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MS027296 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027296
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionacanthoscurrin-1-like
Genome locationscaffold373:867346..871858
RNA-Seq ExpressionMS027296
SyntenyMS027296
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ13441.1 hypothetical protein Acr_23g0018260 [Actinidia rufa]4.3e-1360.16Show/hide
Query:  ALYMLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGG
        A + +ML+VA+ A A QA+AR  P+D      +GL DQKN + +GG+GG+SG+G NGLP+GGIGG+ G GGGLGGLGG  GGLGGLGG  GG+  GG+GG
Subjt:  ALYMLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGG

Query:  IGVGIGGGALGGIGGIGGG-GGF
         G G+GGGA GG+GG+GG  GGF
Subjt:  IGVGIGGGALGGIGGIGGG-GGF

XP_008447334.1 PREDICTED: acanthoscurrin-2-like [Cucumis melo]1.7e-1768.33Show/hide
Query:  LMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGGIGVG
        LMLV+AMAA A+  +AR AP +    A +GL DQKN LNYGG+GGFSGIGD GLP GG     G GG  GGLGGG GGLGGLGGG+GG+GG GIGGIG G
Subjt:  LMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGGIGVG

Query:  IGGGALGGIGGIGGGGGFVR
        +GGG +GGIGGIGGGGG V+
Subjt:  IGGGALGGIGGIGGGGGFVR

XP_011652144.1 glycine-rich cell wall structural protein 1 [Cucumis sativus]7.5e-1867.77Show/hide
Query:  MLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGGIGV
        ML++ +AMAAFA   +AR  P   +D A +GL DQKN LNYGG+GGFSGIGD+GLP GG     G+GG  GGLGGG GGLGGLGGGIGG+GG GIGGIG 
Subjt:  MLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGGIGV

Query:  GIGGGALGGIGGIGGGGGFVR
        G+GGG +GGIGGIGGGGG V+
Subjt:  GIGGGALGGIGGIGGGGGFVR

XP_022158230.1 acanthoscurrin-1-like [Momordica charantia]1.2e-47100Show/hide
Query:  MAKKALYMLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGG
        MAKKALYMLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGG
Subjt:  MAKKALYMLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGG

Query:  GIGGIGVGIGGGALGGIGGIGGGGGFVR
        GIGGIGVGIGGGALGGIGGIGGGGGFVR
Subjt:  GIGGIGVGIGGGALGGIGGIGGGGGFVR

XP_038887967.1 acanthoscurrin-1-like [Benincasa hispida]2.9e-1770Show/hide
Query:  LMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGGIGVG
        LMLV+AMAAFAV  +AR AP +    AG+GL DQKN LNYGG+GG  GIGD+GLP GG GG+ G     GGLGGG GGLGGLGGGIGG GG GIGGIG G
Subjt:  LMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGGIGVG

Query:  IGGGALGGIGGIGGGGGFVR
        IGGG    IGGIGGGGGFV+
Subjt:  IGGGALGGIGGIGGGGGFVR

TrEMBL top hitse value%identityAlignment
A0A0A0LEM4 Uncharacterized protein3.6e-1867.77Show/hide
Query:  MLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGGIGV
        ML++ +AMAAFA   +AR  P   +D A +GL DQKN LNYGG+GGFSGIGD+GLP GG     G+GG  GGLGGG GGLGGLGGGIGG+GG GIGGIG 
Subjt:  MLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGGIGV

Query:  GIGGGALGGIGGIGGGGGFVR
        G+GGG +GGIGGIGGGGG V+
Subjt:  GIGGGALGGIGGIGGGGGFVR

A0A1S3BI24 acanthoscurrin-2-like8.1e-1868.33Show/hide
Query:  LMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGGIGVG
        LMLV+AMAA A+  +AR AP +    A +GL DQKN LNYGG+GGFSGIGD GLP GG     G GG  GGLGGG GGLGGLGGG+GG+GG GIGGIG G
Subjt:  LMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGGIGVG

Query:  IGGGALGGIGGIGGGGGFVR
        +GGG +GGIGGIGGGGG V+
Subjt:  IGGGALGGIGGIGGGGGFVR

A0A5A7UCJ9 Acanthoscurrin-2-like8.1e-1868.33Show/hide
Query:  LMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGGIGVG
        LMLV+AMAA A+  +AR AP +    A +GL DQKN LNYGG+GGFSGIGD GLP GG     G GG  GGLGGG GGLGGLGGG+GG+GG GIGGIG G
Subjt:  LMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGGIGVG

Query:  IGGGALGGIGGIGGGGGFVR
        +GGG +GGIGGIGGGGG V+
Subjt:  IGGGALGGIGGIGGGGGFVR

A0A6J1DV95 acanthoscurrin-1-like5.8e-48100Show/hide
Query:  MAKKALYMLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGG
        MAKKALYMLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGG
Subjt:  MAKKALYMLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGG

Query:  GIGGIGVGIGGGALGGIGGIGGGGGFVR
        GIGGIGVGIGGGALGGIGGIGGGGGFVR
Subjt:  GIGGIGVGIGGGALGGIGGIGGGGGFVR

A0A7J0GRN0 Uncharacterized protein2.1e-1360.16Show/hide
Query:  ALYMLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGG
        A + +ML+VA+ A A QA+AR  P+D      +GL DQKN + +GG+GG+SG+G NGLP+GGIGG+ G GGGLGGLGG  GGLGGLGG  GG+  GG+GG
Subjt:  ALYMLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGG

Query:  IGVGIGGGALGGIGGIGGG-GGF
         G G+GGGA GG+GG+GG  GGF
Subjt:  IGVGIGGGALGGIGGIGGG-GGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04660.1 glycine-rich protein3.9e-0460.49Show/hide
Query:  YGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLG--GGIGGYGGGGIGGIGVGIG-GGALGGIGGIGGGGG
        YGG+GG +GIG     +GG+GG+ G+GGG+GGLGG  GG+GGLG  GG+GG G GG+GG+G GIG  G +GG+GG+GG GG
Subjt:  YGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLG--GGIGGYGGGGIGGIGVGIG-GGALGGIGGIGGGGG

AT4G29020.1 glycine-rich protein2.7e-0548.97Show/hide
Query:  ALYMLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVV-------------GLGGGLGGLGGGA---GGLG
        A++++ L+V+ A  A     R APT +    G GL DQKN + + G+GG +GIG  G    G+GGV              G+GGG+GGLGGG    GGLG
Subjt:  ALYMLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVV-------------GLGGGLGGLGGGA---GGLG

Query:  GLGGGIG-GYGGGGIG---GIGVGIGG----GALGGIGGIGGGGG
        GLGGG G G+G GGIG   GIG GIGG    G LGGIGG+GG GG
Subjt:  GLGGGIG-GYGGGGIG---GIGVGIGG----GALGGIGGIGGGGG

AT4G29030.1 Putative membrane lipoprotein5.9e-0552.07Show/hide
Query:  KALYMLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGI-GGVVGLGG--GLGGLGGGAGGL-GGLGGGIGGYGG
        K  + + LV A+A+ A+   AR  P         GL DQKN L YG  GG+SG+GDNGLP GG+ GGV G GG  G GG GG  GGL GGLGGG G   G
Subjt:  KALYMLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGI-GGVVGLGG--GLGGLGGGAGGL-GGLGGGIGGYGG

Query:  GGIG---GIGVGIGGGALGGI
        GG+G   GIG G  GG+ GG+
Subjt:  GGIG---GIGVGIGGGALGGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAAAGGCGCTTTATATGTTAATGTTGGTTGTGGCTATGGCTGCATTTGCAGTCCAGGCTTCAGCAAGAGCTGCCCCAACTGATCATCATGATCCTGCCGGAGA
AGGCCTCAAGGACCAGAAGAACTTGCTCAACTATGGCGGCCTTGGCGGTTTCTCCGGCATTGGGGACAACGGGCTTCCCGTTGGGGGCATTGGCGGGGTAGTCGGGCTCG
GTGGCGGCCTCGGGGGACTTGGCGGAGGAGCTGGTGGGCTAGGTGGTCTCGGGGGTGGCATTGGTGGATACGGTGGGGGCGGCATCGGTGGCATCGGAGTCGGGATTGGC
GGCGGCGCGCTCGGCGGAATTGGTGGTATTGGTGGTGGTGGAGGATTTGTCAGACCGTCTCTATTTTCCGTCTCCAACCGACCGTCTCTGCATTTCTTCGCCTCCGCCAC
TGTCTGGGTGCCTCCGTCTTATCCCTTCACCGTCTCCGATATACTTATTCAAAAACTCGCCGTTTCCGTCCGCTCCTTCATCTCCAGTTGTCGTTCCTTCGTCTCCGGTC
CCCCTCCATTGTCGAAGCAGTTCGTCTTCCGTTTATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAAAGGCGCTTTATATGTTAATGTTGGTTGTGGCTATGGCTGCATTTGCAGTCCAGGCTTCAGCAAGAGCTGCCCCAACTGATCATCATGATCCTGCCGGAGA
AGGCCTCAAGGACCAGAAGAACTTGCTCAACTATGGCGGCCTTGGCGGTTTCTCCGGCATTGGGGACAACGGGCTTCCCGTTGGGGGCATTGGCGGGGTAGTCGGGCTCG
GTGGCGGCCTCGGGGGACTTGGCGGAGGAGCTGGTGGGCTAGGTGGTCTCGGGGGTGGCATTGGTGGATACGGTGGGGGCGGCATCGGTGGCATCGGAGTCGGGATTGGC
GGCGGCGCGCTCGGCGGAATTGGTGGTATTGGTGGTGGTGGAGGATTTGTCAGACCGTCTCTATTTTCCGTCTCCAACCGACCGTCTCTGCATTTCTTCGCCTCCGCCAC
TGTCTGGGTGCCTCCGTCTTATCCCTTCACCGTCTCCGATATACTTATTCAAAAACTCGCCGTTTCCGTCCGCTCCTTCATCTCCAGTTGTCGTTCCTTCGTCTCCGGTC
CCCCTCCATTGTCGAAGCAGTTCGTCTTCCGTTTATCCTGA
Protein sequenceShow/hide protein sequence
MAKKALYMLMLVVAMAAFAVQASARAAPTDHHDPAGEGLKDQKNLLNYGGLGGFSGIGDNGLPVGGIGGVVGLGGGLGGLGGGAGGLGGLGGGIGGYGGGGIGGIGVGIG
GGALGGIGGIGGGGGFVRPSLFSVSNRPSLHFFASATVWVPPSYPFTVSDILIQKLAVSVRSFISSCRSFVSGPPPLSKQFVFRLS