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MS027067 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027067
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAgglutinin domain-containing protein
Genome locationscaffold442:191152..192237
RNA-Seq ExpressionMS027067
SyntenyMS027067
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008998 - Agglutinin domain
IPR036242 - Agglutinin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157620.1 uncharacterized protein LOC111024281 isoform X1 [Momordica charantia]7.8e-0945.45Show/hide
Query:  EEKRVEAEYPKKMEEEAKSRADG-NKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNRYLVPKS
        EE+ +E  Y    ++E     DG N  P++F LKS HN  YL YIN +D +   G L+F+  ++ SPYTKFE  YS + + Y HIRCCY NN+Y V +S
Subjt:  EEKRVEAEYPKKMEEEAKSRADG-NKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNRYLVPKS

XP_022157621.1 uncharacterized protein LOC111024281 isoform X2 [Momordica charantia]7.8e-0945.45Show/hide
Query:  EEKRVEAEYPKKMEEEAKSRADG-NKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNRYLVPKS
        EE+ +E  Y    ++E     DG N  P++F LKS HN  YL YIN +D +   G L+F+  ++ SPYTKFE  YS + + Y HIRCCY NN+Y V +S
Subjt:  EEKRVEAEYPKKMEEEAKSRADG-NKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNRYLVPKS

XP_022157622.1 uncharacterized protein LOC111024282 [Momordica charantia]7.1e-1043.88Show/hide
Query:  EKRVEAEYPKKMEEEAKSRADGNK-FPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNRYLVPKS
        E+++E +Y K  ++E     DG K  P++F LKS HN  YL YIN  D++   G L F+  +M SPYTKFE  +S + + Y H+RCC+ NN+Y V +S
Subjt:  EKRVEAEYPKKMEEEAKSRADGNK-FPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNRYLVPKS

XP_022157623.1 uncharacterized protein LOC111024284 [Momordica charantia]5.6e-3167.31Show/hide
Query:  MLDGVLSMVAEEKRVEAEYPKKMEEEAKSRADGNKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECYHIRCCYNNN
        MLDGV +M AEE   EA+Y ++MEEE K+   GNKFP+ F +KSSHNDKYL YINY  NESFDG+LQFT  +M SPYTKFEFV+S ++ C+HIRCCY NN
Subjt:  MLDGVLSMVAEEKRVEAEYPKKMEEEAKSRADGNKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECYHIRCCYNNN

Query:  RYLV
        RYLV
Subjt:  RYLV

XP_022157623.1 uncharacterized protein LOC111024284 [Momordica charantia]3.1e-0566.67Show/hide
Query:  GNDRFCVITSGYFNDCLNVDSSLLTSQAYMEVEELVASRTID
        GNDRFCV ++  + DCLN D+SLL+S A+MEVEE V SRTID
Subjt:  GNDRFCVITSGYFNDCLNVDSSLLTSQAYMEVEELVASRTID

XP_022157623.1 uncharacterized protein LOC111024284 [Momordica charantia]1.7e-1955.34Show/hide
Query:  GVLSMVAEEKRVEAEYPKKMEEEAKSRADGNK-FPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNR
        G L    EE+R+EA Y ++ E E ++R DG+   P+HF +KS +NDKYL Y++Y D++ FDGLLQFT ++M SPYTKFE  YS I + Y  IRCCY NNR
Subjt:  GVLSMVAEEKRVEAEYPKKMEEEAKSRADGNK-FPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNR

Query:  YLV
        YLV
Subjt:  YLV

TrEMBL top hitse value%identityAlignment
A0A6J1DTL3 uncharacterized protein LOC111024281 isoform X13.8e-0945.45Show/hide
Query:  EEKRVEAEYPKKMEEEAKSRADG-NKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNRYLVPKS
        EE+ +E  Y    ++E     DG N  P++F LKS HN  YL YIN +D +   G L+F+  ++ SPYTKFE  YS + + Y HIRCCY NN+Y V +S
Subjt:  EEKRVEAEYPKKMEEEAKSRADG-NKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNRYLVPKS

A0A6J1DTU6 uncharacterized protein LOC1110242842.7e-3167.31Show/hide
Query:  MLDGVLSMVAEEKRVEAEYPKKMEEEAKSRADGNKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECYHIRCCYNNN
        MLDGV +M AEE   EA+Y ++MEEE K+   GNKFP+ F +KSSHNDKYL YINY  NESFDG+LQFT  +M SPYTKFEFV+S ++ C+HIRCCY NN
Subjt:  MLDGVLSMVAEEKRVEAEYPKKMEEEAKSRADGNKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECYHIRCCYNNN

Query:  RYLV
        RYLV
Subjt:  RYLV

A0A6J1DTU6 uncharacterized protein LOC1110242841.5e-0566.67Show/hide
Query:  GNDRFCVITSGYFNDCLNVDSSLLTSQAYMEVEELVASRTID
        GNDRFCV ++  + DCLN D+SLL+S A+MEVEE V SRTID
Subjt:  GNDRFCVITSGYFNDCLNVDSSLLTSQAYMEVEELVASRTID

A0A6J1DTU6 uncharacterized protein LOC1110242848.1e-2055.34Show/hide
Query:  GVLSMVAEEKRVEAEYPKKMEEEAKSRADGNK-FPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNR
        G L    EE+R+EA Y ++ E E ++R DG+   P+HF +KS +NDKYL Y++Y D++ FDGLLQFT ++M SPYTKFE  YS I + Y  IRCCY NNR
Subjt:  GVLSMVAEEKRVEAEYPKKMEEEAKSRADGNK-FPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNR

Query:  YLV
        YLV
Subjt:  YLV

A0A6J1DUY9 uncharacterized protein LOC1110242823.4e-1043.88Show/hide
Query:  EKRVEAEYPKKMEEEAKSRADGNK-FPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNRYLVPKS
        E+++E +Y K  ++E     DG K  P++F LKS HN  YL YIN  D++   G L F+  +M SPYTKFE  +S + + Y H+RCC+ NN+Y V +S
Subjt:  EKRVEAEYPKKMEEEAKSRADGNK-FPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNRYLVPKS

A0A6J1DYR0 uncharacterized protein LOC111024281 isoform X23.8e-0945.45Show/hide
Query:  EEKRVEAEYPKKMEEEAKSRADG-NKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNRYLVPKS
        EE+ +E  Y    ++E     DG N  P++F LKS HN  YL YIN +D +   G L+F+  ++ SPYTKFE  YS + + Y HIRCCY NN+Y V +S
Subjt:  EEKRVEAEYPKKMEEEAKSRADG-NKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECY-HIRCCYNNNRYLVPKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGATGGGGTACTTTCAATGGTGGCAGAGGAGAAAAGGGTGGAAGCCGAGTACCCAAAGAAGATGGAGGAAGAAGCAAAGAGCCGTGCCGATGGCAACAAATTCCC
CAAGCATTTCGACCTCAAATCCAGCCACAACGACAAGTACCTCCACTACATAAACTACCACGACAACGAATCATTTGATGGTCTTCTCCAATTCACCAGCGATAAAATGA
CAAGCCCATACACCAAGTTCGAATTCGTGTATTCCGGCATCGAAGAATGCTACCACATAAGATGCTGTTACAACAACAACAGATATTTGGTCCCGAAGTCCCCAACATTC
CCAATGCAGCCTATCCCTATGGAGATCCTAATTATAAGCAATCGCTGGCAAACATTGTGGATTGGGACTCCATCTGTATACTACCGAGGTAACGATCGTTTTTGCGTGAT
AACCAGCGGCTACTTTAACGATTGTCTTAATGTCGATTCGAGTTTGCTTACGAGCCAGGCGTACATGGAAGTAGAAGAGCTCGTAGCCTCGCGGACCATTGATAATATGG
TGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGATGGGGTACTTTCAATGGTGGCAGAGGAGAAAAGGGTGGAAGCCGAGTACCCAAAGAAGATGGAGGAAGAAGCAAAGAGCCGTGCCGATGGCAACAAATTCCC
CAAGCATTTCGACCTCAAATCCAGCCACAACGACAAGTACCTCCACTACATAAACTACCACGACAACGAATCATTTGATGGTCTTCTCCAATTCACCAGCGATAAAATGA
CAAGCCCATACACCAAGTTCGAATTCGTGTATTCCGGCATCGAAGAATGCTACCACATAAGATGCTGTTACAACAACAACAGATATTTGGTCCCGAAGTCCCCAACATTC
CCAATGCAGCCTATCCCTATGGAGATCCTAATTATAAGCAATCGCTGGCAAACATTGTGGATTGGGACTCCATCTGTATACTACCGAGGTAACGATCGTTTTTGCGTGAT
AACCAGCGGCTACTTTAACGATTGTCTTAATGTCGATTCGAGTTTGCTTACGAGCCAGGCGTACATGGAAGTAGAAGAGCTCGTAGCCTCGCGGACCATTGATAATATGG
TGTAA
Protein sequenceShow/hide protein sequence
MLDGVLSMVAEEKRVEAEYPKKMEEEAKSRADGNKFPKHFDLKSSHNDKYLHYINYHDNESFDGLLQFTSDKMTSPYTKFEFVYSGIEECYHIRCCYNNNRYLVPKSPTF
PMQPIPMEILIISNRWQTLWIGTPSVYYRGNDRFCVITSGYFNDCLNVDSSLLTSQAYMEVEELVASRTIDNMV