; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027260 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027260
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase
Genome locationscaffold1474:134100..135550
RNA-Seq ExpressionMS027260
SyntenyMS027260
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057642.1 reverse transcriptase [Cucumis melo var. makuwa]5.2e-3133.41Show/hide
Query:  MVMEVLSRMLNKPPPGFWFHQKCDM----LAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHRRYHHDVSLCLSGLSLVFGVGR
        MVMEVLSRMLNK P  F FH +C+     L+GL AN +KSS F AG+ +    +LAA   F  G+LPV YLG+PLL+ R   +D   C+  +  +    R
Subjt:  MVMEVLSRMLNKPPPGFWFHQKCDM----LAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHRRYHHDVSLCLSGLSLVFGVGR

Query:  LRCFLLLAGYSLFSRFCRVFRFIGP---VCSFFKLGLLMMLSKFCVVSCGRVVRASGRGLR----WHGLRLALYRWLGCRPIFFEGSV----IGLFVLRL
        +R           SR  RV  F G    VCS     L +  +   V+         G G+R    W         WL    +   GS+    +  +VL+ 
Subjt:  LRCFLLLAGYSLFSRFCRVFRFIGP---VCSFFKLGLLMMLSKFCVVSCGRVVRASGRGLR----WHGLRLALYRWLGCRPIFFEGSV----IGLFVLRL

Query:  TSL-----GVGGIFFLS-------------RMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLG
         SL      VG  + L              RM  G     R+ +   +  G  L   G R +     R    L    G   +W     R   S+  ++  
Subjt:  TSL-----GVGGIFFLS-------------RMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLG

Query:  VECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCV-GFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWST
        +   G    G      +L+   GGNI K+SF  WLA+ DRL TRDR   WDSS+ +SC+ C  G ES D++FF CPF  +VWSR++    SSH + +W  
Subjt:  VECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCV-GFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWST

Query:  KLAWICHISAGKSARR
        +L+WICH    K  RR
Subjt:  KLAWICHISAGKSARR

TYK19523.1 reverse transcriptase [Cucumis melo var. makuwa]5.2e-3133.41Show/hide
Query:  MVMEVLSRMLNKPPPGFWFHQKCDM----LAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHRRYHHDVSLCLSGLSLVFGVGR
        MVMEVLSRMLNK P  F FH +C+     L+GL AN +KSS F AG+ +    +LAA   F  G+LPV YLG+PLL+ R   +D   C+  +  +    R
Subjt:  MVMEVLSRMLNKPPPGFWFHQKCDM----LAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHRRYHHDVSLCLSGLSLVFGVGR

Query:  LRCFLLLAGYSLFSRFCRVFRFIGP---VCSFFKLGLLMMLSKFCVVSCGRVVRASGRGLR----WHGLRLALYRWLGCRPIFFEGSV----IGLFVLRL
        +R           SR  RV  F G    VCS     L +  +   V+         G G+R    W         WL    +   GS+    +  +VL+ 
Subjt:  LRCFLLLAGYSLFSRFCRVFRFIGP---VCSFFKLGLLMMLSKFCVVSCGRVVRASGRGLR----WHGLRLALYRWLGCRPIFFEGSV----IGLFVLRL

Query:  TSL-----GVGGIFFLS-------------RMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLG
         SL      VG  + L              RM  G     R+ +   +  G  L   G R +     R    L    G   +W     R   S+  ++  
Subjt:  TSL-----GVGGIFFLS-------------RMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLG

Query:  VECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCV-GFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWST
        +   G    G      +L+   GGNI K+SF  WLA+ DRL TRDR   WDSS+ +SC+ C  G ES D++FF CPF  +VWSR++    SSH + +W  
Subjt:  VECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCV-GFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWST

Query:  KLAWICHISAGKSARR
        +L+WICH    K  RR
Subjt:  KLAWICHISAGKSARR

XP_008452126.1 PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo]4.7e-3233.89Show/hide
Query:  MVMEVLSRMLNKPPPGFWFHQKCDM----LAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHRRYHHDVSLCLSGLSLVFGVGR
        MVMEVLSRMLNK P  F FH +C+     L+GL AN +KSS F AG+ +    +LAA   F  G+LPV YLG+PLL+ R   +D   C+  +  +    R
Subjt:  MVMEVLSRMLNKPPPGFWFHQKCDM----LAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHRRYHHDVSLCLSGLSLVFGVGR

Query:  LRCFLLLAGYSLFSRFCRVFRFIGP---VCSFFKLGLLMMLSKFCVVSCGRVVRASGRGLR----WHGLRLALYRWLGCRPIFFEGSV----IGLFVLRL
        +R           SR  RV  F G    VCS   L  L +      V    V    G G+R    W         WL    +   GS+    +  +VL+ 
Subjt:  LRCFLLLAGYSLFSRFCRVFRFIGP---VCSFFKLGLLMMLSKFCVVSCGRVVRASGRGLR----WHGLRLALYRWLGCRPIFFEGSV----IGLFVLRL

Query:  TSL-----GVGGIFFLS-------------RMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLG
         SL      VG  + L              RM  G     R+ +   +  G  L   G R +     R    L    G   +W     R   S+  ++  
Subjt:  TSL-----GVGGIFFLS-------------RMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLG

Query:  VECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCV-GFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWST
        +   G    G      +L+   GGNI K+SF  WLA+ DRL TRDR   WDSS+ +SC+ C  G ES D++FF CPF  +VWSR++    SSH + +W  
Subjt:  VECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCV-GFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWST

Query:  KLAWICHISAGKSARR
        +L+WICH    K  RR
Subjt:  KLAWICHISAGKSARR

XP_022149381.1 uncharacterized protein LOC111017811 [Momordica charantia]4.0e-3940Show/hide
Query:  MEVLSRMLNKPPPGFWFHQKCD-----------------------------------MLAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYL
        M VLSRMLN+  P F FH+KCD                                    LAGLVANT+KSSFFG G+PDV+VEQLAAF DFSV S PV YL
Subjt:  MEVLSRMLNKPPPGFWFHQKCD-----------------------------------MLAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYL

Query:  GVPLLSHRRYHHDVSLCLSGLSLVFGVGRLRCFLLLAGYSLFSRFCRVFRFIGPVCSFFKLGLLM-MLSKFCVVSCGRVVRASGRGLRWHGLRLALYRWL
        GVPL S R  HHD    L  +     V R           ++S   R+F F        +L L+  +L  F      +VV  +  G    G         
Subjt:  GVPLLSHRRYHHDVSLCLSGLSLVFGVGRLRCFLLLAGYSLFSRFCRVFRFIGPVCSFFKLGLLM-MLSKFCVVSCGRVVRASGRGLRWHGLRLALYRWL

Query:  GCRPIFFEGSVIGLFV--LRLTSLGVGG-IFFLSRMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVG
             + E +++ L+V  L +  L VGG IFFLS MLF LWF LRLEMVSVVLFGMTL F            +S +       S DW      +     G
Subjt:  GCRPIFFEGSVIGLFV--LRLTSLGVGG-IFFLSRMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVG

Query:  SFLGVECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCVGFES
         F        +                GNI K+SFI WLAV DRLAT DRL  WDSSI VSCVFCV FES
Subjt:  SFLGVECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCVGFES

XP_022157473.1 uncharacterized protein LOC111024165 [Momordica charantia]3.3e-3333.5Show/hide
Query:  MEVLSRMLNKPPPGFWFHQKCDML---------------------------AGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHR
        MEVLSR+LNK P GF FH KC+ +                             +     +   FG GLP V+ ++LAAF  FSV SL V YLGV LLS R
Subjt:  MEVLSRMLNKPPPGFWFHQKCDML---------------------------AGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHR

Query:  RYHHDVSLCLSGLSLVFGVGRLRCFLLLAGYSLFSRFCRVFRFIGPVCSFFK-LGLLMMLSKFCVVSCGRVVRASGRGLRWHGLRLALYRWLGCRPIFFE
          HHD    L  +                        CRV  +   + SF   L L+ ++ +   V    V     R L      L  + W G      E
Subjt:  RYHHDVSLCLSGLSLVFGVGRLRCFLLLAGYSLFSRFCRVFRFIGPVCSFFK-LGLLMMLSKFCVVSCGRVVRASGRGLRWHGLRLALYRWLGCRPIFFE

Query:  GSVIGLFVLRLTSLGVGGIFFLSRMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLGVECVGCV
            G  V         G+F +S  L  L                    R VR                P  S  W                        
Subjt:  GSVIGLFVLRLTSLGVGGIFFLSRMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLGVECVGCV

Query:  AAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCVGFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWSTKL
                       GGNI K+SFI WLA+ DRLATRDRLC WD S++VSCVFC G ESWDN+FFECPFSWEVWS MI  AGSS  +SYWST+L
Subjt:  AAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCVGFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWSTKL

TrEMBL top hitse value%identityAlignment
A0A1S3BSI8 uncharacterized protein LOC1034932252.3e-3233.89Show/hide
Query:  MVMEVLSRMLNKPPPGFWFHQKCDM----LAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHRRYHHDVSLCLSGLSLVFGVGR
        MVMEVLSRMLNK P  F FH +C+     L+GL AN +KSS F AG+ +    +LAA   F  G+LPV YLG+PLL+ R   +D   C+  +  +    R
Subjt:  MVMEVLSRMLNKPPPGFWFHQKCDM----LAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHRRYHHDVSLCLSGLSLVFGVGR

Query:  LRCFLLLAGYSLFSRFCRVFRFIGP---VCSFFKLGLLMMLSKFCVVSCGRVVRASGRGLR----WHGLRLALYRWLGCRPIFFEGSV----IGLFVLRL
        +R           SR  RV  F G    VCS   L  L +      V    V    G G+R    W         WL    +   GS+    +  +VL+ 
Subjt:  LRCFLLLAGYSLFSRFCRVFRFIGP---VCSFFKLGLLMMLSKFCVVSCGRVVRASGRGLR----WHGLRLALYRWLGCRPIFFEGSV----IGLFVLRL

Query:  TSL-----GVGGIFFLS-------------RMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLG
         SL      VG  + L              RM  G     R+ +   +  G  L   G R +     R    L    G   +W     R   S+  ++  
Subjt:  TSL-----GVGGIFFLS-------------RMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLG

Query:  VECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCV-GFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWST
        +   G    G      +L+   GGNI K+SF  WLA+ DRL TRDR   WDSS+ +SC+ C  G ES D++FF CPF  +VWSR++    SSH + +W  
Subjt:  VECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCV-GFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWST

Query:  KLAWICHISAGKSARR
        +L+WICH    K  RR
Subjt:  KLAWICHISAGKSARR

A0A5A7UP65 Reverse transcriptase2.5e-3133.41Show/hide
Query:  MVMEVLSRMLNKPPPGFWFHQKCDM----LAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHRRYHHDVSLCLSGLSLVFGVGR
        MVMEVLSRMLNK P  F FH +C+     L+GL AN +KSS F AG+ +    +LAA   F  G+LPV YLG+PLL+ R   +D   C+  +  +    R
Subjt:  MVMEVLSRMLNKPPPGFWFHQKCDM----LAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHRRYHHDVSLCLSGLSLVFGVGR

Query:  LRCFLLLAGYSLFSRFCRVFRFIGP---VCSFFKLGLLMMLSKFCVVSCGRVVRASGRGLR----WHGLRLALYRWLGCRPIFFEGSV----IGLFVLRL
        +R           SR  RV  F G    VCS     L +  +   V+         G G+R    W         WL    +   GS+    +  +VL+ 
Subjt:  LRCFLLLAGYSLFSRFCRVFRFIGP---VCSFFKLGLLMMLSKFCVVSCGRVVRASGRGLR----WHGLRLALYRWLGCRPIFFEGSV----IGLFVLRL

Query:  TSL-----GVGGIFFLS-------------RMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLG
         SL      VG  + L              RM  G     R+ +   +  G  L   G R +     R    L    G   +W     R   S+  ++  
Subjt:  TSL-----GVGGIFFLS-------------RMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLG

Query:  VECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCV-GFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWST
        +   G    G      +L+   GGNI K+SF  WLA+ DRL TRDR   WDSS+ +SC+ C  G ES D++FF CPF  +VWSR++    SSH + +W  
Subjt:  VECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCV-GFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWST

Query:  KLAWICHISAGKSARR
        +L+WICH    K  RR
Subjt:  KLAWICHISAGKSARR

A0A5D3D7P6 Reverse transcriptase2.5e-3133.41Show/hide
Query:  MVMEVLSRMLNKPPPGFWFHQKCDM----LAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHRRYHHDVSLCLSGLSLVFGVGR
        MVMEVLSRMLNK P  F FH +C+     L+GL AN +KSS F AG+ +    +LAA   F  G+LPV YLG+PLL+ R   +D   C+  +  +    R
Subjt:  MVMEVLSRMLNKPPPGFWFHQKCDM----LAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHRRYHHDVSLCLSGLSLVFGVGR

Query:  LRCFLLLAGYSLFSRFCRVFRFIGP---VCSFFKLGLLMMLSKFCVVSCGRVVRASGRGLR----WHGLRLALYRWLGCRPIFFEGSV----IGLFVLRL
        +R           SR  RV  F G    VCS     L +  +   V+         G G+R    W         WL    +   GS+    +  +VL+ 
Subjt:  LRCFLLLAGYSLFSRFCRVFRFIGP---VCSFFKLGLLMMLSKFCVVSCGRVVRASGRGLR----WHGLRLALYRWLGCRPIFFEGSV----IGLFVLRL

Query:  TSL-----GVGGIFFLS-------------RMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLG
         SL      VG  + L              RM  G     R+ +   +  G  L   G R +     R    L    G   +W     R   S+  ++  
Subjt:  TSL-----GVGGIFFLS-------------RMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLG

Query:  VECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCV-GFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWST
        +   G    G      +L+   GGNI K+SF  WLA+ DRL TRDR   WDSS+ +SC+ C  G ES D++FF CPF  +VWSR++    SSH + +W  
Subjt:  VECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCV-GFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWST

Query:  KLAWICHISAGKSARR
        +L+WICH    K  RR
Subjt:  KLAWICHISAGKSARR

A0A6J1D875 uncharacterized protein LOC1110178111.9e-3940Show/hide
Query:  MEVLSRMLNKPPPGFWFHQKCD-----------------------------------MLAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYL
        M VLSRMLN+  P F FH+KCD                                    LAGLVANT+KSSFFG G+PDV+VEQLAAF DFSV S PV YL
Subjt:  MEVLSRMLNKPPPGFWFHQKCD-----------------------------------MLAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYL

Query:  GVPLLSHRRYHHDVSLCLSGLSLVFGVGRLRCFLLLAGYSLFSRFCRVFRFIGPVCSFFKLGLLM-MLSKFCVVSCGRVVRASGRGLRWHGLRLALYRWL
        GVPL S R  HHD    L  +     V R           ++S   R+F F        +L L+  +L  F      +VV  +  G    G         
Subjt:  GVPLLSHRRYHHDVSLCLSGLSLVFGVGRLRCFLLLAGYSLFSRFCRVFRFIGPVCSFFKLGLLM-MLSKFCVVSCGRVVRASGRGLRWHGLRLALYRWL

Query:  GCRPIFFEGSVIGLFV--LRLTSLGVGG-IFFLSRMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVG
             + E +++ L+V  L +  L VGG IFFLS MLF LWF LRLEMVSVVLFGMTL F            +S +       S DW      +     G
Subjt:  GCRPIFFEGSVIGLFV--LRLTSLGVGG-IFFLSRMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVG

Query:  SFLGVECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCVGFES
         F        +                GNI K+SFI WLAV DRLAT DRL  WDSSI VSCVFCV FES
Subjt:  SFLGVECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCVGFES

A0A6J1DTG0 uncharacterized protein LOC1110241651.6e-3333.5Show/hide
Query:  MEVLSRMLNKPPPGFWFHQKCDML---------------------------AGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHR
        MEVLSR+LNK P GF FH KC+ +                             +     +   FG GLP V+ ++LAAF  FSV SL V YLGV LLS R
Subjt:  MEVLSRMLNKPPPGFWFHQKCDML---------------------------AGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHR

Query:  RYHHDVSLCLSGLSLVFGVGRLRCFLLLAGYSLFSRFCRVFRFIGPVCSFFK-LGLLMMLSKFCVVSCGRVVRASGRGLRWHGLRLALYRWLGCRPIFFE
          HHD    L  +                        CRV  +   + SF   L L+ ++ +   V    V     R L      L  + W G      E
Subjt:  RYHHDVSLCLSGLSLVFGVGRLRCFLLLAGYSLFSRFCRVFRFIGPVCSFFK-LGLLMMLSKFCVVSCGRVVRASGRGLRWHGLRLALYRWLGCRPIFFE

Query:  GSVIGLFVLRLTSLGVGGIFFLSRMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLGVECVGCV
            G  V         G+F +S  L  L                    R VR                P  S  W                        
Subjt:  GSVIGLFVLRLTSLGVGGIFFLSRMLFGLWFGLRLEMVSVVLFGMTLCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLGVECVGCV

Query:  AAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCVGFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWSTKL
                       GGNI K+SFI WLA+ DRLATRDRLC WD S++VSCVFC G ESWDN+FFECPFSWEVWS MI  AGSS  +SYWST+L
Subjt:  AAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCVGFESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWSTKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein8.1e-0638.98Show/hide
Query:  GNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFC-VGFESWDNMFFECPFSWEVW
        G I K++FI W+ +  RL T+DR+  W       C+FC    E+  ++FF+C F+ EVW
Subjt:  GNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFC-VGFESWDNMFFECPFSWEVW

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.6e-0744.44Show/hide
Query:  KYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCVGF-ESWDNMFFECPFSWEV
        KYS + W+A+ +RL T DR+  W++    SCV C    E+ D++FF CP+S EV
Subjt:  KYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCVGF-ESWDNMFFECPFSWEV

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.3e-0734.83Show/hide
Query:  NILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCVGF-ESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWSTKLAWICHISAGKS
        ++ K++FI W+   +RL TRDRL  W  SI   C+ C    +S  ++FFEC FS  VW R  T++ + +  +     L W+   S  K+
Subjt:  NILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCVGF-ESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWSTKLAWICHISAGKS

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.2e-0637.93Show/hide
Query:  GNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCVGF-ESWDNMFFECPFSWEV
        G I K++FI+W+ +  RL TRD+L  W   +   C+ C  F E+  ++FF+C F+ E+
Subjt:  GNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCVGF-ESWDNMFFECPFSWEV

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.5e-0747.37Show/hide
Query:  ILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCV-GFESWDNMFFECPFSWEVW
        I ++S ITW++  +RL TRDRL GW  +I  S V C  G E+  ++FFEC FS  +W
Subjt:  ILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCV-GFESWDNMFFECPFSWEVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATGGAGGTGTTGTCTCGGATGTTGAATAAGCCGCCGCCGGGTTTCTGGTTTCATCAGAAGTGTGATATGTTGGCGGGGCTTGTGGCGAATACTCAGAAGAGCTC
GTTTTTTGGGGCTGGTCTTCCTGATGTTAAGGTGGAGCAGTTGGCAGCTTTCTTCGATTTTTCGGTGGGTTCGCTTCCTGTGTGTTACCTCGGGGTTCCGCTCCTTTCGC
ACCGGCGCTATCATCATGATGTCAGCCTCTGCTTGAGCGGATTGTCTCTCGTGTTCGGAGTTGGTCGGCTCAGATGCTTTCTTTTGCTGGCCGGTTACAGCTTATTCAGT
CGGTTTTGCAGAGTGTTCAGGTTTATTGGACCAGTGTGTTCCTTCTTCAAGCTCGGGTTGCTCATGATGTTGAGCAAATTCTGCGTTGTTTCTTGTGGAAGGGTCGTGAG
AGCGAGCGGTCGGGGACTAAGGTGGCATGGTCTGAGGCTGGCTCTCTATAGGTGGCTTGGGTGTAGGCCTATATTCTTCGAAGGGAGTGTAATTGGACTGTTCGTGCTTC
GCCTCACTTCTCTTGGTGTTGGCGGGATATTCTTTCTGTCCAGGATGCTTTTTGGCCTTTGGTTCGGTTTGCGATTGGAGATGGTAAGCGTTGTTTTGTTTGGCATGACG
CTTTGCTTCCGGGGGGTTCGATTTATCCGATGTTTGGTGATCAGATTATCAACGATGCTGCAAGCTTGTCCCGGGCAAAGTTTTGATTGGGAGGGAAGATGTGCCCGTTT
CGATTCCAGTGTCGTCGGGTCTTTTCTCGGTGTCGAGTGCGTGGGATGTGTTGCGGCCGGCTTAGCCTCCTGTTCCTTGGTTCTCTTTGCTTTGGTTGGTGGGAACATTC
TGAAGTATTCTTTCATTACTTGGTTGGCGGTGTGTGATCGGCTTGCTACGCGAGATCGCTTATGTGGTTGGGATTCTTCTATTCTTGTTTCCTGTGTGTTTTGTGTTGGC
TTTGAGTCCTGGGATAATATGTTCTTTGAGTGCCCTTTTAGTTGGGAGGTCTGGTCTCGAATGATTACCTCGGCTGGTTCTTCTCACTGGGTTTCATATTGGTCTACTAA
GCTTGCTTGGATTTGTCACATTAGTGCTGGGAAGTCTGCTCGTCGTGGTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCATGGAGGTGTTGTCTCGGATGTTGAATAAGCCGCCGCCGGGTTTCTGGTTTCATCAGAAGTGTGATATGTTGGCGGGGCTTGTGGCGAATACTCAGAAGAGCTC
GTTTTTTGGGGCTGGTCTTCCTGATGTTAAGGTGGAGCAGTTGGCAGCTTTCTTCGATTTTTCGGTGGGTTCGCTTCCTGTGTGTTACCTCGGGGTTCCGCTCCTTTCGC
ACCGGCGCTATCATCATGATGTCAGCCTCTGCTTGAGCGGATTGTCTCTCGTGTTCGGAGTTGGTCGGCTCAGATGCTTTCTTTTGCTGGCCGGTTACAGCTTATTCAGT
CGGTTTTGCAGAGTGTTCAGGTTTATTGGACCAGTGTGTTCCTTCTTCAAGCTCGGGTTGCTCATGATGTTGAGCAAATTCTGCGTTGTTTCTTGTGGAAGGGTCGTGAG
AGCGAGCGGTCGGGGACTAAGGTGGCATGGTCTGAGGCTGGCTCTCTATAGGTGGCTTGGGTGTAGGCCTATATTCTTCGAAGGGAGTGTAATTGGACTGTTCGTGCTTC
GCCTCACTTCTCTTGGTGTTGGCGGGATATTCTTTCTGTCCAGGATGCTTTTTGGCCTTTGGTTCGGTTTGCGATTGGAGATGGTAAGCGTTGTTTTGTTTGGCATGACG
CTTTGCTTCCGGGGGGTTCGATTTATCCGATGTTTGGTGATCAGATTATCAACGATGCTGCAAGCTTGTCCCGGGCAAAGTTTTGATTGGGAGGGAAGATGTGCCCGTTT
CGATTCCAGTGTCGTCGGGTCTTTTCTCGGTGTCGAGTGCGTGGGATGTGTTGCGGCCGGCTTAGCCTCCTGTTCCTTGGTTCTCTTTGCTTTGGTTGGTGGGAACATTC
TGAAGTATTCTTTCATTACTTGGTTGGCGGTGTGTGATCGGCTTGCTACGCGAGATCGCTTATGTGGTTGGGATTCTTCTATTCTTGTTTCCTGTGTGTTTTGTGTTGGC
TTTGAGTCCTGGGATAATATGTTCTTTGAGTGCCCTTTTAGTTGGGAGGTCTGGTCTCGAATGATTACCTCGGCTGGTTCTTCTCACTGGGTTTCATATTGGTCTACTAA
GCTTGCTTGGATTTGTCACATTAGTGCTGGGAAGTCTGCTCGTCGTGGTGTGTGA
Protein sequenceShow/hide protein sequence
MVMEVLSRMLNKPPPGFWFHQKCDMLAGLVANTQKSSFFGAGLPDVKVEQLAAFFDFSVGSLPVCYLGVPLLSHRRYHHDVSLCLSGLSLVFGVGRLRCFLLLAGYSLFS
RFCRVFRFIGPVCSFFKLGLLMMLSKFCVVSCGRVVRASGRGLRWHGLRLALYRWLGCRPIFFEGSVIGLFVLRLTSLGVGGIFFLSRMLFGLWFGLRLEMVSVVLFGMT
LCFRGVRFIRCLVIRLSTMLQACPGQSFDWEGRCARFDSSVVGSFLGVECVGCVAAGLASCSLVLFALVGGNILKYSFITWLAVCDRLATRDRLCGWDSSILVSCVFCVG
FESWDNMFFECPFSWEVWSRMITSAGSSHWVSYWSTKLAWICHISAGKSARRGV