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MS027237 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027237
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type domain-containing protein
Genome locationscaffold33:612291..612695
RNA-Seq ExpressionMS027237
SyntenyMS027237
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER46638.1 hypothetical protein STAS_23691 [Striga asiatica]1.7e-1354.13Show/hide
Query:  AEQIGDRTGVAALEELLLVLENEPVRVQIGRENRRLAEEVGREDRAEPAHPVVDERLRVLRLVGGDQLKGLADEGEAE-SPRREAEAPESGRPAEEEEEE
        AE++ D  G A      L +E+EPVRV++G E+ RLAE+VG E+R+EP  PVVDE LR+   VGGD+L+ LADEG  E S R EA A   G  AEEEE+ 
Subjt:  AEQIGDRTGVAALEELLLVLENEPVRVQIGRENRRLAEEVGREDRAEPAHPVVDERLRVLRLVGGDQLKGLADEGEAE-SPRREAEAPESGRPAEEEEEE

Query:  NGGQEEEEE
          G+EEEEE
Subjt:  NGGQEEEEE

THU57920.1 hypothetical protein C4D60_Mb03t08650 [Musa balbisiana]1.2e-0645.68Show/hide
Query:  AEQIGDRTGVAALEELLLVLENEPVRVQIGRENRRLAEEVGREDRAEPAHPVVDERLRVLRLVGGDQLKGLADEGEAESPR
        A+Q GD   VAAL    L  ++ PV +++ RE+R L E+V RE    P HP+VDERLRVLR V  DQ + L    +  +PR
Subjt:  AEQIGDRTGVAALEELLLVLENEPVRVQIGRENRRLAEEVGREDRAEPAHPVVDERLRVLRLVGGDQLKGLADEGEAESPR

TrEMBL top hitse value%identityAlignment
A0A0E0RDJ9 RING-type domain-containing protein6.8e-0842.54Show/hide
Query:  AEQIGDRTGVAALEELLLVLENEPVRVQIGRENRRLAEEVGREDRAEPAHPVVDERLRVLRLVGGDQLKGLADEGEAESPRRE----AEAPESGRPAEEE
        AE+ GD   VA ++   L  E E V  ++G E+  LAE+VG E  A   H +VDERLRV RLV  D+ + LA++ +A +PRR      + P  G P EEE
Subjt:  AEQIGDRTGVAALEELLLVLENEPVRVQIGRENRRLAEEVGREDRAEPAHPVVDERLRVLRLVGGDQLKGLADEGEAESPRRE----AEAPESGRPAEEE

Query:  EEE-------NGGQEEEEE--DGHGGLGLGLELG
          E        GG+ EEE+   GHGG   GLE G
Subjt:  EEE-------NGGQEEEEE--DGHGGLGLGLELG

A0A2P2MCA6 Uncharacterized protein1.4e-0841.67Show/hide
Query:  MFAEQIGDRTGVAALEELLLVLENEPVRVQIGRENRRLAEEVGREDRAEPAHPVVDERLRVLRLVGGDQLKGLADEGEAESPRR
        + ++Q+G R  V   ++L  +L+NEPVR+ +G E+ R  + +GRE+  EP +  VDERL +  LV   QL+  AD+ +AE+PRR
Subjt:  MFAEQIGDRTGVAALEELLLVLENEPVRVQIGRENRRLAEEVGREDRAEPAHPVVDERLRVLRLVGGDQLKGLADEGEAESPRR

A0A4S8J8J8 Uncharacterized protein5.7e-0745.68Show/hide
Query:  AEQIGDRTGVAALEELLLVLENEPVRVQIGRENRRLAEEVGREDRAEPAHPVVDERLRVLRLVGGDQLKGLADEGEAESPR
        A+Q GD   VAAL    L  ++ PV +++ RE+R L E+V RE    P HP+VDERLRVLR V  DQ + L    +  +PR
Subjt:  AEQIGDRTGVAALEELLLVLENEPVRVQIGRENRRLAEEVGREDRAEPAHPVVDERLRVLRLVGGDQLKGLADEGEAESPR

A0A5A7QNX8 Uncharacterized protein8.3e-1454.13Show/hide
Query:  AEQIGDRTGVAALEELLLVLENEPVRVQIGRENRRLAEEVGREDRAEPAHPVVDERLRVLRLVGGDQLKGLADEGEAE-SPRREAEAPESGRPAEEEEEE
        AE++ D  G A      L +E+EPVRV++G E+ RLAE+VG E+R+EP  PVVDE LR+   VGGD+L+ LADEG  E S R EA A   G  AEEEE+ 
Subjt:  AEQIGDRTGVAALEELLLVLENEPVRVQIGRENRRLAEEVGREDRAEPAHPVVDERLRVLRLVGGDQLKGLADEGEAE-SPRREAEAPESGRPAEEEEEE

Query:  NGGQEEEEE
          G+EEEEE
Subjt:  NGGQEEEEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGCCGAGCAGATTGGAGATCGAACCGGGGTAGCTGCACTCGAAGAGCTTCTCCTCGTTCTGGAGAATGAACCGGTTCGTGTCCAGATCGGCCGAGAAAACCGTCG
GCTCGCCGAAGAGGTGGGTCGTGAAGACCGGGCCGAACCGGCGCACCCGGTCGTCGATGAACGGCTCCGGGTTCTCCGACTTGTAGGCGGAGATCAGCTGAAGGGTCTCG
CCGACGAGGGGGAGGCCGAGAGTCCCCGGCGGGAGGCGGAGGCGCCGGAATCTGGCCGGCCGGCGGAGGAGGAGGAGGAGGAAAACGGAGGCCAGGAGGAAGAGGAAGAA
GATGGCCATGGGGGATTGGGATTGGGATTGGAATTGGGGAAATGGGTTTCAGAGAAAATTAGATTATGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGCCGAGCAGATTGGAGATCGAACCGGGGTAGCTGCACTCGAAGAGCTTCTCCTCGTTCTGGAGAATGAACCGGTTCGTGTCCAGATCGGCCGAGAAAACCGTCG
GCTCGCCGAAGAGGTGGGTCGTGAAGACCGGGCCGAACCGGCGCACCCGGTCGTCGATGAACGGCTCCGGGTTCTCCGACTTGTAGGCGGAGATCAGCTGAAGGGTCTCG
CCGACGAGGGGGAGGCCGAGAGTCCCCGGCGGGAGGCGGAGGCGCCGGAATCTGGCCGGCCGGCGGAGGAGGAGGAGGAGGAAAACGGAGGCCAGGAGGAAGAGGAAGAA
GATGGCCATGGGGGATTGGGATTGGGATTGGAATTGGGGAAATGGGTTTCAGAGAAAATTAGATTATGGTTTTGA
Protein sequenceShow/hide protein sequence
MFAEQIGDRTGVAALEELLLVLENEPVRVQIGRENRRLAEEVGREDRAEPAHPVVDERLRVLRLVGGDQLKGLADEGEAESPRREAEAPESGRPAEEEEEENGGQEEEEE
DGHGGLGLGLELGKWVSEKIRLWF