; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027162 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027162
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionG-patch domain-containing protein
Genome locationscaffold197:1116471..1117662
RNA-Seq ExpressionMS027162
SyntenyMS027162
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF25156.1 conserved hypothetical protein, partial [Ricinus communis]7.1e-1382.98Show/hide
Query:  LPDFSDVVFVKEMFRSMRHLPGSGLGRCHQEIMEPIHLQAIEPPFGL
        LP+FSD VFV EMFRSMR+LPGSGLGR HQ I+EPIH+QAIEPPFGL
Subjt:  LPDFSDVVFVKEMFRSMRHLPGSGLGRCHQEIMEPIHLQAIEPPFGL
EEF27092.1 conserved hypothetical protein [Ricinus communis]6.9e-0885.71Show/hide
Query:  MFRSMRHLPGSGLGRCHQEIMEPIHLQAIEPPFGL
        MFRSMR+LPGSGLGR HQ I+EPIH+QAIEPPFGL
Subjt:  MFRSMRHLPGSGLGRCHQEIMEPIHLQAIEPPFGL
TrEMBL top hitse value%identityAlignment
B9TAM0 G-patch domain-containing protein3.3e-0885.71Show/hide
Query:  MFRSMRHLPGSGLGRCHQEIMEPIHLQAIEPPFGL
        MFRSMR+LPGSGLGR HQ I+EPIH+QAIEPPFGL
Subjt:  MFRSMRHLPGSGLGRCHQEIMEPIHLQAIEPPFGL
B9TG58 G-patch domain-containing protein (Fragment)3.4e-1382.98Show/hide
Query:  LPDFSDVVFVKEMFRSMRHLPGSGLGRCHQEIMEPIHLQAIEPPFGL
        LP+FSD VFV EMFRSMR+LPGSGLGR HQ I+EPIH+QAIEPPFGL
Subjt:  LPDFSDVVFVKEMFRSMRHLPGSGLGRCHQEIMEPIHLQAIEPPFGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACGGAGACTCAGACCCGTGTGGGTGGATCCCACATGAGAACTGCATTTGTGACCATCGATCTTCCAACGGGCGATGGTTATCCGTCGGATCAAACAGATGACAA
GACAGATGAAGCCTTGCCCGATTTTAGTGATGTCGTCTTTGTTAAGGAAATGTTCCGATCAATGCGCCATCTCCCTGGATCAGGACTCGGCCGGTGTCACCAAGAAATCA
TGGAGCCAATTCATCTCCAGGCGATTGAGCCACCTTTTGGGTTGCCCTCGATTGTTCCAGAGAAAAGGATCATGGCACACGGATATATAAAAAGAAAAGAAAAGAATAGA
GGCATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCACGGAGACTCAGACCCGTGTGGGTGGATCCCACATGAGAACTGCATTTGTGACCATCGATCTTCCAACGGGCGATGGTTATCCGTCGGATCAAACAGATGACAA
GACAGATGAAGCCTTGCCCGATTTTAGTGATGTCGTCTTTGTTAAGGAAATGTTCCGATCAATGCGCCATCTCCCTGGATCAGGACTCGGCCGGTGTCACCAAGAAATCA
TGGAGCCAATTCATCTCCAGGCGATTGAGCCACCTTTTGGGTTGCCCTCGATTGTTCCAGAGAAAAGGATCATGGCACACGGATATATAAAAAGAAAAGAAAAGAATAGA
GGCATTTAG
Protein sequenceShow/hide protein sequence
MSTETQTRVGGSHMRTAFVTIDLPTGDGYPSDQTDDKTDEALPDFSDVVFVKEMFRSMRHLPGSGLGRCHQEIMEPIHLQAIEPPFGLPSIVPEKRIMAHGYIKRKEKNR
GI