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MS027259 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027259
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1474:93466..93696
RNA-Seq ExpressionMS027259
SyntenyMS027259
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AVQ04979.1 hypothetical protein [Phalaenopsis pulcherrima]2.5e-2284Show/hide
Query:  MLRIARISIRRCHSFDEKEEGISKIRVAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK
        MLRIARIS RRCHS DEKE+GISKIRVAEAE  TFEVTERKATTGV E ESKRGFL S S SK CMRLS RTAPK
Subjt:  MLRIARISIRRCHSFDEKEEGISKIRVAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK

CAA9893446.1 unnamed protein product [Spirodela intermedia]1.5e-1166.67Show/hide
Query:  MLRIARISIRRCHSFDEKEEGISKIRVAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK
        MLRIARIS RR                  +EA TFEVTERKATTGV E ESKRGFLTSFS SK CMRLSSRTAPK
Subjt:  MLRIARISIRRCHSFDEKEEGISKIRVAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK

GGM26993.1 hypothetical protein GCM10010129_84140 [Streptomyces fumigatiscleroticus]1.5e-1187.76Show/hide
Query:  VAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK
        +AEAEA TFEVTERKATTGV E ESKRGFLTSFS SK CMRLSSRTAPK
Subjt:  VAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK

GGQ91326.1 hypothetical protein GCM10010145_69790 [Streptomyces ruber]5.9e-1185.71Show/hide
Query:  VAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK
        +AEAEA TFEVTERKATTGV E ESKRGFLTSFS SK CMRLS RTAPK
Subjt:  VAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK

YP_358628.1 hypothetical protein PhapfoPp082 [Phalaenopsis aphrodite subsp. formosana]2.5e-2284Show/hide
Query:  MLRIARISIRRCHSFDEKEEGISKIRVAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK
        MLRIARIS RRCHS +EKE+GISKIRVAEAE  TFEVTERKATTGV E ESKRGFLTS S SK CMRLS RTAPK
Subjt:  MLRIARISIRRCHSFDEKEEGISKIRVAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK

TrEMBL top hitse value%identityAlignment
A0A2R3TW35 Uncharacterized protein1.2e-2284Show/hide
Query:  MLRIARISIRRCHSFDEKEEGISKIRVAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK
        MLRIARIS RRCHS DEKE+GISKIRVAEAE  TFEVTERKATTGV E ESKRGFL S S SK CMRLS RTAPK
Subjt:  MLRIARISIRRCHSFDEKEEGISKIRVAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK

A0A3Q7FYI0 Uncharacterized protein5.0e-0878.72Show/hide
Query:  EAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK
        EAEA T EVTERK TTGV E E KRGFL SFS SK CMRLSS TAPK
Subjt:  EAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK

A0A7I8LN58 Hypothetical protein2.3e-0859.46Show/hide
Query:  MLRIARISIRRCHSFDEKEEGISKIRVAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAP
        MLR+ARIS RR                  +EA TFEVTERKATT V E ESK+GFLTS S SK CMRLSSR AP
Subjt:  MLRIARISIRRCHSFDEKEEGISKIRVAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAP

Q3BAJ0 Uncharacterized protein1.2e-2284Show/hide
Query:  MLRIARISIRRCHSFDEKEEGISKIRVAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK
        MLRIARIS RRCHS +EKE+GISKIRVAEAE  TFEVTERKATTGV E ESKRGFLTS S SK CMRLS RTAPK
Subjt:  MLRIARISIRRCHSFDEKEEGISKIRVAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAGAATAGCTAGGATTTCCATCAGAAGATGCCATTCGTTTGATGAGAAAGAAGAAGGAATATCGAAAATTCGAGTGGCTGAAGCTGAAGCAACTACTTTCGAAGT
AACAGAAAGAAAAGCAACGACTGGAGTGGAAGAGTTAGAGTCGAAAAGAGGATTCCTCACTTCTTTCTCTCCTTCAAAATCATGCATGAGACTTTCATCTCGCACGGCTC
CTAAGCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTAAGAATAGCTAGGATTTCCATCAGAAGATGCCATTCGTTTGATGAGAAAGAAGAAGGAATATCGAAAATTCGAGTGGCTGAAGCTGAAGCAACTACTTTCGAAGT
AACAGAAAGAAAAGCAACGACTGGAGTGGAAGAGTTAGAGTCGAAAAGAGGATTCCTCACTTCTTTCTCTCCTTCAAAATCATGCATGAGACTTTCATCTCGCACGGCTC
CTAAGCTCTAA
Protein sequenceShow/hide protein sequence
MLRIARISIRRCHSFDEKEEGISKIRVAEAEATTFEVTERKATTGVEELESKRGFLTSFSPSKSCMRLSSRTAPKL