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MS027134 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027134
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEnzymatic polyprotein
Genome locationscaffold9_1:701363..701875
RNA-Seq ExpressionMS027134
SyntenyMS027134
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037876.1 zf-CCHC domain-containing protein/MP domain-containing protein [Cucumis melo var. makuwa]9.6e-4659.36Show/hide
Query:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM
        MSSR S SS  +S ++   + +RSES+RASVDF+H IPDV Y  E+GSLSPTQSDMERR+E  +NQINVIS  ++R  E YS YID WI AP ETRKP +
Subjt:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM

Query:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV
        T+ DF   + + E  KNEAL KKLQADGQVA+I+  TVWVTA GKE+AS +PPEEEA FSH                 EDKVQKVGV
Subjt:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV

KAA0056776.1 Enzymatic polyprotein [Cucumis melo var. makuwa]3.3e-4658.82Show/hide
Query:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM
        MSSR S SS  +S ++   + +RSES+RASVDF+H IPD+ Y  E+GSLSPTQSDMERR+E  +NQINVIS  ++R+ E YS YID WI AP ETRKP +
Subjt:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM

Query:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV
        T+ DF   + + E  KNEAL KKLQADGQVA+I+  TVWVTA GKE+AS +PPEEEA FSH                 EDKVQKVGV
Subjt:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV

KAA0059217.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.5e-4659.36Show/hide
Query:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM
        MSSR S SS  +S ++   + +RSES+RASVDF+H IPDV Y  E+GSLSPTQSDMERR+E  +NQINVIS  ++R+ E YS YID WI AP ETRKP +
Subjt:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM

Query:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV
        T+ DF   + + E  KNEAL KKLQADGQVA+I+  TVWVTA GKE+AS +PPEEEA FSH                 EDKVQKVGV
Subjt:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV

TYJ97599.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.5e-4659.36Show/hide
Query:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM
        MSSR S SS  +S ++   + +RSES+RASVDF+H IPDV Y  E+GSLSPTQSDMERR+E  +NQINVIS  ++R+ E YS YID WI AP ETRKP +
Subjt:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM

Query:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV
        T+ DF   + + E  KNEAL KKLQADGQVA+I+  TVWVTA GKE+AS +PPEEEA FSH                 EDKVQKVGV
Subjt:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV

TYK01213.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.8e-4557.67Show/hide
Query:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPE--KRYEELYSKYIDMWIAAPKETRKP
        MSSR S SS ARS S+   + +RSES+RAS+DF+  IP V Y  E+ SLSPTQSDMERRTE  +NQINVIS  E   R++E YSKY+DMW+AAP ETRKP
Subjt:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPE--KRYEELYSKYIDMWIAAPKETRKP

Query:  VMTLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV
         + + DF + ++++E  KNEALVK+L+ADGQVA+I+  TVWVTA+GKEIAS +PPE EA F+H                 E+KVQKVGV
Subjt:  VMTLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV

TrEMBL top hitse value%identityAlignment
A0A5A7T6R6 Zf-CCHC domain-containing protein/MP domain-containing protein4.7e-4659.36Show/hide
Query:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM
        MSSR S SS  +S ++   + +RSES+RASVDF+H IPDV Y  E+GSLSPTQSDMERR+E  +NQINVIS  ++R  E YS YID WI AP ETRKP +
Subjt:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM

Query:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV
        T+ DF   + + E  KNEAL KKLQADGQVA+I+  TVWVTA GKE+AS +PPEEEA FSH                 EDKVQKVGV
Subjt:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV

A0A5A7UR29 Enzymatic polyprotein1.6e-4658.82Show/hide
Query:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM
        MSSR S SS  +S ++   + +RSES+RASVDF+H IPD+ Y  E+GSLSPTQSDMERR+E  +NQINVIS  ++R+ E YS YID WI AP ETRKP +
Subjt:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM

Query:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV
        T+ DF   + + E  KNEAL KKLQADGQVA+I+  TVWVTA GKE+AS +PPEEEA FSH                 EDKVQKVGV
Subjt:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV

A0A5A7UX67 Enzymatic polyprotein1.2e-4659.36Show/hide
Query:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM
        MSSR S SS  +S ++   + +RSES+RASVDF+H IPDV Y  E+GSLSPTQSDMERR+E  +NQINVIS  ++R+ E YS YID WI AP ETRKP +
Subjt:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM

Query:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV
        T+ DF   + + E  KNEAL KKLQADGQVA+I+  TVWVTA GKE+AS +PPEEEA FSH                 EDKVQKVGV
Subjt:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV

A0A5A7VKK8 Enzymatic polyprotein1.4e-4557.67Show/hide
Query:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPE--KRYEELYSKYIDMWIAAPKETRKP
        MSSR S SS ARS S+   + +RSES+RAS+DF+  IP V Y  E+ SLSPTQSDMERRTE  +NQINVIS  E   R++E YSKY+DMW+AAP ETRKP
Subjt:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPE--KRYEELYSKYIDMWIAAPKETRKP

Query:  VMTLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV
         + + DF + ++++E  KNEALVK+L+ADGQVA+I+  TVWVTA+GKEIAS +PPE EA F+H                 E+KVQKVGV
Subjt:  VMTLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV

A0A5D3BEY3 Enzymatic polyprotein1.2e-4659.36Show/hide
Query:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM
        MSSR S SS  +S ++   + +RSES+RASVDF+H IPDV Y  E+GSLSPTQSDMERR+E  +NQINVIS  ++R+ E YS YID WI AP ETRKP +
Subjt:  MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQY--EEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVM

Query:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV
        T+ DF   + + E  KNEAL KKLQADGQVA+I+  TVWVTA GKE+AS +PPEEEA FSH                 EDKVQKVGV
Subjt:  TLGDFTSKIQERELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSH-----------------EDKVQKVGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGCCGCCGAAGCGTATCTTCAGATGCAAGATCGGTGAGCACTATTAATAGATCTTTTAAAAGATCTGAATCCATGCGAGCGTCAGTAGACTTTACTCACCCGAT
CCCTGACGTTCAATATGAAGAAGGATCACTCTCTCCAACTCAATCCGACATGGAAAGGAGAACTGAATCCGCCTTCAATCAAATAAACGTGATCTCAAAACCTGAGAAAC
GTTATGAAGAACTATACAGCAAGTACATCGATATGTGGATTGCTGCACCAAAAGAAACAAGAAAACCTGTCATGACCCTTGGCGATTTCACTTCAAAGATACAAGAACGA
GAGCTAGTTAAGAACGAAGCTCTAGTCAAAAAACTCCAGGCTGATGGACAGGTAGCAGTTATCAGGAATGGCACTGTTTGGGTCACTGCAAGAGGCAAAGAAATAGCTTC
CACCTTCCCTCCAGAAGAAGAAGCTTCCTTCTCTCATGAAGACAAAGTCCAGAAAGTTGGTGTTAGTATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGCCGCCGAAGCGTATCTTCAGATGCAAGATCGGTGAGCACTATTAATAGATCTTTTAAAAGATCTGAATCCATGCGAGCGTCAGTAGACTTTACTCACCCGAT
CCCTGACGTTCAATATGAAGAAGGATCACTCTCTCCAACTCAATCCGACATGGAAAGGAGAACTGAATCCGCCTTCAATCAAATAAACGTGATCTCAAAACCTGAGAAAC
GTTATGAAGAACTATACAGCAAGTACATCGATATGTGGATTGCTGCACCAAAAGAAACAAGAAAACCTGTCATGACCCTTGGCGATTTCACTTCAAAGATACAAGAACGA
GAGCTAGTTAAGAACGAAGCTCTAGTCAAAAAACTCCAGGCTGATGGACAGGTAGCAGTTATCAGGAATGGCACTGTTTGGGTCACTGCAAGAGGCAAAGAAATAGCTTC
CACCTTCCCTCCAGAAGAAGAAGCTTCCTTCTCTCATGAAGACAAAGTCCAGAAAGTTGGTGTTAGTATCTAA
Protein sequenceShow/hide protein sequence
MSSRRSVSSDARSVSTINRSFKRSESMRASVDFTHPIPDVQYEEGSLSPTQSDMERRTESAFNQINVISKPEKRYEELYSKYIDMWIAAPKETRKPVMTLGDFTSKIQER
ELVKNEALVKKLQADGQVAVIRNGTVWVTARGKEIASTFPPEEEASFSHEDKVQKVGVSI