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MS027315 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027315
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold373:2893541..2893846
RNA-Seq ExpressionMS027315
SyntenyMS027315
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158489.1 uncharacterized protein LOC111024968 [Momordica charantia]3.4e-0638.3Show/hide
Query:  MMSTHEQLSPLLSEVLAIREGVQLVKHLQVSWIVVESNSPEAIWAINGTTVWQNEAKTWFLDIQQIAAHFESINSVYHQRISNALTHLLARNAV
        M+  H   +PLL+++LAIREG+ L   L V  +VVE++S EA+  I   + W+ EA +W  DI+  A  F+ I   +  R SNA+ + L R  +
Subjt:  MMSTHEQLSPLLSEVLAIREGVQLVKHLQVSWIVVESNSPEAIWAINGTTVWQNEAKTWFLDIQQIAAHFESINSVYHQRISNALTHLLARNAV
TrEMBL top hitse value%identityAlignment
A0A6J1DZK3 uncharacterized protein LOC1110249681.6e-0638.3Show/hide
Query:  MMSTHEQLSPLLSEVLAIREGVQLVKHLQVSWIVVESNSPEAIWAINGTTVWQNEAKTWFLDIQQIAAHFESINSVYHQRISNALTHLLARNAV
        M+  H   +PLL+++LAIREG+ L   L V  +VVE++S EA+  I   + W+ EA +W  DI+  A  F+ I   +  R SNA+ + L R  +
Subjt:  MMSTHEQLSPLLSEVLAIREGVQLVKHLQVSWIVVESNSPEAIWAINGTTVWQNEAKTWFLDIQQIAAHFESINSVYHQRISNALTHLLARNAV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCTACCCATGAACAGCTCTCCCCTCTTCTATCAGAAGTCCTTGCAATTCGAGAGGGTGTGCAACTGGTCAAACATTTGCAAGTGTCGTGGATTGTTGTTGAATC
AAACTCTCCGGAAGCAATTTGGGCCATCAATGGCACAACGGTTTGGCAAAATGAAGCGAAAACCTGGTTCCTGGACATCCAACAAATTGCTGCCCATTTTGAATCGATAA
ATTCTGTGTATCACCAGAGAATTTCTAATGCTTTGACGCATTTGCTTGCCAGAAATGCAGTTCGTAGGTCTTCTTCTATTCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGTCTACCCATGAACAGCTCTCCCCTCTTCTATCAGAAGTCCTTGCAATTCGAGAGGGTGTGCAACTGGTCAAACATTTGCAAGTGTCGTGGATTGTTGTTGAATC
AAACTCTCCGGAAGCAATTTGGGCCATCAATGGCACAACGGTTTGGCAAAATGAAGCGAAAACCTGGTTCCTGGACATCCAACAAATTGCTGCCCATTTTGAATCGATAA
ATTCTGTGTATCACCAGAGAATTTCTAATGCTTTGACGCATTTGCTTGCCAGAAATGCAGTTCGTAGGTCTTCTTCTATTCTCTAG
Protein sequenceShow/hide protein sequence
MMSTHEQLSPLLSEVLAIREGVQLVKHLQVSWIVVESNSPEAIWAINGTTVWQNEAKTWFLDIQQIAAHFESINSVYHQRISNALTHLLARNAVRRSSSIL