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MS027270 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027270
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 2
Genome locationscaffold435:268102..270782
RNA-Seq ExpressionMS027270
SyntenyMS027270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4074366.1 unnamed protein product [Lactuca saligna]2.4e-0493.1Show/hide
Query:  AGNNRKEGVHVAAAPAPFLVNGAAGSGST
        AGNNRKEGVHVAAAPAP LVNGAAGS ST
Subjt:  AGNNRKEGVHVAAAPAPFLVNGAAGSGST

P15688.2 RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName: Full=NADH dehydrogenase subunit 2 [Beta vulgaris]4.1e-0438.18Show/hide
Query:  LTLFIIMVNHCIKMSIAGNNRKEGVHVAAAPAPFLVNGAAGSGSTLWSFAAVSNLHFLFPVVFLSDVQTFINEDKRRRLC-TSSGLSSTRCTMTENETGN
        L L  ++ N       AGNNRKEGVHVAAA APFLVN AAGS +T         +HF                D    +    SG++ T   M  N  G+
Subjt:  LTLFIIMVNHCIKMSIAGNNRKEGVHVAAAPAPFLVNGAAGSGSTLWSFAAVSNLHFLFPVVFLSDVQTFINEDKRRRLC-TSSGLSSTRCTMTENETGN

Query:  VQRRLLETKI
        VQR L   +I
Subjt:  VQRRLLETKI

PRQ15618.1 putative NADH:ubiquinone reductase (H(+)-translocating) [Rosa chinensis]2.8e-0593.33Show/hide
Query:  AGNNRKEGVHVAAAPAPFLVNGAAGSGSTL
        AGNNRKEGVHVAAAPAPFLVNGAAGS ST+
Subjt:  AGNNRKEGVHVAAAPAPFLVNGAAGSGSTL

QVJ97907.1 hypothetical protein [Apium graveolens]2.4e-0493.1Show/hide
Query:  AGNNRKEGVHVAAAPAPFLVNGAAGSGST
        AGNNRKEGVHVAAAPAP LVNGAAGS ST
Subjt:  AGNNRKEGVHVAAAPAPFLVNGAAGSGST

TXG46226.1 hypothetical protein EZV62_028257 [Acer yangbiense]4.8e-0596.55Show/hide
Query:  AGNNRKEGVHVAAAPAPFLVNGAAGSGST
        AGNNRKEGVHVAAAPAPFLVNGAAGS ST
Subjt:  AGNNRKEGVHVAAAPAPFLVNGAAGSGST

TrEMBL top hitse value%identityAlignment
A0A2P6P115 Putative NADH:ubiquinone reductase (H(+)-translocating)1.4e-0593.33Show/hide
Query:  AGNNRKEGVHVAAAPAPFLVNGAAGSGSTL
        AGNNRKEGVHVAAAPAPFLVNGAAGS ST+
Subjt:  AGNNRKEGVHVAAAPAPFLVNGAAGSGSTL

A0A4P8PNV1 Uncharacterized protein2.0e-0493.1Show/hide
Query:  AGNNRKEGVHVAAAPAPFLVNGAAGSGST
        AGNNRKEGVHVAAA APFLVNGAAGS ST
Subjt:  AGNNRKEGVHVAAAPAPFLVNGAAGSGST

A0A5C7GPU8 Proton_antipo_M domain-containing protein2.3e-0596.55Show/hide
Query:  AGNNRKEGVHVAAAPAPFLVNGAAGSGST
        AGNNRKEGVHVAAAPAPFLVNGAAGS ST
Subjt:  AGNNRKEGVHVAAAPAPFLVNGAAGSGST

A0A6A5L5E6 Uncharacterized protein2.0e-0493.1Show/hide
Query:  AGNNRKEGVHVAAAPAPFLVNGAAGSGST
        AGNNRKEGVHVAAA APFLVNGAAGS ST
Subjt:  AGNNRKEGVHVAAAPAPFLVNGAAGSGST

A0A6S7M0F5 Uncharacterized protein1.1e-0493.1Show/hide
Query:  AGNNRKEGVHVAAAPAPFLVNGAAGSGST
        AGNNRKEGVHVAAAPAP LVNGAAGS ST
Subjt:  AGNNRKEGVHVAAAPAPFLVNGAAGSGST

SwissProt top hitse value%identityAlignment
P15688 NADH-ubiquinone oxidoreductase chain 25.3e-0738.18Show/hide
Query:  LTLFIIMVNHCIKMSIAGNNRKEGVHVAAAPAPFLVNGAAGSGSTLWSFAAVSNLHFLFPVVFLSDVQTFINEDKRRRLC-TSSGLSSTRCTMTENETGN
        L L  ++ N       AGNNRKEGVHVAAA APFLVN AAGS +T         +HF                D    +    SG++ T   M  N  G+
Subjt:  LTLFIIMVNHCIKMSIAGNNRKEGVHVAAAPAPFLVNGAAGSGSTLWSFAAVSNLHFLFPVVFLSDVQTFINEDKRRRLC-TSSGLSSTRCTMTENETGN

Query:  VQRRLLETKI
        VQR L   +I
Subjt:  VQRRLLETKI

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCACCACATCTTTGCCGCCGCCCACGGCGGAGTCGCCATTGACTCTATTTATTATTATGGTAAATCACTGTATCAAGATGTCAATCGCTGGCAACAACAGAAAGGA
AGGGGTCCATGTAGCTGCTGCGCCCGCCCCCTTCTTAGTCAATGGGGCAGCAGGTTCGGGCAGTACTCTTTGGTCATTTGCTGCCGTCTCCAACCTCCATTTTTTATTCC
CCGTCGTCTTCCTTTCAGACGTCCAGACCTTCATCAACGAGGACAAGAGACGTCGTTTGTGTACTTCTTCAGGGCTTTCATCAACGAGATGTACAATGACGGAAAATGAG
ACGGGGAACGTACAAAGACGGCTGCTGGAGACGAAAATTGAAGCAGACGAAAGGAAACTTATCGATACGGCGGCGTCAGACCGGAACAGTCACGACGGCATTAGACGACG
GGCGACGAACGGTTACAGAACTCAGAGACGGCAGCAGACGGAGGAAGCGAAAAAGTCTCCGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCACCACATCTTTGCCGCCGCCCACGGCGGAGTCGCCATTGACTCTATTTATTATTATGGTAAATCACTGTATCAAGATGTCAATCGCTGGCAACAACAGAAAGGA
AGGGGTCCATGTAGCTGCTGCGCCCGCCCCCTTCTTAGTCAATGGGGCAGCAGGTTCGGGCAGTACTCTTTGGTCATTTGCTGCCGTCTCCAACCTCCATTTTTTATTCC
CCGTCGTCTTCCTTTCAGACGTCCAGACCTTCATCAACGAGGACAAGAGACGTCGTTTGTGTACTTCTTCAGGGCTTTCATCAACGAGATGTACAATGACGGAAAATGAG
ACGGGGAACGTACAAAGACGGCTGCTGGAGACGAAAATTGAAGCAGACGAAAGGAAACTTATCGATACGGCGGCGTCAGACCGGAACAGTCACGACGGCATTAGACGACG
GGCGACGAACGGTTACAGAACTCAGAGACGGCAGCAGACGGAGGAAGCGAAAAAGTCTCCGATTTAG
Protein sequenceShow/hide protein sequence
MTTTSLPPPTAESPLTLFIIMVNHCIKMSIAGNNRKEGVHVAAAPAPFLVNGAAGSGSTLWSFAAVSNLHFLFPVVFLSDVQTFINEDKRRRLCTSSGLSSTRCTMTENE
TGNVQRRLLETKIEADERKLIDTAASDRNSHDGIRRRATNGYRTQRRQQTEEAKKSPI