; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027312 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027312
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold373:2514997..2515374
RNA-Seq ExpressionMS027312
SyntenyMS027312
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650840.1 hypothetical protein Csa_017632 [Cucumis sativus]4.0e-4163.2Show/hide
Query:  MVESCFASPLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPE--SHMFLSRRCKDNGCIW
        ++++   +PLEHW+VQV N+MQ  Q+L LHCKSKDDD G+Q L+ G+ FSW+FR NLWQ TLYWCYM N H+HV+LEVFWPE  S  +LS RC+DN C W
Subjt:  MVESCFASPLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPE--SHMFLSRRCKDNGCIW

Query:  YARDDGIYLKNVPGNKFELQAKWQP
         AR+DGIY+ NVP NKFEL  KW P
Subjt:  YARDDGIYLKNVPGNKFELQAKWQP

KAE8651384.1 hypothetical protein Csa_001671 [Cucumis sativus]5.3e-3355.56Show/hide
Query:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLK
        PL  W V + N+M +  +L + CKSKDDDLG QNL + +QFSW F+ NLWQTTLYWCYMHN  SH +  V+WPE   +L+ RC+   CIW ARDDGIYLK
Subjt:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLK

Query:  NVPGNKFELQAKWQPGL
            N +EL   W+PG+
Subjt:  NVPGNKFELQAKWQPGL

KGN60342.2 hypothetical protein Csa_002569, partial [Cucumis sativus]1.9e-3558.97Show/hide
Query:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLK
        PL  W + + N+M +  TL L CKSKDDDLG QNL + +QFSW F+ NLWQTTLYWCYMHN  SH +  VFWPE   +L+ RC+   CIW ARDDGIYLK
Subjt:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLK

Query:  NVPGNKFELQAKWQPGL
          P N FEL   W+PG+
Subjt:  NVPGNKFELQAKWQPGL

XP_004136434.3 S-protein homolog 1-like [Cucumis sativus]1.9e-3558.97Show/hide
Query:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLK
        PL  W + + N+M +  TL L CKSKDDDLG QNL + +QFSW F+ NLWQTTLYWCYMHN  SH +  VFWPE   +L+ RC+   CIW ARDDGIYLK
Subjt:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLK

Query:  NVPGNKFELQAKWQPGL
          P N FEL   W+PG+
Subjt:  NVPGNKFELQAKWQPGL

XP_004136435.1 S-protein homolog 1-like [Cucumis sativus]5.3e-3355.56Show/hide
Query:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLK
        PL  W V + N+M +  +L + CKSKDDDLG QNL + +QFSW F+ NLWQTTLYWCYMHN  SH +  V+WPE   +L+ RC+   CIW ARDDGIYLK
Subjt:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLK

Query:  NVPGNKFELQAKWQPGL
            N +EL   W+PG+
Subjt:  NVPGNKFELQAKWQPGL

TrEMBL top hitse value%identityAlignment
A0A5E4EJG4 S-protein homolog1.1e-2848.78Show/hide
Query:  CFASPL----EHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPE-SHMFLSRRCKDNGCIWY
        C  SP+      W V V N++ + +TL  HCKSKDDDLG++NL  G +F+W F+ N + TTLYWCYM     H AL+VFW E  H +L  RC    CIW 
Subjt:  CFASPL----EHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPE-SHMFLSRRCKDNGCIWY

Query:  ARDDGIYLKNVPGNKFELQAKWQ
        A+DDGIY+K +P N+ E   KW+
Subjt:  ARDDGIYLKNVPGNKFELQAKWQ

A0A6J1DPJ1 S-protein homolog1.5e-3050.42Show/hide
Query:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNL-RIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPE-SHMFLSRRCKDNGCIWYARDDGIY
        PL+ W++ V N + ++ TL +HCKSKDDDLG  +L   G++  W FR+N W+TTLYWC+MH  ++ V+ + FW E +H++L+ RCKD  CIW A+DDGIY
Subjt:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNL-RIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPE-SHMFLSRRCKDNGCIWYARDDGIY

Query:  LKNVPGNKFELQAKWQPGL
        L+N+P N  EL  KW   L
Subjt:  LKNVPGNKFELQAKWQPGL

A0A6J1ESI0 S-protein homolog4.5e-3051.2Show/hide
Query:  MVESCFASPLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYA
        M ESCFA   + W ++VFNDM   +TL +HCKSKDDDLG+Q L++G    W FR N+W TTL+WC +++ H H ALEVF     + L  RC    CIW  
Subjt:  MVESCFASPLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYA

Query:  RDDGIYLKN-VPGNKFELQAKWQPG
        RDDGIY++N    N +EL AKW+ G
Subjt:  RDDGIYLKN-VPGNKFELQAKWQPG

A0A6P4ABD6 S-protein homolog3.8e-2949.57Show/hide
Query:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPES-HMFLSRRCKDNGCIWYARDDGIYL
        PL  +++ + N + S + L +HC+SKDDDLG+ NL  G  F+W FR N W TT +WCY    + H A +VFWPE  H +L  RC    CIW A+DDG YL
Subjt:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPES-HMFLSRRCKDNGCIWYARDDGIYL

Query:  KNVPGNKFELQAKWQPG
        +NVP N+ EL  KW+PG
Subjt:  KNVPGNKFELQAKWQPG

A0A6P4ACY4 S-protein homolog2.2e-2951.35Show/hide
Query:  VQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNK
        V + N +   + L  HCKSKDDDLG+ NL +G++FSW FR N ++TTLYWCY H  H H A  V+W +   +L  RC +  CIW A+DDG YLKN+P N+
Subjt:  VQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNK

Query:  FELQAKWQPGL
         EL  KW+ GL
Subjt:  FELQAKWQPGL

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 65.5e-0936.45Show/hide
Query:  VQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNK
        V ++ND  +   L +HCKS+DDD G   L+ G  + W F VN   +TLY+C    +   V   VF     +  S RC++  C W A++DGIY       K
Subjt:  VQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNVPGNK

Query:  FELQAKW
          L  KW
Subjt:  FELQAKW

F4JLQ5 S-protein homolog 22.0e-1129.91Show/hide
Query:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLK
        P    +V++ ND+ +  TL  HCKSKDDDLG + L+ GE +S+ F    +  TLY+C     +   + +++          +C+ + C+W  R +G    
Subjt:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLK

Query:  NVPGNKFELQAKWQPGL
        N    +F+L   W   L
Subjt:  NVPGNKFELQAKWQPGL

F4JLS0 S-protein homolog 17.9e-2440.87Show/hide
Query:  LEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKN
        +  W V V N + + +TL +HCKSK+DDLG+ NL+   +FSW F  N+  +T +WCYM+  + H+ + VFW +  + L  RC    CIW A+ DG+YL N
Subjt:  LEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKN

Query:  VPGNKFELQAKWQPG
            +  L  KW+ G
Subjt:  VPGNKFELQAKWQPG

P0DN92 S-protein homolog 243.2e-0940.74Show/hide
Query:  LSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWC-YMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIY
        L +HCKS+DDDLG   L  GE F W+F VN   +TLY+C +   Q      E++      +   RC +  C W A  DGIY
Subjt:  LSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWC-YMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIY

Q2HQ46 S-protein homolog 748.8e-2340Show/hide
Query:  LEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKN
        +  W V V N + + +TL +HCKSK++DLG  NL+  ++FSW F  N+  +TL+WCYM     H+ ++VFW +  + L  RC    C+W A++DG+YL N
Subjt:  LEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKN

Query:  VPGNKFELQAKWQPG
            +  L  KW+ G
Subjt:  VPGNKFELQAKWQPG

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family5.1e-1033.33Show/hide
Query:  SVQVFNDM--QSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCI-WYARDDGIY
        ++ V N++  ++   L +HCKSK++D+G + L+IGE  S+ F+ N W TT +WC ++    +         ++  +    KD     W ARDDGIY
Subjt:  SVQVFNDM--QSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCI-WYARDDGIY

AT4G16195.1 Plant self-incompatibility protein S1 family1.4e-1229.91Show/hide
Query:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLK
        P    +V++ ND+ +  TL  HCKSKDDDLG + L+ GE +S+ F    +  TLY+C     +   + +++          +C+ + C+W  R +G    
Subjt:  PLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLK

Query:  NVPGNKFELQAKWQPGL
        N    +F+L   W   L
Subjt:  NVPGNKFELQAKWQPGL

AT4G16295.1 S-protein homologue 15.6e-2540.87Show/hide
Query:  LEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKN
        +  W V V N + + +TL +HCKSK+DDLG+ NL+   +FSW F  N+  +T +WCYM+  + H+ + VFW +  + L  RC    CIW A+ DG+YL N
Subjt:  LEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKN

Query:  VPGNKFELQAKWQPG
            +  L  KW+ G
Subjt:  VPGNKFELQAKWQPG

AT4G29035.1 Plant self-incompatibility protein S1 family6.2e-2440Show/hide
Query:  LEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKN
        +  W V V N + + +TL +HCKSK++DLG  NL+  ++FSW F  N+  +TL+WCYM     H+ ++VFW +  + L  RC    C+W A++DG+YL N
Subjt:  LEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKN

Query:  VPGNKFELQAKWQPG
            +  L  KW+ G
Subjt:  VPGNKFELQAKWQPG

AT5G04350.1 Plant self-incompatibility protein S1 family1.9e-1236.97Show/hide
Query:  VQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMH---NQHSH---VALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLK
        V + N ++  + L +HC+SKDDDLG+  L+IG+ + + F  N+WQTT + C M    N   H   VA E  W ++   L   CK     W  R+DGIY  
Subjt:  VQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMH---NQHSH---VALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLK

Query:  --NVPGNKFELQAKWQPGL
           VP  K     K+Q G+
Subjt:  --NVPGNKFELQAKWQPGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAATCATGCTTTGCATCTCCACTCGAGCATTGGAGCGTGCAGGTATTTAACGACATGCAAAGTCATCAAACTCTATCTCTTCATTGTAAGTCGAAAGACGACGA
TTTGGGACAGCAAAATCTCCGGATCGGGGAGCAATTTTCATGGAGATTTAGAGTGAATTTGTGGCAGACCACATTGTATTGGTGCTACATGCACAACCAACATAGCCATG
TTGCTCTAGAGGTATTTTGGCCAGAGTCGCACATGTTTCTTTCTCGTAGATGCAAGGACAATGGTTGCATTTGGTACGCTCGAGATGATGGAATTTATTTGAAAAATGTT
CCTGGGAATAAGTTTGAGCTTCAAGCTAAGTGGCAGCCCGGCTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAATCATGCTTTGCATCTCCACTCGAGCATTGGAGCGTGCAGGTATTTAACGACATGCAAAGTCATCAAACTCTATCTCTTCATTGTAAGTCGAAAGACGACGA
TTTGGGACAGCAAAATCTCCGGATCGGGGAGCAATTTTCATGGAGATTTAGAGTGAATTTGTGGCAGACCACATTGTATTGGTGCTACATGCACAACCAACATAGCCATG
TTGCTCTAGAGGTATTTTGGCCAGAGTCGCACATGTTTCTTTCTCGTAGATGCAAGGACAATGGTTGCATTTGGTACGCTCGAGATGATGGAATTTATTTGAAAAATGTT
CCTGGGAATAAGTTTGAGCTTCAAGCTAAGTGGCAGCCCGGCTTGTAG
Protein sequenceShow/hide protein sequence
MVESCFASPLEHWSVQVFNDMQSHQTLSLHCKSKDDDLGQQNLRIGEQFSWRFRVNLWQTTLYWCYMHNQHSHVALEVFWPESHMFLSRRCKDNGCIWYARDDGIYLKNV
PGNKFELQAKWQPGL