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MS027300 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027300
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold373:1387482..1387958
RNA-Seq ExpressionMS027300
SyntenyMS027300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159860.1 uncharacterized protein LOC111026150 [Momordica charantia]1.3e-1543.97Show/hide
Query:  MVDGGRVLGISPLDVDSVVAANEIKCNNIVMYCLWLRHLSVLNSYQAQNWREQLPTISWDDSTSSLYHCSENFHGLEAMMTKQKVGDFGGATTMDLNTNL
        M D   +  ISPLD +S V  ++IK  NIVMY  W RH  VL SY AQNW                             M +QKVGD GGA T+  NT L
Subjt:  MVDGGRVLGISPLDVDSVVAANEIKCNNIVMYCLWLRHLSVLNSYQAQNWREQLPTISWDDSTSSLYHCSENFHGLEAMMTKQKVGDFGGATTMDLNTNL

Query:  EFVEAINLYCIEIR-QHDLRNLHNLSLHVMVENKATWEALI
          VE INL C+EI  QHD  NL N SL V VE+K T++ +I
Subjt:  EFVEAINLYCIEIR-QHDLRNLHNLSLHVMVENKATWEALI
TrEMBL top hitse value%identityAlignment
A0A6J1DZZ2 uncharacterized protein LOC1110261506.1e-1643.97Show/hide
Query:  MVDGGRVLGISPLDVDSVVAANEIKCNNIVMYCLWLRHLSVLNSYQAQNWREQLPTISWDDSTSSLYHCSENFHGLEAMMTKQKVGDFGGATTMDLNTNL
        M D   +  ISPLD +S V  ++IK  NIVMY  W RH  VL SY AQNW                             M +QKVGD GGA T+  NT L
Subjt:  MVDGGRVLGISPLDVDSVVAANEIKCNNIVMYCLWLRHLSVLNSYQAQNWREQLPTISWDDSTSSLYHCSENFHGLEAMMTKQKVGDFGGATTMDLNTNL

Query:  EFVEAINLYCIEIR-QHDLRNLHNLSLHVMVENKATWEALI
          VE INL C+EI  QHD  NL N SL V VE+K T++ +I
Subjt:  EFVEAINLYCIEIR-QHDLRNLHNLSLHVMVENKATWEALI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATGGTGGTCGGGTATTAGGAATCTCTCCATTGGATGTAGATAGTGTTGTTGCAGCTAACGAAATCAAATGCAATAACATTGTTATGTATTGTTTGTGGCTTCG
TCATCTAAGCGTGTTGAATAGTTATCAGGCACAAAATTGGAGAGAACAACTGCCTACGATTTCTTGGGATGACTCTACATCTTCGTTGTATCATTGTTCAGAAAACTTTC
ATGGTCTAGAGGCGATGATGACGAAGCAAAAGGTGGGCGATTTCGGAGGTGCAACGACGATGGACTTAAACACCAATTTAGAATTTGTTGAGGCTATCAATCTTTATTGT
ATTGAGATTCGCCAACATGATTTGAGAAATTTGCATAATCTATCCTTACATGTCATGGTGGAGAATAAGGCAACTTGGGAGGCATTAATTGAGGATTCTCCCCCAACGTC
ATTGAATGAGGATAATTTTTACCTTCACGGATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGATGGTGGTCGGGTATTAGGAATCTCTCCATTGGATGTAGATAGTGTTGTTGCAGCTAACGAAATCAAATGCAATAACATTGTTATGTATTGTTTGTGGCTTCG
TCATCTAAGCGTGTTGAATAGTTATCAGGCACAAAATTGGAGAGAACAACTGCCTACGATTTCTTGGGATGACTCTACATCTTCGTTGTATCATTGTTCAGAAAACTTTC
ATGGTCTAGAGGCGATGATGACGAAGCAAAAGGTGGGCGATTTCGGAGGTGCAACGACGATGGACTTAAACACCAATTTAGAATTTGTTGAGGCTATCAATCTTTATTGT
ATTGAGATTCGCCAACATGATTTGAGAAATTTGCATAATCTATCCTTACATGTCATGGTGGAGAATAAGGCAACTTGGGAGGCATTAATTGAGGATTCTCCCCCAACGTC
ATTGAATGAGGATAATTTTTACCTTCACGGATTTTGA
Protein sequenceShow/hide protein sequence
MVDGGRVLGISPLDVDSVVAANEIKCNNIVMYCLWLRHLSVLNSYQAQNWREQLPTISWDDSTSSLYHCSENFHGLEAMMTKQKVGDFGGATTMDLNTNLEFVEAINLYC
IEIRQHDLRNLHNLSLHVMVENKATWEALIEDSPPTSLNEDNFYLHGF