 hypothetical protein SDJN03_03370, partial [Cucurbita argyrosperma subsp. sororia]5.5e-1987.1Show/hide
Query:  APAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKKA
        A AQPVCAQEALDLLNCV +SPFDQEKC RLLHSLRECVLSKKVKKFSLADEE+AK S KK+
Subjt:  APAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKKA

KGN50036.1 hypothetical protein Csa_000619 [Cucumis sativus]7.9e-1878.57Show/hide
Query:  MDETQAQAQAPAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKK
        MDE Q       QPVCAQEAL+LLNCV ESPFDQEKC RLLHSLRECVLSKKVKKFSLA+EEQ KP  KK
Subjt:  MDETQAQAQAPAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKK

TrEMBL top hitse value%identityAlignment
A0A0A0KQS7 Uncharacterized protein3.8e-1878.57Show/hide
Query:  MDETQAQAQAPAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKK
        MDE Q       QPVCAQEAL+LLNCV ESPFDQEKC RLLHSLRECVLSKKVKKFSLA+EEQ KP  KK
Subjt:  MDETQAQAQAPAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKK

A0A5D3C4E2 Cox19-like CHCH family protein6.5e-1877.14Show/hide
Query:  MDETQAQAQAPAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKK
        MDE Q       QPVCAQEAL+LLNCV ESPFDQ+KC RLLHSLRECVLSKKVKKFSLA+EEQ KP  KK
Subjt:  MDETQAQAQAPAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKK

A0A5N6R867 Uncharacterized protein3.6e-1676.56Show/hide
Query:  APAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQ--AKPSKKKA
        A +QPVCAQEALDLLNCVA+SP+DQ+KC RLL SLRECVL+KKVKKFSLAD+ Q  AKP+ K+A
Subjt:  APAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQ--AKPSKKKA

A0A7J6E8K7 Uncharacterized protein8.0e-1671.43Show/hide
Query:  MDETQAQAQAPAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKK
        M+++ A A + AQPVCAQEALDLLNCV +SP+DQ+KC RLL+SLR+CVL+KKVKKFS+AD+E AKPS KK
Subjt:  MDETQAQAQAPAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKK

A0A803PNU7 Uncharacterized protein8.0e-1671.43Show/hide
Query:  MDETQAQAQAPAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKK
        M+++ A A + AQPVCAQEALDLLNCV +SP+DQ+KC RLL+SLR+CVL+KKVKKFS+AD+E AKPS KK
Subjt:  MDETQAQAQAPAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G23760.1 Cox19-like CHCH family protein1.2e-1678Show/hide
Query:  QPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEE
        QP+C QEAL LLNCVAESPFDQEKC R L SLRECVLSKKVKKFS+  ++
Subjt:  QPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAACTCAAGCTCAAGCTCAAGCTCCGGCTCAGCCGGTTTGCGCTCAGGAAGCTCTCGATCTGCTGAATTGCGTTGCGGAGTCACCGTTCGATCAAGAGAAATG
CAACCGTCTTCTTCATTCTTTGCGAGAATGCGTGCTCAGTAAGAAAGTGAAGAAGTTCTCTCTGGCCGACGAAGAACAGGCAAAACCATCCAAGAAGAAGGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAACTCAAGCTCAAGCTCAAGCTCCGGCTCAGCCGGTTTGCGCTCAGGAAGCTCTCGATCTGCTGAATTGCGTTGCGGAGTCACCGTTCGATCAAGAGAAATG
CAACCGTCTTCTTCATTCTTTGCGAGAATGCGTGCTCAGTAAGAAAGTGAAGAAGTTCTCTCTGGCCGACGAAGAACAGGCAAAACCATCCAAGAAGAAGGCGTGA
Protein sequenceShow/hide protein sequence
MDETQAQAQAPAQPVCAQEALDLLNCVAESPFDQEKCNRLLHSLRECVLSKKVKKFSLADEEQAKPSKKKA