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MS027223 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027223
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionColicin import membrane protein
Genome locationscaffold322:364632..365714
RNA-Seq ExpressionMS027223
SyntenyMS027223
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_144889736.1 hypothetical protein [Flavobacterium tiangeerense]3.0e-0434.55Show/hide
Query:  EAEATKHEEEEMSQKVKASAAKLKADAAKDRAAAAEAEATKDEEEEMSQKMKANAAKQKATAAQAEATKNEEEDMSQKLRAITAKLKAEAAKLHAMKQEE
        E +ATK   E++++  K  AAK KA+A K++  AA+ +ATK + +  + K K  AAK+KAT A+A+A   +E+  + K +A  AK KA+A+K      +E
Subjt:  EAEATKHEEEEMSQKVKASAAKLKADAAKDRAAAAEAEATKDEEEEMSQKMKANAAKQKATAAQAEATKNEEEDMSQKLRAITAKLKAEAAKLHAMKQEE

Query:  EAEKAKAKATMAEATVTAAEARAARAQMRATTVLEEVKQKEEQVLSALASATASTDTEAQSLPSR
        +A KAK KA   +    A + +A +A+ +A    E+ +  +E+   A A A A+ +  A + P++
Subjt:  EAEKAKAKATMAEATVTAAEARAARAQMRATTVLEEVKQKEEQVLSALASATASTDTEAQSLPSR
WP_221917925.1 hypothetical protein [Flavobacterium sp. CHNK8]6.0e-0535.2Show/hide
Query:  TAIEAKARENEEKEFREISRVAAAKDRAGPAEAEATKHEEEEMSQKVKASAAKLKADAAKDRAAAAEAEATKDEEEEMSQKMKANAAKQKATAAQAEATK
        TA E KA +   ++  +  +  AAK     A+AEATK + E  + K KA+ AK KADA K++  AA+ +ATK + +  + K K  AAK+KAT A+A+A  
Subjt:  TAIEAKARENEEKEFREISRVAAAKDRAGPAEAEATKHEEEEMSQKVKASAAKLKADAAKDRAAAAEAEATKDEEEEMSQKMKANAAKQKATAAQAEATK

Query:  NEEEDMSQKLRAITAKLKAEAAKLHAMKQEEEAEKAKAKATMAEATVTAAEARAARAQMRATTVLEEVKQKEEQVLSALASATASTDTEAQSLPSR
        ++E+  + K +A  AK KA+A K      +E+A KAK KA   +    A + +A +A+ +A    E+ +  +E+   A A A A+ +  A + P++
Subjt:  NEEEDMSQKLRAITAKLKAEAAKLHAMKQEEEAEKAKAKATMAEATVTAAEARAARAQMRATTVLEEVKQKEEQVLSALASATASTDTEAQSLPSR
TrEMBL top hitse value%identityAlignment
A0A562L4G6 Colicin import membrane protein1.4e-0434.55Show/hide
Query:  EAEATKHEEEEMSQKVKASAAKLKADAAKDRAAAAEAEATKDEEEEMSQKMKANAAKQKATAAQAEATKNEEEDMSQKLRAITAKLKAEAAKLHAMKQEE
        E +ATK   E++++  K  AAK KA+A K++  AA+ +ATK + +  + K K  AAK+KAT A+A+A   +E+  + K +A  AK KA+A+K      +E
Subjt:  EAEATKHEEEEMSQKVKASAAKLKADAAKDRAAAAEAEATKDEEEEMSQKMKANAAKQKATAAQAEATKNEEEDMSQKLRAITAKLKAEAAKLHAMKQEE

Query:  EAEKAKAKATMAEATVTAAEARAARAQMRATTVLEEVKQKEEQVLSALASATASTDTEAQSLPSR
        +A KAK KA   +    A + +A +A+ +A    E+ +  +E+   A A A A+ +  A + P++
Subjt:  EAEKAKAKATMAEATVTAAEARAARAQMRATTVLEEVKQKEEQVLSALASATASTDTEAQSLPSR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTGAGGAAGCAGCGACGGCCATAGAGGCGAAAGCGAGAGAGAATGAAGAGAAAGAGTTTAGAGAGATATCGAGGGTCGCGGCGGCGAAGGATAGAGCGGGGCC
CGCGGAGGCAGAAGCCACGAAGCATGAAGAGGAGGAGATGAGCCAGAAAGTGAAGGCCAGTGCAGCAAAACTGAAAGCGGATGCGGCAAAGGATAGAGCGGCGGCCGCGG
AGGCAGAAGCCACGAAGGATGAAGAGGAAGAGATGAGCCAGAAAATGAAGGCCAATGCAGCAAAACAGAAAGCGACGGCCGCCCAGGCAGAAGCCACGAAGAATGAAGAG
GAGGATATGAGCCAGAAACTGAGGGCCATTACAGCAAAACTTAAAGCGGAGGCGGCAAAGCTTCATGCTATGAAGCAGGAAGAAGAGGCGGAAAAAGCAAAAGCAAAGGC
CACAATGGCAGAAGCCACAGTGACGGCCGCGGAAGCAAGGGCTGCTAGAGCACAGATGAGAGCAACGACGGTGCTGGAAGAGGTGAAACAGAAAGAAGAACAAGTATTGA
GTGCATTAGCTAGCGCCACGGCTTCTACTGATACAGAAGCCCAATCACTCCCTTCGAGAATAGGTATCAATCGGTACATTCCTCCCAAATTTCTCTATATACTACTGAAA
TATTCCACCTACATTTGTGAAGGCTTGTGTATAGCTGGACTGATGTTTACTCGAGTACCTACACTAGTTATGGCGCCTCAATCTCATCCTGATAACACACCCCCTAAGTT
TGGCTGGGTAGTTGCTATTATGGCTGTTTTATCTAGTGTATTGTATGCCCATTTTTTCACTACCAATCCAGAACCAGAACCAGAACCCGAAGCCAGGGAGACTAGAAATG
AGGTTGTCAAATCAGTTTTCTGGAGAAGGCTTCTTAGAACCTTCATTCAAATCTTCATTATTCTTGTATGTTTCTTTTTGTCTGTAAATTTGGATAGGAACTTATTATCG
CTGTCCTGCTGCACCACTATTCTCCGATCTAAATATACTAGGACAAGGTTTGACTATGGAGTCTTCGACTCCATAGTCAAGTCTTGCTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTGAGGAAGCAGCGACGGCCATAGAGGCGAAAGCGAGAGAGAATGAAGAGAAAGAGTTTAGAGAGATATCGAGGGTCGCGGCGGCGAAGGATAGAGCGGGGCC
CGCGGAGGCAGAAGCCACGAAGCATGAAGAGGAGGAGATGAGCCAGAAAGTGAAGGCCAGTGCAGCAAAACTGAAAGCGGATGCGGCAAAGGATAGAGCGGCGGCCGCGG
AGGCAGAAGCCACGAAGGATGAAGAGGAAGAGATGAGCCAGAAAATGAAGGCCAATGCAGCAAAACAGAAAGCGACGGCCGCCCAGGCAGAAGCCACGAAGAATGAAGAG
GAGGATATGAGCCAGAAACTGAGGGCCATTACAGCAAAACTTAAAGCGGAGGCGGCAAAGCTTCATGCTATGAAGCAGGAAGAAGAGGCGGAAAAAGCAAAAGCAAAGGC
CACAATGGCAGAAGCCACAGTGACGGCCGCGGAAGCAAGGGCTGCTAGAGCACAGATGAGAGCAACGACGGTGCTGGAAGAGGTGAAACAGAAAGAAGAACAAGTATTGA
GTGCATTAGCTAGCGCCACGGCTTCTACTGATACAGAAGCCCAATCACTCCCTTCGAGAATAGGTATCAATCGGTACATTCCTCCCAAATTTCTCTATATACTACTGAAA
TATTCCACCTACATTTGTGAAGGCTTGTGTATAGCTGGACTGATGTTTACTCGAGTACCTACACTAGTTATGGCGCCTCAATCTCATCCTGATAACACACCCCCTAAGTT
TGGCTGGGTAGTTGCTATTATGGCTGTTTTATCTAGTGTATTGTATGCCCATTTTTTCACTACCAATCCAGAACCAGAACCAGAACCCGAAGCCAGGGAGACTAGAAATG
AGGTTGTCAAATCAGTTTTCTGGAGAAGGCTTCTTAGAACCTTCATTCAAATCTTCATTATTCTTGTATGTTTCTTTTTGTCTGTAAATTTGGATAGGAACTTATTATCG
CTGTCCTGCTGCACCACTATTCTCCGATCTAAATATACTAGGACAAGGTTTGACTATGGAGTCTTCGACTCCATAGTCAAGTCTTGCTGTTAG
Protein sequenceShow/hide protein sequence
MAAEEAATAIEAKARENEEKEFREISRVAAAKDRAGPAEAEATKHEEEEMSQKVKASAAKLKADAAKDRAAAAEAEATKDEEEEMSQKMKANAAKQKATAAQAEATKNEE
EDMSQKLRAITAKLKAEAAKLHAMKQEEEAEKAKAKATMAEATVTAAEARAARAQMRATTVLEEVKQKEEQVLSALASATASTDTEAQSLPSRIGINRYIPPKFLYILLK
YSTYICEGLCIAGLMFTRVPTLVMAPQSHPDNTPPKFGWVVAIMAVLSSVLYAHFFTTNPEPEPEPEARETRNEVVKSVFWRRLLRTFIQIFIILVCFFLSVNLDRNLLS
LSCCTTILRSKYTRTRFDYGVFDSIVKSCC