CuGenDBv2

Gene ID	MS027165
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transmembrane protein 18
Genome location	scaffold197:1167404..1169242
RNA-Seq Expression	MS027165
Synteny	MS027165
Gene Ontology terms	GO:0009846 - pollen germination (biological process) GO:0009860 - pollen tube growth (biological process) GO:0052543 - callose deposition in cell wall (biological process) GO:0005640 - nuclear outer membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7033663.1 Transmembrane protein 18, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.0e-16

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Query:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY
        MEELRSAMEEHMDQMADL+ KLSSELRSGLRPAVDNFIGFFHAIDWKE +
Subjt:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY

POO00221.1 Transmembrane protein [Trema orientale]

2.9e-16

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Query:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY
        MEELRSAMEEHMDQMADL+HKLS+ELRSGLRPA +NFIGFFHAIDWKE +
Subjt:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY

XP_022156188.1 transmembrane protein 18 [Momordica charantia]

5.8e-17

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Query:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY
        MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAI WKE +
Subjt:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY

XP_022949841.1 transmembrane protein 18 [Cucurbita moschata]

1.0e-16

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Query:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY
        MEELRSAMEEHMDQMADL+ KLSSELRSGLRPAVDNFIGFFHAIDWKE +
Subjt:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY

XP_023543279.1 transmembrane protein 18 [Cucurbita pepo subsp. pepo]

1.0e-16

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Query:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY
        MEELRSAMEEHMDQMADL+ KLSSELRSGLRPAVDNFIGFFHAIDWKE +
Subjt:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY

TrEMBL top hits

e value

%identity

Alignment

A0A2P5E5D7 Transmembrane protein 18

1.4e-16

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Query:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY
        MEELRSAMEEHMDQMADL+HKLS+ELRSGLRPA +NFIGFFHAIDWKE +
Subjt:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY

A0A2P5FR32 Transmembrane protein 18

1.4e-16

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Query:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY
        MEELRSAMEEHMDQMADL+HKLS+ELRSGLRPA +NFIGFFHAIDWKE +
Subjt:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY

A0A6J1DPY2 Transmembrane protein 18

2.8e-17

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Query:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY
        MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAI WKE +
Subjt:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY

A0A6J1GD63 Transmembrane protein 18

4.8e-17

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Query:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY
        MEELRSAMEEHMDQMADL+ KLSSELRSGLRPAVDNFIGFFHAIDWKE +
Subjt:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY

A0A6J1ISM9 Transmembrane protein 18

4.8e-17

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Query:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY
        MEELRSAMEEHMDQMADL+ KLSSELRSGLRPAVDNFIGFFHAIDWKE +
Subjt:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G34350.1 unknown protein

7.6e-15

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Query:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY
        MEE+RSAME+ +D +ADL+ KLS ELR+G +PA DNF+GFFHAIDWKE +
Subjt:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY

AT1G34350.2 unknown protein

7.6e-15

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Query:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY
        MEE+RSAME+ +D +ADL+ KLS ELR+G +PA DNF+GFFHAIDWKE +
Subjt:  MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIDWKEAY

Sequences

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CDS sequence

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ATGATAAACAATTTTCGTTGCCAATTTTGTGGTGTAGAATTGTTGAGACAATCTTGTGCCAAAAGAATTCCTTATTTCATTGTCATAGATATATTTGCTGACGAAATATA
TGTTTTTGAACGAGTTAGATCCGAGCAAGAAATTGGGTCGAAGAAGAACCCCGAAGATTATCCGAAGATCGAGAAGACGAAATCCGAGACTGAGACTGTAAACTCCATTA
TCAAGAAATTGGGTTTTTTGGAGCTTCAATTTGATTTTTACTTGATGGAGGAGTTGCGATCCGCAATGGAGGAACATATGGACCAAATGGCGGATCTGATTCACAAATTA
TCCTCCGAACTCCGATCCGGTCTTCGTCCCGCCGTCGATAATTTCATCGGTTTCTTCCACGCCATTGACTGGAAGGAAGCGTACCAATTTTCAGATGTTCTTGTTCCTTC
TTGCACGTATGATTATTACTTCCATTTGCTCTGTATCTGTGCTTTTGCAATGTTGAAATGTTTTGTAGCTGTTCTGTTCATATTGCATCTTCTGTACTGGTGA

mRNA sequence

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Protein sequence

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MINNFRCQFCGVELLRQSCAKRIPYFIVIDIFADEIYVFERVRSEQEIGSKKNPEDYPKIEKTKSETETVNSIIKKLGFLELQFDFYLMEELRSAMEEHMDQMADLIHKL
SSELRSGLRPAVDNFIGFFHAIDWKEAYQFSDVLVPSCTYDYYFHLLCICAFAMLKCFVAVLFILHLLYW

MS027165 (gene) of Bitter gourd (TR) v1 genome