; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027314 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027314
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionC-type lectin domain family 4 member F
Genome locationscaffold373:2889152..2892300
RNA-Seq ExpressionMS027314
SyntenyMS027314
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ROL48290.1 UPF0612 protein, partial [Anabarilius grahami]3.6e-0959.42Show/hide
Query:  LNKRLQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKSDFKDVKSMLQ
        +   LQ I+  L  + SE RD+KSE RDMKSE R +KSELRD+KSELRD+KSE RD+KS+ + +KS LQ
Subjt:  LNKRLQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKSDFKDVKSMLQ

ROL48916.1 C-type lectin domain family 4 member F [Anabarilius grahami]5.0e-1147.27Show/hide
Query:  TTNNRNPLERVSPPITSSVVGNVERVVGDEE--DAQSHL--LNKRLQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKS
        +T    P + ++    S VV + E V   EE  D +S L  +   L+ I+  L  + SE RD+KSE RD+KSE RD+KSELRD+KSELRD+KSE RD+KS
Subjt:  TTNNRNPLERVSPPITSSVVGNVERVVGDEE--DAQSHL--LNKRLQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKS

Query:  DFKDVKSMLQ
        + +D+KS L+
Subjt:  DFKDVKSMLQ

ROL48928.1 Motile sperm domain-containing protein 2, partial [Anabarilius grahami]8.0e-0952.5Show/hide
Query:  DEEDAQSHLLNKR--LQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKSDFKDVKSMLQ
        D  D +S L +++  L+ ++  L  + SE RD KS+ RD KS+ RDMKS+LRD KS+LRDMKS+ RDMKSD +D KS L+
Subjt:  DEEDAQSHLLNKR--LQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKSDFKDVKSMLQ

ROL55003.1 Epidermal growth factor receptor substrate 15-like 1, partial [Anabarilius grahami]3.3e-1055.84Show/hide
Query:  DAQSHL--LNKRLQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKSDFKDVKSMLQ
        D +S L  +   L+ I+  L  + SE RD+KSE RD+KSE RD+KSELRD+KSELRD+KSE RD+KS+ +D+KS L+
Subjt:  DAQSHL--LNKRLQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKSDFKDVKSMLQ

XP_022157199.1 uncharacterized protein LOC111023969 [Momordica charantia]5.5e-2694.2Show/hide
Query:  SLTLTITHPLVESEAERLYREAPFDGRAAMEENTTGGRISDHDDRQASPEGLDHDGFDEDAEFDQPIGT
        S  LTITHPLVESEAERLYREAPFDGRAAMEENTTGGRISDHDDRQASPE LDHDGFDEDA+FDQPIGT
Subjt:  SLTLTITHPLVESEAERLYREAPFDGRAAMEENTTGGRISDHDDRQASPEGLDHDGFDEDAEFDQPIGT

TrEMBL top hitse value%identityAlignment
A0A3N0YQM9 UPF0612 protein (Fragment)1.7e-0959.42Show/hide
Query:  LNKRLQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKSDFKDVKSMLQ
        +   LQ I+  L  + SE RD+KSE RDMKSE R +KSELRD+KSELRD+KSE RD+KS+ + +KS LQ
Subjt:  LNKRLQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKSDFKDVKSMLQ

A0A3N0YRT4 C-type lectin domain family 4 member F2.4e-1147.27Show/hide
Query:  TTNNRNPLERVSPPITSSVVGNVERVVGDEE--DAQSHL--LNKRLQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKS
        +T    P + ++    S VV + E V   EE  D +S L  +   L+ I+  L  + SE RD+KSE RD+KSE RD+KSELRD+KSELRD+KSE RD+KS
Subjt:  TTNNRNPLERVSPPITSSVVGNVERVVGDEE--DAQSHL--LNKRLQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKS

Query:  DFKDVKSMLQ
        + +D+KS L+
Subjt:  DFKDVKSMLQ

A0A3N0YT93 Motile sperm domain-containing protein 2 (Fragment)3.9e-0952.5Show/hide
Query:  DEEDAQSHLLNKR--LQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKSDFKDVKSMLQ
        D  D +S L +++  L+ ++  L  + SE RD KS+ RD KS+ RDMKS+LRD KS+LRDMKS+ RDMKSD +D KS L+
Subjt:  DEEDAQSHLLNKR--LQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKSDFKDVKSMLQ

A0A3N0Z9G0 Epidermal growth factor receptor substrate 15-like 1 (Fragment)1.6e-1055.84Show/hide
Query:  DAQSHL--LNKRLQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKSDFKDVKSMLQ
        D +S L  +   L+ I+  L  + SE RD+KSE RD+KSE RD+KSELRD+KSELRD+KSE RD+KS+ +D+KS L+
Subjt:  DAQSHL--LNKRLQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMKSDFKDVKSMLQ

A0A6J1DSS5 uncharacterized protein LOC1110239692.7e-2694.2Show/hide
Query:  SLTLTITHPLVESEAERLYREAPFDGRAAMEENTTGGRISDHDDRQASPEGLDHDGFDEDAEFDQPIGT
        S  LTITHPLVESEAERLYREAPFDGRAAMEENTTGGRISDHDDRQASPE LDHDGFDEDA+FDQPIGT
Subjt:  SLTLTITHPLVESEAERLYREAPFDGRAAMEENTTGGRISDHDDRQASPEGLDHDGFDEDAEFDQPIGT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCGATTCACGGTGGTCTCTTGGTTTCATTAACGCTGACGATTACTCATCCACTCGTGGAGTCTGAGGCAGAACGGTTGTATCGGGAGGCTCCATTCGATGGAAG
AGCTGCAATGGAGGAGAATACAACAGGGGGTAGAATCTCAGATCATGACGATCGGCAGGCTTCTCCCGAGGGGCTCGATCATGATGGATTTGATGAGGATGCCGAGTTCG
ACCAACCTATCGGAACCCACATGGATATGGATGTAGATCGGCCAGTGGAGGAAGACACATTGGAGATGTTGCCAATAGCATCAACATCCGAACAGATTAAAGAGACAATT
AATCAGGTGCCACGTTCAGTGATGGCTCCTACCCCATCACAGCCCACGACTAATAATCGAAACCCCCTAGAAAGAGTTTCACCTCCAATAACATCGTCAGTAGTAGGCAA
TGTTGAACGCGTGGTTGGAGACGAGGAGGATGCACAAAGCCATTTATTGAATAAGCGTTTGCAGTACATTGAGAAAAGCTTGAATAGCTTGACGTCCGAGTTCAGGGACA
TGAAGTCCGAGTTCAGGGACATGAAGTCCGAGTTCAGGGACATGAAGTCAGAGTTGAGGGACATGAAATCAGAGTTGAGGGACATGAAGTCAGAGTTCAGGGACATGAAG
TCAGATTTCAAGGACGTGAAATCCATGCTACAGTTTTTGTGCAAGGGTAGGAACACAGATGATGACAACTCGGTAGATCCACATAGCGACGTTGGGGTACACTTTGCACC
GACGACTGATGACACTCCAAATAATGATGCTGTTGGAGATGACCATGCAGGAGAATGTGCAACTGGAGATGACACTTTTGACACTCGACTTATTATAGACGACACTACAG
ATAATGAACCAATGCCCTCTCCTCTAACTACACTAAGCATCGTGCCCTATGTTGATCCTATCCATTTGTTGTGTTGTCGTGGTAAGATCCCTTACATTCCTTTCGACCCT
TCTCCCCACACCCATCTCGACCATACCACATCCAACCGGATCACTGACCCCGTCAAGTCCTCCACATCCAGGAAAGGTGTACCAGATGATACCACATGTCATCCCGTGAT
TGTACCCGATCATTCGACCTCGTTGAAACAAGCTGAACCACCACACACCACACCTGCTAACCTGACTGAGAGCAACCACCTTTCACACGTTCTCATTACCCCTCCAGTAG
TGACCTCCCCGCCCTCTATAAACGGCCGTGTCCAATCATCCCCATCCAATAAAGCCGATCCACATGATACCACGAAAGATTCCATTGTCGAAACTATCGAATCAACCCCA
CCTAATCAAACCCAACGGTCCACCCAGAGTCTCACTAACCCACTCGTACATACCAAATCTGCCCCAACTAAACGATCCCAACCCACTAACCAAACCACGCAGACTCACCA
TACAACTACAGATGACAGCAAGGTCGAGACACCAAAAGTTGATGCATTTCGCAAGGGAAGTCGAAAAAGAAAGGAAAAGCAACCCTGGACTCTCACTGTGTCTAAGGACC
ATAAATCACAGCAGGTGGAGGTTGAGTTGGATGATGAGAAAAAAAGGCATTGCAAGGTCAGACAGCTGTTATACTCCACCCAAAGTAGGTTACGTATGAACGAGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCGATTCACGGTGGTCTCTTGGTTTCATTAACGCTGACGATTACTCATCCACTCGTGGAGTCTGAGGCAGAACGGTTGTATCGGGAGGCTCCATTCGATGGAAG
AGCTGCAATGGAGGAGAATACAACAGGGGGTAGAATCTCAGATCATGACGATCGGCAGGCTTCTCCCGAGGGGCTCGATCATGATGGATTTGATGAGGATGCCGAGTTCG
ACCAACCTATCGGAACCCACATGGATATGGATGTAGATCGGCCAGTGGAGGAAGACACATTGGAGATGTTGCCAATAGCATCAACATCCGAACAGATTAAAGAGACAATT
AATCAGGTGCCACGTTCAGTGATGGCTCCTACCCCATCACAGCCCACGACTAATAATCGAAACCCCCTAGAAAGAGTTTCACCTCCAATAACATCGTCAGTAGTAGGCAA
TGTTGAACGCGTGGTTGGAGACGAGGAGGATGCACAAAGCCATTTATTGAATAAGCGTTTGCAGTACATTGAGAAAAGCTTGAATAGCTTGACGTCCGAGTTCAGGGACA
TGAAGTCCGAGTTCAGGGACATGAAGTCCGAGTTCAGGGACATGAAGTCAGAGTTGAGGGACATGAAATCAGAGTTGAGGGACATGAAGTCAGAGTTCAGGGACATGAAG
TCAGATTTCAAGGACGTGAAATCCATGCTACAGTTTTTGTGCAAGGGTAGGAACACAGATGATGACAACTCGGTAGATCCACATAGCGACGTTGGGGTACACTTTGCACC
GACGACTGATGACACTCCAAATAATGATGCTGTTGGAGATGACCATGCAGGAGAATGTGCAACTGGAGATGACACTTTTGACACTCGACTTATTATAGACGACACTACAG
ATAATGAACCAATGCCCTCTCCTCTAACTACACTAAGCATCGTGCCCTATGTTGATCCTATCCATTTGTTGTGTTGTCGTGGTAAGATCCCTTACATTCCTTTCGACCCT
TCTCCCCACACCCATCTCGACCATACCACATCCAACCGGATCACTGACCCCGTCAAGTCCTCCACATCCAGGAAAGGTGTACCAGATGATACCACATGTCATCCCGTGAT
TGTACCCGATCATTCGACCTCGTTGAAACAAGCTGAACCACCACACACCACACCTGCTAACCTGACTGAGAGCAACCACCTTTCACACGTTCTCATTACCCCTCCAGTAG
TGACCTCCCCGCCCTCTATAAACGGCCGTGTCCAATCATCCCCATCCAATAAAGCCGATCCACATGATACCACGAAAGATTCCATTGTCGAAACTATCGAATCAACCCCA
CCTAATCAAACCCAACGGTCCACCCAGAGTCTCACTAACCCACTCGTACATACCAAATCTGCCCCAACTAAACGATCCCAACCCACTAACCAAACCACGCAGACTCACCA
TACAACTACAGATGACAGCAAGGTCGAGACACCAAAAGTTGATGCATTTCGCAAGGGAAGTCGAAAAAGAAAGGAAAAGCAACCCTGGACTCTCACTGTGTCTAAGGACC
ATAAATCACAGCAGGTGGAGGTTGAGTTGGATGATGAGAAAAAAAGGCATTGCAAGGTCAGACAGCTGTTATACTCCACCCAAAGTAGGTTACGTATGAACGAGGGATGA
Protein sequenceShow/hide protein sequence
MGSIHGGLLVSLTLTITHPLVESEAERLYREAPFDGRAAMEENTTGGRISDHDDRQASPEGLDHDGFDEDAEFDQPIGTHMDMDVDRPVEEDTLEMLPIASTSEQIKETI
NQVPRSVMAPTPSQPTTNNRNPLERVSPPITSSVVGNVERVVGDEEDAQSHLLNKRLQYIEKSLNSLTSEFRDMKSEFRDMKSEFRDMKSELRDMKSELRDMKSEFRDMK
SDFKDVKSMLQFLCKGRNTDDDNSVDPHSDVGVHFAPTTDDTPNNDAVGDDHAGECATGDDTFDTRLIIDDTTDNEPMPSPLTTLSIVPYVDPIHLLCCRGKIPYIPFDP
SPHTHLDHTTSNRITDPVKSSTSRKGVPDDTTCHPVIVPDHSTSLKQAEPPHTTPANLTESNHLSHVLITPPVVTSPPSINGRVQSSPSNKADPHDTTKDSIVETIESTP
PNQTQRSTQSLTNPLVHTKSAPTKRSQPTNQTTQTHHTTTDDSKVETPKVDAFRKGSRKRKEKQPWTLTVSKDHKSQQVEVELDDEKKRHCKVRQLLYSTQSRLRMNEG