; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027064 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027064
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold442:91686..95347
RNA-Seq ExpressionMS027064
SyntenyMS027064
Gene Ontology termsNA
InterPro domainsIPR004252 - Probable transposase, Ptta/En/Spm, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW51303.1 hypothetical protein CK203_075479 [Vitis vinifera]1.9e-1333.73Show/hide
Query:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEGR-
        Q+ + Y C   R    + + +SA N  +R K+PF+HR G +SF+ H      E+G  +   ELF   H      W N+ A+  YEKM+ L  Q   EG  
Subjt:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEGR-

Query:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL
         ++E +  E  LG++S Y KG+G+GP    P S   S   S E  + LE R+   + L+ +Q+++L
Subjt:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL

RVW66347.1 hypothetical protein CK203_065231 [Vitis vinifera]1.9e-1333.73Show/hide
Query:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEGR-
        Q+ + Y C   R    + + +SA N  +R K+PF+HR G +SF+ H      E+G  +   ELF   H      W N+ A+  YEKM+ L  Q   EG  
Subjt:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEGR-

Query:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL
         ++E +  E  LG++S Y KG+G+GP    P S   S   S E  + LE R+   + L+ +Q+++L
Subjt:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL

RVX04821.1 hypothetical protein CK203_024979 [Vitis vinifera]6.4e-1433.73Show/hide
Query:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEGR-
        Q+ + Y C   R    + + +SA N  +R K+PF+HR G +SF+ H      E+G  +   ELF   H      W N+ A+  YEKM+ L  Q   EG  
Subjt:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEGR-

Query:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL
         ++E +  E  LG++S Y KG+G+GP    P S   S   S E+ + LE R+   + L+ +Q+++L
Subjt:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL

XP_034708948.1 uncharacterized protein LOC117932000 [Vitis riparia]1.1e-1336.49Show/hide
Query:  QAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQ-AKEEGRELSEEDAMEMALGKRSSY
        Q +S  N  +R KLPF HR G +SF+ H E+  +  G      ELF   H      W N+ A+ SYEKM+ L +Q   E G+ L E +     LG RS Y
Subjt:  QAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQ-AKEEGRELSEEDAMEMALGKRSSY

Query:  TKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL
         KG+G+GP    PPS  + +       + LE  +    ELL+SQ   +
Subjt:  TKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL

XP_038895319.1 uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida]5.4e-2145.71Show/hide
Query:  YRYNCSDK-----RLWQLDS-QAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEE
        Y+Y  +D        W+  S + KSA+NK SR K+ FNH  G KSFLS R DK KEDGTY+S  E+FY THC  +K W ++AA+ +YE M+ L +  K +
Subjt:  YRYNCSDK-----RLWQLDS-QAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEE

Query:  GRELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSA
            ++E+ + M LGKRSSY  G GYGP    PP +K ++
Subjt:  GRELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSA

TrEMBL top hitse value%identityAlignment
A0A438CMH8 Uncharacterized protein9.1e-1433.13Show/hide
Query:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEGR-
        Q+ + Y C   R    + + +SA N  +R K+PF+H+ G +SF+ H      E+G  +   ELF   H      W N+ A+  YEKM+ L  Q   EG  
Subjt:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEGR-

Query:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL
         ++E +  E  LG++S Y KG+G+GP    P S   S   S E+ + LE R+   + L+ +Q+++L
Subjt:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL

A0A438EUC9 Uncharacterized protein9.1e-1433.73Show/hide
Query:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEGR-
        Q+ + Y C   R    + + +SA N  +R K+PF+HR G +SF+ H      E+G  +   ELF   H      W N+ A+  YEKM+ L  Q   EG  
Subjt:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEGR-

Query:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL
         ++E +  E  LG++S Y KG+G+GP    P S   S   S E  + LE R+   + L+ +Q+++L
Subjt:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL

A0A438G2C0 Uncharacterized protein9.1e-1433.73Show/hide
Query:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEGR-
        Q+ + Y C   R    + + +SA N  +R K+PF+HR G +SF+ H      E+G  +   ELF   H      W N+ A+  YEKM+ L  Q   EG  
Subjt:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEGR-

Query:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL
         ++E +  E  LG++S Y KG+G+GP    P S   S   S E  + LE R+   + L+ +Q+++L
Subjt:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL

A0A438GRP1 Uncharacterized protein1.2e-1333.13Show/hide
Query:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEG-R
        Q+ + Y C   R    + + +SA N  +R K+PF+HR G +SF+ H      E+G  +   ELF   H      W N+ A+  YEKM+ L  Q   EG  
Subjt:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEG-R

Query:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL
         ++E +  E  LG++  Y KG+G+GP    P S   S   S E+ + LE R+   + L+ +Q+++L
Subjt:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL

A0A438J796 Uncharacterized protein3.1e-1433.73Show/hide
Query:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEGR-
        Q+ + Y C   R    + + +SA N  +R K+PF+HR G +SF+ H      E+G  +   ELF   H      W N+ A+  YEKM+ L  Q   EG  
Subjt:  QDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYEKMVALVEQAKEEGR-

Query:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL
         ++E +  E  LG++S Y KG+G+GP    P S   S   S E+ + LE R+   + L+ +Q+++L
Subjt:  ELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGATGCAGGATTCTGCCGAGCTACTGAAGGTCGTCCACGTGGTAACGAGGATGAATTGGCAAGGTAGGGGACAAGACCGTTACCGTTACAATTGCTCCGACAAGCG
GTTGTGGCAGTTGGACTCCCAGGCAAAATCAGCGAAAAACAAAGCAAGTAGATGTAAACTCCCATTTAATCATCGGGCTGGACCGAAATCATTTCTCTCGCATCGGGAAG
ATAAGAAAAAAGAAGATGGGACATATTTGAGCCCCTTTGAGCTTTTTTACGCGACACATTGTCATCCGACAAAGGCTTGGACCAACGAAGCTGCTCAAACTTCATATGAG
AAAATGGTGGCCTTAGTAGAACAGGCAAAAGAAGAAGGTCGAGAATTAAGTGAAGAAGATGCTATGGAAATGGCCCTCGGGAAAAGATCATCATACACTAAAGGGATGGG
ATATGGTCCGAANGATATGGTCCCACCGAGTAAAAAAACGTCGGCAGGATGCTCACAAGAATACGTTCTCACATTGGAGGCCAGAGTTGCAAGAAATGAAGAATTATTAC
GAAGCCAACGAGAGGAATTATTATATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGATGCAGGATTCTGCCGAGCTACTGAAGGTCGTCCACGTGGTAACGAGGATGAATTGGCAAGGTAGGGGACAAGACCGTTACCGTTACAATTGCTCCGACAAGCG
GTTGTGGCAGTTGGACTCCCAGGCAAAATCAGCGAAAAACAAAGCAAGTAGATGTAAACTCCCATTTAATCATCGGGCTGGACCGAAATCATTTCTCTCGCATCGGGAAG
ATAAGAAAAAAGAAGATGGGACATATTTGAGCCCCTTTGAGCTTTTTTACGCGACACATTGTCATCCGACAAAGGCTTGGACCAACGAAGCTGCTCAAACTTCATATGAG
AAAATGGTGGCCTTAGTAGAACAGGCAAAAGAAGAAGGTCGAGAATTAAGTGAAGAAGATGCTATGGAAATGGCCCTCGGGAAAAGATCATCATACACTAAAGGGATGGG
ATATGGTCCGAANGATATGGTCCCACCGAGTAAAAAAACGTCGGCAGGATGCTCACAAGAATACGTTCTCACATTGGAGGCCAGAGTTGCAAGAAATGAAGAATTATTAC
GAAGCCAACGAGAGGAATTATTATATTAG
Protein sequenceShow/hide protein sequence
MLMQDSAELLKVVHVVTRMNWQGRGQDRYRYNCSDKRLWQLDSQAKSAKNKASRCKLPFNHRAGPKSFLSHREDKKKEDGTYLSPFELFYATHCHPTKAWTNEAAQTSYE
KMVALVEQAKEEGRELSEEDAMEMALGKRSSYTKGMGYGPXDMVPPSKKTSAGCSQEYVLTLEARVARNEELLRSQREELLY