; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027273 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027273
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionInvolucrin
Genome locationscaffold435:576759..577331
RNA-Seq ExpressionMS027273
SyntenyMS027273
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAA35473.1 involucrin [Gorilla gorilla]1.2e-0426.7Show/hide
Query:  HLD-EIGKANLPLNPRNIGDYLDQRGRDYQLTLKPRKIIDHI--------DQEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLI
        HL+ + G+  LP        +L+Q+    +L  +    ++H+         QEG+V+HL  +  +++   +QEG++ HL  +Q ++G    Q G+ N+L 
Subjt:  HLD-EIGKANLPLNPRNIGDYLDQRGRDYQLTLKPRKIIDHI--------DQEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLI

Query:  LKPRQIGDHIGEEGRVNHLPLRPRQIGDHLDQGGKVDHLPVRPKQIGDHLGQGGRANHLPFRLRQIGDHLDQRGKL
         + +Q+     +EG++ HL  +  Q+     Q G+  HL  + KQ+     Q G+  HL  +  Q+ D   Q+G+L
Subjt:  LKPRQIGDHIGEEGRVNHLPLRPRQIGDHLDQGGKVDHLPVRPKQIGDHLGQGGRANHLPFRLRQIGDHLDQRGKL

RHN46048.1 hypothetical protein MtrunA17_Chr7g0238031 [Medicago truncatula]2.7e-0418.13Show/hide
Query:  EVKAHLDEIGKANLPLN-PRNIGDYLDQRGRDYQLTLKPRKIIDHIDQEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLILKPR
        E+++ ++E G+    ++ P  +   +++ G      L P ++   I++EG+ +H    P +++ ++++EG   H +L   E+   +++ G   H +  P 
Subjt:  EVKAHLDEIGKANLPLN-PRNIGDYLDQRGRDYQLTLKPRKIIDHIDQEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLILKPR

Query:  QIGDHIGEEGRVNHLPLRPRQIGDHLDQGGKVDHLPVRPKQIGDHLGQGGRANHLPFRLRQIGDHLDQRGK
        ++   + EEG   H    P ++   +++ G+ +H    P ++   + + G   H      ++   +++ G+
Subjt:  QIGDHIGEEGRVNHLPLRPRQIGDHLDQGGKVDHLPVRPKQIGDHLGQGGRANHLPFRLRQIGDHLDQRGK

XP_039684185.1 involucrin-like [Medicago truncatula]2.7e-0418.13Show/hide
Query:  EVKAHLDEIGKANLPLN-PRNIGDYLDQRGRDYQLTLKPRKIIDHIDQEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLILKPR
        E+++ ++E G+    ++ P  +   +++ G      L P ++   I++EG+ +H    P +++ ++++EG   H +L   E+   +++ G   H +  P 
Subjt:  EVKAHLDEIGKANLPLN-PRNIGDYLDQRGRDYQLTLKPRKIIDHIDQEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLILKPR

Query:  QIGDHIGEEGRVNHLPLRPRQIGDHLDQGGKVDHLPVRPKQIGDHLGQGGRANHLPFRLRQIGDHLDQRGK
        ++   + EEG   H    P ++   +++ G+ +H    P ++   + + G   H      ++   +++ G+
Subjt:  QIGDHIGEEGRVNHLPLRPRQIGDHLDQGGKVDHLPVRPKQIGDHLGQGGRANHLPFRLRQIGDHLDQRGK

TrEMBL top hitse value%identityAlignment
A0A1B8Y1P5 Uncharacterized protein (Fragment)3.3e-0834.59Show/hide
Query:  ANLPLNPRNIGDYLDQRGRDYQLTLKPRKIIDHIDQEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLILKPRQIGDHIGEEGRV
        A+L    + I D L Q G+   LT   + I D + QEGK   L    + I D L QEG+   L   Q+ I D L Q G+   L    + I D + +EG+ 
Subjt:  ANLPLNPRNIGDYLDQRGRDYQLTLKPRKIIDHIDQEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLILKPRQIGDHIGEEGRV

Query:  NHLPLRPRQIGDHLDQGGKVDHLPVRPKQIGDHLGQGGRANHLPFRLRQIGDHLDQRGK
          L    + I D L Q GK   L    K I D L Q G+   L    + I D L Q GK
Subjt:  NHLPLRPRQIGDHLDQGGKVDHLPVRPKQIGDHLGQGGRANHLPFRLRQIGDHLDQRGK

A0A396GZX8 Uncharacterized protein1.3e-0418.13Show/hide
Query:  EVKAHLDEIGKANLPLN-PRNIGDYLDQRGRDYQLTLKPRKIIDHIDQEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLILKPR
        E+++ ++E G+    ++ P  +   +++ G      L P ++   I++EG+ +H    P +++ ++++EG   H +L   E+   +++ G   H +  P 
Subjt:  EVKAHLDEIGKANLPLN-PRNIGDYLDQRGRDYQLTLKPRKIIDHIDQEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLILKPR

Query:  QIGDHIGEEGRVNHLPLRPRQIGDHLDQGGKVDHLPVRPKQIGDHLGQGGRANHLPFRLRQIGDHLDQRGK
        ++   + EEG   H    P ++   +++ G+ +H    P ++   + + G   H      ++   +++ G+
Subjt:  QIGDHIGEEGRVNHLPLRPRQIGDHLDQGGKVDHLPVRPKQIGDHLGQGGRANHLPFRLRQIGDHLDQRGK

G3QHA1 Involucrin_N domain-containing protein1.5e-0530Show/hide
Query:  IDHIDQEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLILKPRQIGDHIGEEGRVNHLPLRPRQIGDHLDQGGKVDHLPVRPKQI
        ++H+ QEG+V+HL  +  +++   +QEG++ HL  +Q ++G    Q G+ N+L  + +Q+     +EG++ HL  +  Q+     Q G+  HL  + KQ+
Subjt:  IDHIDQEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLILKPRQIGDHIGEEGRVNHLPLRPRQIGDHLDQGGKVDHLPVRPKQI

Query:  GDHLGQGGRANHLPFRLRQIGDHLDQRGKL
             Q G+  HL  +  Q+ D   Q+G+L
Subjt:  GDHLGQGGRANHLPFRLRQIGDHLDQRGKL

Q28423 Involucrin4.9e-0430.4Show/hide
Query:  QEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLILKPRQIGDHIGEEGRVNHLPLRPRQIGDHLDQGGKVDHLPVRPKQIGDHLG
        QEG+V+HL  +  +++   +QEG++ HL  +Q ++G    Q G+ N+L  + +Q+     +EG++ HL  +  Q+     Q G+  HL  + KQ+     
Subjt:  QEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLILKPRQIGDHIGEEGRVNHLPLRPRQIGDHLDQGGKVDHLPVRPKQIGDHLG

Query:  QGGRANHLPFRLRQIGDHLDQRGKL
        Q G+  HL  +  Q+ D   Q+G+L
Subjt:  QGGRANHLPFRLRQIGDHLDQRGKL

Q28425 Involucrin5.8e-0526.7Show/hide
Query:  HLD-EIGKANLPLNPRNIGDYLDQRGRDYQLTLKPRKIIDHI--------DQEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLI
        HL+ + G+  LP        +L+Q+    +L  +    ++H+         QEG+V+HL  +  +++   +QEG++ HL  +Q ++G    Q G+ N+L 
Subjt:  HLD-EIGKANLPLNPRNIGDYLDQRGRDYQLTLKPRKIIDHI--------DQEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLI

Query:  LKPRQIGDHIGEEGRVNHLPLRPRQIGDHLDQGGKVDHLPVRPKQIGDHLGQGGRANHLPFRLRQIGDHLDQRGKL
         + +Q+     +EG++ HL  +  Q+     Q G+  HL  + KQ+     Q G+  HL  +  Q+ D   Q+G+L
Subjt:  LKPRQIGDHIGEEGRVNHLPLRPRQIGDHLDQGGKVDHLPVRPKQIGDHLGQGGRANHLPFRLRQIGDHLDQRGKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGGCCATTTAGAGCAGTGAAAGAGGTTAAAGCCCATCTCGACGAAATAGGTAAAGCTAACCTCCCACTCAACCCAAGAAATATTGGAGACTACCTTGACCAAAG
GGGTAGAGATTATCAATTAACACTTAAGCCAAGAAAGATTATAGACCACATCGACCAAGAAGGTAAAGTTGATCACCTCCCACTTAGGCCAAGAAAGATTAGAGATCAAC
TCGACCAAGAAGGTAGAGTTAATCACCTCCTACTTAGACAAAGAGAGATTGGAGACCACCTCGACCAAGGAGGTAGAGCTAATCACCTCATACTTAAGCCAAGACAGATT
GGAGACCACATTGGTGAAGAAGGTAGAGTTAATCACCTCCCACTTAGGCCAAGACAGATTGGAGACCACCTCGACCAAGGAGGTAAAGTTGATCACCTCCCAGTTAGGCC
AAAACAGATTGGAGACCACCTCGGCCAAGGAGGTAGAGCTAATCACCTCCCATTTAGGCTAAGACAGATTGGAGATCACCTCGACCAAAGAGGTAAGTTGATCATGCATT
TAGATTTTATGGAATTTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGGCCATTTAGAGCAGTGAAAGAGGTTAAAGCCCATCTCGACGAAATAGGTAAAGCTAACCTCCCACTCAACCCAAGAAATATTGGAGACTACCTTGACCAAAG
GGGTAGAGATTATCAATTAACACTTAAGCCAAGAAAGATTATAGACCACATCGACCAAGAAGGTAAAGTTGATCACCTCCCACTTAGGCCAAGAAAGATTAGAGATCAAC
TCGACCAAGAAGGTAGAGTTAATCACCTCCTACTTAGACAAAGAGAGATTGGAGACCACCTCGACCAAGGAGGTAGAGCTAATCACCTCATACTTAAGCCAAGACAGATT
GGAGACCACATTGGTGAAGAAGGTAGAGTTAATCACCTCCCACTTAGGCCAAGACAGATTGGAGACCACCTCGACCAAGGAGGTAAAGTTGATCACCTCCCAGTTAGGCC
AAAACAGATTGGAGACCACCTCGGCCAAGGAGGTAGAGCTAATCACCTCCCATTTAGGCTAAGACAGATTGGAGATCACCTCGACCAAAGAGGTAAGTTGATCATGCATT
TAGATTTTATGGAATTTTATTAA
Protein sequenceShow/hide protein sequence
MWGPFRAVKEVKAHLDEIGKANLPLNPRNIGDYLDQRGRDYQLTLKPRKIIDHIDQEGKVDHLPLRPRKIRDQLDQEGRVNHLLLRQREIGDHLDQGGRANHLILKPRQI
GDHIGEEGRVNHLPLRPRQIGDHLDQGGKVDHLPVRPKQIGDHLGQGGRANHLPFRLRQIGDHLDQRGKLIMHLDFMEFY