; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027319 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027319
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBeta-galactosidase
Genome locationscaffold373:3155404..3155844
RNA-Seq ExpressionMS027319
SyntenyMS027319
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005773 - vacuole (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR001944 - Glycoside hydrolase, family 35
IPR008979 - Galactose-binding-like domain superfamily
IPR025300 - Beta-galactosidase jelly roll domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050887.1 beta-galactosidase 15-like [Cucumis melo var. makuwa]1.8e-4572.39Show/hide
Query:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI
        F T ++NSQT MF+K QN+KENAQ SW W  +PMRDTLQGKGTFKAN LL     +VD +DYLWYMT +++NTTSSLQNV+L+VNTKGH+LHA+VNRRYI
Subjt:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI

Query:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG
        GS  RN+GQSFVFEK IL+K GTN ITLLSATVG
Subjt:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG

TYK10239.1 beta-galactosidase 15-like [Cucumis melo var. makuwa]2.4e-4571.64Show/hide
Query:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI
        F T ++NSQT MF+K QN+KENAQ SW W  +PMRDTLQGKGTFKAN LL     +VD +DYLWYMT +++NTTSSLQN++L+VNTKGH+LHA+VNRRYI
Subjt:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI

Query:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG
        GS  RN+GQSFVFEK IL+K GTN ITLLSATVG
Subjt:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG

XP_008451143.1 PREDICTED: beta-galactosidase 15-like [Cucumis melo]2.4e-4571.64Show/hide
Query:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI
        F T ++NSQT MF+K QN+KENAQ SW W  +PMRDTLQGKGTFKAN LL     +VD +DYLWYMT +++NTTSSLQN++L+VNTKGH+LHA+VNRRYI
Subjt:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI

Query:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG
        GS  RN+GQSFVFEK IL+K GTN ITLLSATVG
Subjt:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG

XP_038893262.1 beta-galactosidase 7-like [Benincasa hispida]9.2e-4571.64Show/hide
Query:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI
        + T +VNSQ  MF+KE+NEKEN QLSW+W ++PMRDTLQGKGTFKAN LL     +VD +DYLWYMT VE+N TSSLQN++L+VNTKGHVLHA++N RYI
Subjt:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI

Query:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG
        GS  R+DGQSFVFEK ILLK GTN +TLLSATVG
Subjt:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG

XP_038896535.1 beta-galactosidase 15-like [Benincasa hispida]6.3e-4674.63Show/hide
Query:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI
        F T ++NSQT MF+K QNEKENAQLSW W  +PMRDTLQGKGTF AN LL     +VD +DYLWYMT VETN+TSSLQNV+L+VNTKGHVLHA+VNRRYI
Subjt:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI

Query:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG
        GS   ++GQSFVFEK ILLK+GTN ITLLSATVG
Subjt:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG

TrEMBL top hitse value%identityAlignment
A0A1S3AUN1 Beta-galactosidase7.6e-4572.39Show/hide
Query:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKANLLTTVD-VSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI
        + T +VNSQT MF+KEQNEKENAQLSWTW  +PM+DTLQG G F ANLL     V+VD +DY WYMTKV+T+ TSSLQNV+L+VNTKGHVLHA+VN+RYI
Subjt:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKANLLTTVD-VSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI

Query:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG
        GS  +++GQSFVFEK ILLK GTN ITLLSATVG
Subjt:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG

A0A1S3BQ87 Beta-galactosidase1.2e-4571.64Show/hide
Query:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI
        F T ++NSQT MF+K QN+KENAQ SW W  +PMRDTLQGKGTFKAN LL     +VD +DYLWYMT +++NTTSSLQN++L+VNTKGH+LHA+VNRRYI
Subjt:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI

Query:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG
        GS  RN+GQSFVFEK IL+K GTN ITLLSATVG
Subjt:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG

A0A5A7U918 Beta-galactosidase8.9e-4672.39Show/hide
Query:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI
        F T ++NSQT MF+K QN+KENAQ SW W  +PMRDTLQGKGTFKAN LL     +VD +DYLWYMT +++NTTSSLQNV+L+VNTKGH+LHA+VNRRYI
Subjt:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI

Query:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG
        GS  RN+GQSFVFEK IL+K GTN ITLLSATVG
Subjt:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG

A0A5A7UJD2 Beta-galactosidase3.8e-4471.64Show/hide
Query:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKANLLTTVD-VSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI
        + T +VNSQT MF+KEQNEKENAQLSW W  +PM+DTLQG G F ANLL     V+VD +DY WYMTKV+T+ TSSLQNV+L+VNTKGHVLHA+VN+RYI
Subjt:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKANLLTTVD-VSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI

Query:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG
        GS  +++GQSFVFEK ILLK GTN ITLLSATVG
Subjt:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG

A0A5D3CJ19 Beta-galactosidase1.2e-4571.64Show/hide
Query:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI
        F T ++NSQT MF+K QN+KENAQ SW W  +PMRDTLQGKGTFKAN LL     +VD +DYLWYMT +++NTTSSLQN++L+VNTKGH+LHA+VNRRYI
Subjt:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYI

Query:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG
        GS  RN+GQSFVFEK IL+K GTN ITLLSATVG
Subjt:  GSHKRNDGQSFVFEKHILLKLGTNIITLLSATVG

SwissProt top hitse value%identityAlignment
P49676 Beta-galactosidase4.2e-1639.57Show/hide
Query:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSK--PMRDTLQGKGTFKA-NLLTTVDVSVDVNDYLWYMTKVETNTTSSL--QNVSLRVNTKGHVLHAYVN
        + T  VN+QT   + E +  E  +L WTW  +    +  L+G G   A  L+   DV+ D +DYLWYMT+V  +    +  +N+SLRV++  HVLHAYVN
Subjt:  FTTPEVNSQTFMFLKEQNEKENAQLSWTWTSK--PMRDTLQGKGTFKA-NLLTTVDVSVDVNDYLWYMTKVETNTTSSL--QNVSLRVNTKGHVLHAYVN

Query:  RRYIGSHKRNDGQ-SFVFEKHILLKLGTNIITLLSATVG
         +Y+G+    D +  + FEK + L  GTN + LLS +VG
Subjt:  RRYIGSHKRNDGQ-SFVFEKHILLKLGTNIITLLSATVG

Q7G3T8 Beta-galactosidase 133.3e-1336.62Show/hide
Query:  TMKFTTPEVNSQTFMFLKEQN--EKENAQLSWTWTSKPMRDTL-QGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAY
        T+ F + ++ +QT + +K+ N  EKE   L W+W  + +   +   KG+++ N LL  +  S D +DYLWY T ++    +S    +L VNT GH L+A+
Subjt:  TMKFTTPEVNSQTFMFLKEQN--EKENAQLSWTWTSKPMRDTL-QGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAY

Query:  VNRRYIGSHKRNDGQSFVFEKHILLKL--GTNIITLLSATVG
        VN   +G +   +G  FVF+    +KL  G N I+LLSAT+G
Subjt:  VNRRYIGSHKRNDGQSFVFEKHILLKL--GTNIITLLSATVG

Q8RUV9 Beta-galactosidase 16.6e-1438.73Show/hide
Query:  TMKFTTPEVNSQTFMFLKEQN--EKENAQLSWTWTSKPMRDTL-QGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAY
        T+ F + ++ +QT + +K+ N  E+E   L W+W  + +   +   KG F+ N LL  +  S D +DYLWY T +      S +   L VNT GH L+A+
Subjt:  TMKFTTPEVNSQTFMFLKEQN--EKENAQLSWTWTSKPMRDTL-QGKGTFKAN-LLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAY

Query:  VNRRYIGSHKRNDGQSFVFEKHILLKL--GTNIITLLSATVG
        VN + IG +   DG  FVF+    +KL  G N I+LLSATVG
Subjt:  VNRRYIGSHKRNDGQSFVFEKHILLKL--GTNIITLLSATVG

Q9C6W4 Beta-galactosidase 157.6e-1839.86Show/hide
Query:  TMKFTTPEVNSQTFMFLKEQNEKEN--AQLSWTWTSKPMRDT-LQGKG-TFKANLLTTVDVSVDVNDYLWYMTKVETNTTSSL--QNVSLRVNTKGHVLH
        T  + T ++N+QT + +K+ NE EN  + L W+W  + +    L+GKG +    L     VS D +DYLWYMT V       +  +N+SLR+N+  HVLH
Subjt:  TMKFTTPEVNSQTFMFLKEQNEKEN--AQLSWTWTSKPMRDT-LQGKG-TFKANLLTTVDVSVDVNDYLWYMTKVETNTTSSL--QNVSLRVNTKGHVLH

Query:  AYVNRRYIGSHKRNDGQ-SFVFEKHILLKLGTNIITLLSATVG
        A+VN ++IG+++  +G+  +VFE+      G N+ITLLS TVG
Subjt:  AYVNRRYIGSHKRNDGQ-SFVFEKHILLKLGTNIITLLSATVG

Q9SCV5 Beta-galactosidase 72.7e-1538.85Show/hide
Query:  FTTPEVNSQTFMFLKEQNEKENAQLSWTW-TSKPMRDTLQGKGTFKA-NLLTTVDVSVDVNDYLWYMTKVETNTTSSL--QNVSLRVNTKGHVLHAYVNR
        + T +VN+QT +  ++ ++ E  +L WTW      +  L+G G   A  L+   DV+ D +DYLWYMT++  +    L  +N++LRV++  HVLHAYVN 
Subjt:  FTTPEVNSQTFMFLKEQNEKENAQLSWTW-TSKPMRDTLQGKGTFKA-NLLTTVDVSVDVNDYLWYMTKVETNTTSSL--QNVSLRVNTKGHVLHAYVNR

Query:  RYIGSHKRNDGQ-SFVFEKHI-LLKLGTNIITLLSATVG
        +Y+G+    DG+  + FE+ +  L  GTN I+LLS +VG
Subjt:  RYIGSHKRNDGQ-SFVFEKHI-LLKLGTNIITLLSATVG

Arabidopsis top hitse value%identityAlignment
AT1G31740.1 beta-galactosidase 155.4e-1939.86Show/hide
Query:  TMKFTTPEVNSQTFMFLKEQNEKEN--AQLSWTWTSKPMRDT-LQGKG-TFKANLLTTVDVSVDVNDYLWYMTKVETNTTSSL--QNVSLRVNTKGHVLH
        T  + T ++N+QT + +K+ NE EN  + L W+W  + +    L+GKG +    L     VS D +DYLWYMT V       +  +N+SLR+N+  HVLH
Subjt:  TMKFTTPEVNSQTFMFLKEQNEKEN--AQLSWTWTSKPMRDT-LQGKG-TFKANLLTTVDVSVDVNDYLWYMTKVETNTTSSL--QNVSLRVNTKGHVLH

Query:  AYVNRRYIGSHKRNDGQ-SFVFEKHILLKLGTNIITLLSATVG
        A+VN ++IG+++  +G+  +VFE+      G N+ITLLS TVG
Subjt:  AYVNRRYIGSHKRNDGQ-SFVFEKHILLKLGTNIITLLSATVG

AT1G45130.1 beta-galactosidase 51.5e-0835.92Show/hide
Query:  TLQGKGTFKA-NLLTTVDVSVDVNDYLWYMTKVETNTTSSLQN----VSLRVNTKGHVLHAYVNRRYIGS-HKRNDGQSFVFEKHILLKLGTNIITLLSA
        T   +GT  A  LL  V+V+ D  DYLWY T V+   + S        +L V++ GH +H +VN  + GS     + + F F   + L+ G N I LLS 
Subjt:  TLQGKGTFKA-NLLTTVDVSVDVNDYLWYMTKVETNTTSSLQN----VSLRVNTKGHVLHAYVNRRYIGS-HKRNDGQSFVFEKHILLKLGTNIITLLSA

Query:  TVG
         VG
Subjt:  TVG

AT2G04060.1 glycosyl hydrolase family 35 protein7.1e-1142.17Show/hide
Query:  DVSVDVNDYLWYMTKVETNTTSSL--QNVSLRVNTKGHVLHAYVNRRYIGSHKRNDGQ-SFVFEKHILLKLGTNIITLLSATV
        +VS D +D+LWYMT V          +N+SLR+N+  HVLH +VN ++ G+++  +G+  +VFE+      G N+ITLLS TV
Subjt:  DVSVDVNDYLWYMTKVETNTTSSL--QNVSLRVNTKGHVLHAYVNRRYIGSHKRNDGQ-SFVFEKHILLKLGTNIITLLSATV

AT5G20710.1 beta-galactosidase 71.9e-1638.85Show/hide
Query:  FTTPEVNSQTFMFLKEQNEKENAQLSWTW-TSKPMRDTLQGKGTFKA-NLLTTVDVSVDVNDYLWYMTKVETNTTSSL--QNVSLRVNTKGHVLHAYVNR
        + T +VN+QT +  ++ ++ E  +L WTW      +  L+G G   A  L+   DV+ D +DYLWYMT++  +    L  +N++LRV++  HVLHAYVN 
Subjt:  FTTPEVNSQTFMFLKEQNEKENAQLSWTW-TSKPMRDTLQGKGTFKA-NLLTTVDVSVDVNDYLWYMTKVETNTTSSL--QNVSLRVNTKGHVLHAYVNR

Query:  RYIGSHKRNDGQ-SFVFEKHI-LLKLGTNIITLLSATVG
        +Y+G+    DG+  + FE+ +  L  GTN I+LLS +VG
Subjt:  RYIGSHKRNDGQ-SFVFEKHI-LLKLGTNIITLLSATVG

AT5G63810.1 beta-galactosidase 108.6e-0930.56Show/hide
Query:  TMKFTTPEVNSQTF-MFLKEQNEKENAQLSW-TWTSKPMRDTLQGKGTF-KANLLTTVDVSVDVNDYLWYMTKVETNTTSSL----QNVSLRVNTKGHVL
        T  F T +V S++  + +  ++ K ++ L W  ++ KP    + G   F K  L+  ++ + D  DYLWY T +  +   +      +  L + +KGH L
Subjt:  TMKFTTPEVNSQTF-MFLKEQNEKENAQLSW-TWTSKPMRDTLQGKGTF-KANLLTTVDVSVDVNDYLWYMTKVETNTTSSL----QNVSLRVNTKGHVL

Query:  HAYVNRRYIGSHKRNDGQ-SFVFEKHILLKLGTNIITLLSATVG
        H ++N+ Y+G+   N     F  +K + LK G N I LLS TVG
Subjt:  HAYVNRRYIGSHKRNDGQ-SFVFEKHILLKLGTNIITLLSATVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCAACAATGAAGTTTACAACACCAGAGGTTAATTCTCAAACATTTATGTTTCTAAAGGAGCAAAATGAGAAGGAAAATGCACAACTTTCGTGGACTTGGACTTC
AAAGCCCATGAGAGACACTCTACAAGGGAAAGGTACATTTAAGGCAAACCTTCTCACCACTGTTGATGTGAGTGTTGATGTGAACGACTACTTGTGGTATATGACGAAGG
TGGAAACCAATACGACATCTTCTCTTCAAAATGTATCATTGCGAGTGAATACAAAGGGTCATGTGCTTCATGCTTATGTAAATAGAAGGTATATTGGGTCACACAAGAGA
AATGATGGCCAAAGTTTTGTGTTTGAGAAACATATTCTATTGAAATTGGGAACCAACATTATAACCCTTTTGAGTGCTACAGTTGGAAACTTTACGACCCTGACTCAATA
G
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCAACAATGAAGTTTACAACACCAGAGGTTAATTCTCAAACATTTATGTTTCTAAAGGAGCAAAATGAGAAGGAAAATGCACAACTTTCGTGGACTTGGACTTC
AAAGCCCATGAGAGACACTCTACAAGGGAAAGGTACATTTAAGGCAAACCTTCTCACCACTGTTGATGTGAGTGTTGATGTGAACGACTACTTGTGGTATATGACGAAGG
TGGAAACCAATACGACATCTTCTCTTCAAAATGTATCATTGCGAGTGAATACAAAGGGTCATGTGCTTCATGCTTATGTAAATAGAAGGTATATTGGGTCACACAAGAGA
AATGATGGCCAAAGTTTTGTGTTTGAGAAACATATTCTATTGAAATTGGGAACCAACATTATAACCCTTTTGAGTGCTACAGTTGGAAACTTTACGACCCTGACTCAATA
G
Protein sequenceShow/hide protein sequence
MVATMKFTTPEVNSQTFMFLKEQNEKENAQLSWTWTSKPMRDTLQGKGTFKANLLTTVDVSVDVNDYLWYMTKVETNTTSSLQNVSLRVNTKGHVLHAYVNRRYIGSHKR
NDGQSFVFEKHILLKLGTNIITLLSATVGNFTTLTQ